Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 Y_RNA.229-201ENST00000364347 113 ntBASIC2.98□□□□□ -1.93
VAMP4O75379 RPS15AP28-201ENST00000435088 386 ntBASIC2.98□□□□□ -1.93
VAMP4O75379 AL162725.1-201ENST00000435405 301 ntBASIC2.98□□□□□ -1.93
VAMP4O75379 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.98□□□□□ -1.93
VAMP4O75379 SNORA4.4-201ENST00000515921 135 ntBASIC2.98□□□□□ -1.93
VAMP4O75379 RNA5SP281-201ENST00000516504 135 ntBASIC2.98□□□□□ -1.93
VAMP4O75379 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.98□□□□□ -1.93
VAMP4O75379 AL355297.2-201ENST00000604792 129 ntBASIC2.98□□□□□ -1.93
VAMP4O75379 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.98□□□□□ -1.93
VAMP4O75379 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
VAMP4O75379 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
VAMP4O75379 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
VAMP4O75379 SNORD114-30-201ENST00000364448 72 ntBASIC2.97□□□□□ -1.93
VAMP4O75379 RNU1-51P-201ENST00000365345 176 ntBASIC2.97□□□□□ -1.93
VAMP4O75379 Y_RNA.343-201ENST00000365354 112 ntBASIC2.97□□□□□ -1.93
VAMP4O75379 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
VAMP4O75379 RNU6-220P-201ENST00000390919 107 ntBASIC2.97□□□□□ -1.93
VAMP4O75379 RNA5SP181-201ENST00000410246 98 ntBASIC2.97□□□□□ -1.93
VAMP4O75379 AC107027.2-201ENST00000512197 115 ntBASIC2.97□□□□□ -1.93
VAMP4O75379 RNU6-826P-201ENST00000516827 104 ntBASIC2.97□□□□□ -1.93
VAMP4O75379 RNU6-856P-201ENST00000516959 98 ntBASIC2.97□□□□□ -1.93
VAMP4O75379 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.97□□□□□ -1.93
VAMP4O75379 Y_RNA.778-201ENST00000620203 90 ntBASIC2.97□□□□□ -1.93
VAMP4O75379 AC012640.5-201ENST00000623897 319 ntBASIC2.97□□□□□ -1.93
VAMP4O75379 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC2.97□□□□□ -1.93
VAMP4O75379 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
VAMP4O75379 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
VAMP4O75379 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
VAMP4O75379 Y_RNA.215-201ENST00000364204 112 ntBASIC2.96□□□□□ -1.94
VAMP4O75379 Y_RNA.488-201ENST00000384403 102 ntBASIC2.96□□□□□ -1.94
VAMP4O75379 AL606845.1-201ENST00000404881 255 ntBASIC2.96□□□□□ -1.94
VAMP4O75379 MIR1278-201ENST00000408753 81 ntBASIC2.96□□□□□ -1.94
VAMP4O75379 RNA5SP511-201ENST00000410487 115 ntBASIC2.96□□□□□ -1.94
VAMP4O75379 RNU4-53P-201ENST00000410828 140 ntBASIC2.96□□□□□ -1.94
VAMP4O75379 AC245047.8-201ENST00000456455 284 ntBASIC2.96□□□□□ -1.94
VAMP4O75379 RNU6-1007P-201ENST00000516586 107 ntBASIC2.96□□□□□ -1.94
VAMP4O75379 AC027419.1-201ENST00000522976 328 ntBASIC2.96□□□□□ -1.94
VAMP4O75379 U2.20-201ENST00000613956 192 ntBASIC2.96□□□□□ -1.94
VAMP4O75379 FO624990.1-201ENST00000636373 85 ntBASIC2.96□□□□□ -1.94
VAMP4O75379 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.96□□□□□ -1.94
VAMP4O75379 RNU6-743P-201ENST00000364151 106 ntBASIC2.95□□□□□ -1.94
VAMP4O75379 MT-TT-201ENST00000387460 66 ntBASIC2.95□□□□□ -1.94
VAMP4O75379 RNA5SP496-201ENST00000391240 109 ntBASIC2.95□□□□□ -1.94
VAMP4O75379 RNU6-383P-201ENST00000410864 94 ntBASIC2.95□□□□□ -1.94
VAMP4O75379 RNU6-437P-201ENST00000459408 95 ntBASIC2.95□□□□□ -1.94
VAMP4O75379 RPS27P22-201ENST00000478056 241 ntBASIC2.95□□□□□ -1.94
VAMP4O75379 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.95□□□□□ -1.94
VAMP4O75379 RNU6-63P-201ENST00000516690 95 ntBASIC2.95□□□□□ -1.94
VAMP4O75379 RNU1-104P-201ENST00000517280 175 ntBASIC2.95□□□□□ -1.94
VAMP4O75379 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.95□□□□□ -1.94
