Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.15□□□□□ -2.06
ZBED1O96006 Y_RNA.133-201ENST00000363428 110 ntBASIC2.15□□□□□ -2.07
ZBED1O96006 Y_RNA.368-201ENST00000365547 113 ntBASIC2.15□□□□□ -2.07
ZBED1O96006 RNU2-40P-201ENST00000410833 196 ntBASIC2.15□□□□□ -2.07
ZBED1O96006 AL139156.1-201ENST00000412785 841 ntBASIC2.15□□□□□ -2.07
ZBED1O96006 HMGN2P19-201ENST00000425149 265 ntBASIC2.15□□□□□ -2.07
ZBED1O96006 MTCYBP9-201ENST00000431021 303 ntBASIC2.15□□□□□ -2.07
ZBED1O96006 FTH1P12-201ENST00000432137 551 ntBASIC2.15□□□□□ -2.07
ZBED1O96006 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
ZBED1O96006 AC233266.1-201ENST00000454518 96 ntBASIC2.15□□□□□ -2.07
ZBED1O96006 RNU6-1338P-201ENST00000516328 91 ntBASIC2.15□□□□□ -2.07
ZBED1O96006 RNU1-40P-201ENST00000516816 164 ntBASIC2.15□□□□□ -2.07
ZBED1O96006 RNU2-56P-201ENST00000516826 190 ntBASIC2.15□□□□□ -2.07
ZBED1O96006 RNU1-97P-201ENST00000516872 164 ntBASIC2.15□□□□□ -2.07
ZBED1O96006 SCARNA24.2-201ENST00000516968 130 ntBASIC2.15□□□□□ -2.07
ZBED1O96006 RNU6-1096P-201ENST00000517089 102 ntBASIC2.15□□□□□ -2.07
ZBED1O96006 DEFB108E-201ENST00000524692 240 ntBASIC2.15□□□□□ -2.07
ZBED1O96006 AC015720.1-201ENST00000565251 277 ntBASIC2.15□□□□□ -2.07
ZBED1O96006 AC022217.4-201ENST00000604389 163 ntBASIC2.15□□□□□ -2.07
ZBED1O96006 AC005972.2-201ENST00000604690 348 ntBASIC2.15□□□□□ -2.07
ZBED1O96006 AC004832.4-201ENST00000608952 331 ntBASIC2.15□□□□□ -2.07
ZBED1O96006 AC242852.1-201ENST00000612151 96 ntBASIC2.15□□□□□ -2.07
ZBED1O96006 AC244015.1-201ENST00000622301 99 ntBASIC2.15□□□□□ -2.07
ZBED1O96006 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.15□□□□□ -2.07
ZBED1O96006 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
ZBED1O96006 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
ZBED1O96006 AC092881.1-201ENST00000638218 2733 ntBASIC2.14□□□□□ -2.07
ZBED1O96006 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.14□□□□□ -2.07
ZBED1O96006 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
ZBED1O96006 Y_RNA.16-201ENST00000362421 102 ntBASIC2.14□□□□□ -2.07
ZBED1O96006 RNA5SP160-201ENST00000364866 120 ntBASIC2.14□□□□□ -2.07
ZBED1O96006 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
ZBED1O96006 RN7SKP200-201ENST00000410564 320 ntBASIC2.14□□□□□ -2.07
ZBED1O96006 Y_RNA.621-201ENST00000411065 96 ntBASIC2.14□□□□□ -2.07
ZBED1O96006 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.14□□□□□ -2.07
ZBED1O96006 MTCO1P5-201ENST00000433573 344 ntBASIC2.14□□□□□ -2.07
ZBED1O96006 MTND3P2-201ENST00000438452 342 ntBASIC2.14□□□□□ -2.07
ZBED1O96006 snoU13.27-201ENST00000459278 104 ntBASIC2.14□□□□□ -2.07
ZBED1O96006 RNU7-34P-201ENST00000459394 64 ntBASIC2.14□□□□□ -2.07
ZBED1O96006 MRPS17P9-201ENST00000511924 393 ntBASIC2.14□□□□□ -2.07
ZBED1O96006 RNU6-191P-201ENST00000516295 94 ntBASIC2.14□□□□□ -2.07
ZBED1O96006 RNU6-341P-201ENST00000516973 96 ntBASIC2.14□□□□□ -2.07
ZBED1O96006 MIR4709-201ENST00000577272 72 ntBASIC2.14□□□□□ -2.07
ZBED1O96006 AL162730.1-201ENST00000605734 292 ntBASIC2.14□□□□□ -2.07
ZBED1O96006 Y_RNA.783-201ENST00000613546 102 ntBASIC2.14□□□□□ -2.07
ZBED1O96006 AC068647.2-201ENST00000637380 353 ntBASIC2.14□□□□□ -2.07
ZBED1O96006 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
ZBED1O96006 AL391987.6-201ENST00000305671 199 ntBASIC2.13□□□□□ -2.07
ZBED1O96006 RNU6-414P-201ENST00000363705 104 ntBASIC2.13□□□□□ -2.07
ZBED1O96006 Y_RNA.172-201ENST00000363765 102 ntBASIC2.13□□□□□ -2.07
ZBED1O96006 MIR676-201ENST00000390702 67 ntBASIC2.13□□□□□ -2.07
ZBED1O96006 RNU6-360P-201ENST00000390944 104 ntBASIC2.13□□□□□ -2.07
ZBED1O96006 RNU2-2P-201ENST00000410396 191 ntBASIC2.13□□□□□ -2.07
ZBED1O96006 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.13□□□□□ -2.07
ZBED1O96006 AL606517.2-201ENST00000442855 241 ntBASIC2.13□□□□□ -2.07
ZBED1O96006 RPS27P1-201ENST00000450552 247 ntBASIC2.13□□□□□ -2.07
ZBED1O96006 SERF1AP1-201ENST00000514575 187 ntBASIC2.13□□□□□ -2.07
ZBED1O96006 RNU6-1291P-201ENST00000516591 104 ntBASIC2.13□□□□□ -2.07
ZBED1O96006 AC022254.1-201ENST00000567857 235 ntBASIC2.13□□□□□ -2.07
ZBED1O96006 MIR4298-201ENST00000584380 73 ntBASIC2.13□□□□□ -2.07
ZBED1O96006 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.13□□□□□ -2.07
ZBED1O96006 MIR8054-201ENST00000620877 86 ntBASIC2.13□□□□□ -2.07
ZBED1O96006 uc_338.20-201ENST00000621563 178 ntBASIC2.13□□□□□ -2.07
ZBED1O96006 SNORD114-1-201ENST00000362705 72 ntBASIC2.12□□□□□ -2.07
ZBED1O96006 Y_RNA.310-201ENST00000365063 113 ntBASIC2.12□□□□□ -2.07
ZBED1O96006 Y_RNA.556-201ENST00000384677 113 ntBASIC2.12□□□□□ -2.07
ZBED1O96006 MIR1261-201ENST00000408659 82 ntBASIC2.12□□□□□ -2.07
ZBED1O96006 AP002004.2-201ENST00000531656 154 ntBASIC2.12□□□□□ -2.07
ZBED1O96006 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.12□□□□□ -2.07
ZBED1O96006 AC091178.2-201ENST00000584401 117 ntBASIC2.12□□□□□ -2.07
ZBED1O96006 AL359851.1-201ENST00000569460 4997 ntBASIC2.12□□□□□ -2.07
ZBED1O96006 Y_RNA.265-201ENST00000364677 108 ntBASIC2.11□□□□□ -2.07
ZBED1O96006 SNORA4.2-201ENST00000365313 147 ntBASIC2.11□□□□□ -2.07
ZBED1O96006 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
ZBED1O96006 RNU6-440P-201ENST00000390882 105 ntBASIC2.11□□□□□ -2.07
ZBED1O96006 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.11□□□□□ -2.07
ZBED1O96006 RPS4XP11-201ENST00000446897 772 ntBASIC2.11□□□□□ -2.07
ZBED1O96006 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.11□□□□□ -2.07
ZBED1O96006 AC091959.1-201ENST00000495857 238 ntBASIC2.11□□□□□ -2.07
ZBED1O96006 RNU7-116P-201ENST00000516940 62 ntBASIC2.11□□□□□ -2.07
ZBED1O96006 AC136628.3-201ENST00000521868 290 ntBASIC2.11□□□□□ -2.07
ZBED1O96006 AL161670.1-201ENST00000554348 137 ntBASIC2.11□□□□□ -2.07
ZBED1O96006 SNORA28-201ENST00000606769 126 ntBASIC2.11□□□□□ -2.07
ZBED1O96006 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.11□□□□□ -2.07
ZBED1O96006 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.11□□□□□ -2.07
ZBED1O96006 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.11□□□□□ -2.07
ZBED1O96006 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.11□□□□□ -2.07
ZBED1O96006 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
ZBED1O96006 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
ZBED1O96006 RNU6-661P-201ENST00000362409 107 ntBASIC2.1□□□□□ -2.07
ZBED1O96006 Y_RNA.237-201ENST00000364439 102 ntBASIC2.1□□□□□ -2.07
ZBED1O96006 Y_RNA.288-201ENST00000364854 92 ntBASIC2.1□□□□□ -2.07
ZBED1O96006 RNU6-196P-201ENST00000384315 107 ntBASIC2.1□□□□□ -2.07
ZBED1O96006 Y_RNA.483-201ENST00000384380 101 ntBASIC2.1□□□□□ -2.07
ZBED1O96006 RPL23AP42-201ENST00000471152 471 ntBASIC2.1□□□□□ -2.07
ZBED1O96006 AL162424.1-201ENST00000602325 221 ntBASIC2.1□□□□□ -2.07
ZBED1O96006 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
ZBED1O96006 ZNF355P-201ENST00000427301 3216 ntBASIC2.09□□□□□ -2.07
ZBED1O96006 Y_RNA.396-201ENST00000383949 103 ntBASIC2.09□□□□□ -2.07
ZBED1O96006 MT-TW-201ENST00000387382 68 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 139.9 ms