VAMP4O75379 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.95□□□□□ -1.94
VAMP4O75379 AC015720.1-201ENST00000565251 277 ntBASIC2.95□□□□□ -1.94
VAMP4O75379 MIR6766-201ENST00000622641 72 ntBASIC2.95□□□□□ -1.94
VAMP4O75379 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
VAMP4O75379 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
VAMP4O75379 MIR340-201ENST00000362125 95 ntBASIC2.94□□□□□ -1.94
VAMP4O75379 RNU1-22P-201ENST00000363334 158 ntBASIC2.94□□□□□ -1.94
VAMP4O75379 SNORA67.1-201ENST00000364749 141 ntBASIC2.94□□□□□ -1.94
VAMP4O75379 Y_RNA.337-201ENST00000365312 102 ntBASIC2.94□□□□□ -1.94
VAMP4O75379 RNU6-728P-201ENST00000365375 104 ntBASIC2.94□□□□□ -1.94
VAMP4O75379 Y_RNA.497-201ENST00000384447 98 ntBASIC2.94□□□□□ -1.94
VAMP4O75379 Y_RNA.568-201ENST00000384742 113 ntBASIC2.94□□□□□ -1.94
VAMP4O75379 AC010409.1-201ENST00000487382 476 ntBASIC2.94□□□□□ -1.94
VAMP4O75379 AC018868.1-201ENST00000491307 315 ntBASIC2.94□□□□□ -1.94
VAMP4O75379 RPL23AP54-201ENST00000495129 419 ntBASIC2.94□□□□□ -1.94
VAMP4O75379 SNORD116-25-201ENST00000516517 92 ntBASIC2.94□□□□□ -1.94
VAMP4O75379 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.94□□□□□ -1.94
VAMP4O75379 NDUFA5P6-201ENST00000542110 379 ntBASIC2.94□□□□□ -1.94
VAMP4O75379 SNORD53-201ENST00000579969 78 ntBASIC2.94□□□□□ -1.94
VAMP4O75379 MIR4658-201ENST00000584344 65 ntBASIC2.94□□□□□ -1.94
VAMP4O75379 DNAJC19P2-201ENST00000593340 302 ntBASIC2.94□□□□□ -1.94
VAMP4O75379 AL590808.1-201ENST00000618696 141 ntBASIC2.94□□□□□ -1.94
VAMP4O75379 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
VAMP4O75379 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
VAMP4O75379 RNU6-151P-201ENST00000364158 107 ntBASIC2.93□□□□□ -1.94
VAMP4O75379 RNA5SP126-201ENST00000365092 109 ntBASIC2.93□□□□□ -1.94
VAMP4O75379 RNU1-138P-201ENST00000384093 164 ntBASIC2.93□□□□□ -1.94
VAMP4O75379 SNORA72-201ENST00000384339 132 ntBASIC2.93□□□□□ -1.94
VAMP4O75379 RNU6-1072P-201ENST00000384703 107 ntBASIC2.93□□□□□ -1.94
VAMP4O75379 RNU6-443P-201ENST00000384780 107 ntBASIC2.93□□□□□ -1.94
VAMP4O75379 MIR524-201ENST00000385242 87 ntBASIC2.93□□□□□ -1.94
VAMP4O75379 RNU6-131P-201ENST00000391144 107 ntBASIC2.93□□□□□ -1.94
VAMP4O75379 RNU4-43P-201ENST00000410628 137 ntBASIC2.93□□□□□ -1.94
VAMP4O75379 AC007064.1-201ENST00000412238 351 ntBASIC2.93□□□□□ -1.94
VAMP4O75379 AL121914.1-201ENST00000450188 156 ntBASIC2.93□□□□□ -1.94
VAMP4O75379 AC097462.1-201ENST00000514125 324 ntBASIC2.93□□□□□ -1.94
VAMP4O75379 RNU6-991P-201ENST00000516168 107 ntBASIC2.93□□□□□ -1.94
VAMP4O75379 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.93□□□□□ -1.94
VAMP4O75379 RNA5SP24-201ENST00000516478 95 ntBASIC2.93□□□□□ -1.94
VAMP4O75379 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.93□□□□□ -1.94
VAMP4O75379 MIR4438-201ENST00000585271 93 ntBASIC2.93□□□□□ -1.94
VAMP4O75379 U6.73-201ENST00000619194 103 ntBASIC2.93□□□□□ -1.94
VAMP4O75379 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.92□□□□□ -1.94
VAMP4O75379 RNU4-13P-201ENST00000364019 141 ntBASIC2.92□□□□□ -1.94
VAMP4O75379 MIR15B-201ENST00000385045 98 ntBASIC2.92□□□□□ -1.94
VAMP4O75379 AL512604.1-201ENST00000404812 257 ntBASIC2.92□□□□□ -1.94
VAMP4O75379 RN7SKP101-201ENST00000411376 320 ntBASIC2.92□□□□□ -1.94
VAMP4O75379 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.92□□□□□ -1.94
VAMP4O75379 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.92□□□□□ -1.94
VAMP4O75379 RNU6-1146P-201ENST00000516282 102 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms