Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 MIR4778-201ENST00000577635 80 ntBASIC3.82□□□□□ -1.8
HOXA2O43364 AL355297.2-201ENST00000604792 129 ntBASIC3.82□□□□□ -1.8
HOXA2O43364 MALAT1.1-201ENST00000618249 95 ntBASIC3.82□□□□□ -1.8
HOXA2O43364 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HOXA2O43364 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
HOXA2O43364 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.82□□□□□ -1.8
HOXA2O43364 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HOXA2O43364 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HOXA2O43364 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.81□□□□□ -1.8
HOXA2O43364 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HOXA2O43364 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.81□□□□□ -1.8
HOXA2O43364 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HOXA2O43364 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HOXA2O43364 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HOXA2O43364 MIR302B-201ENST00000362188 73 ntBASIC3.81□□□□□ -1.8
HOXA2O43364 Y_RNA.265-201ENST00000364677 108 ntBASIC3.81□□□□□ -1.8
HOXA2O43364 RNA5SP173-201ENST00000364857 136 ntBASIC3.81□□□□□ -1.8
HOXA2O43364 MT-TI-201ENST00000387365 69 ntBASIC3.81□□□□□ -1.8
HOXA2O43364 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.81□□□□□ -1.8
HOXA2O43364 RNU1-131P-201ENST00000458943 161 ntBASIC3.81□□□□□ -1.8
HOXA2O43364 RNU7-123P-201ENST00000515911 60 ntBASIC3.81□□□□□ -1.8
HOXA2O43364 RN7SKP12-201ENST00000516275 143 ntBASIC3.81□□□□□ -1.8
HOXA2O43364 MIR2114-201ENST00000516645 80 ntBASIC3.81□□□□□ -1.8
HOXA2O43364 RN7SKP57-201ENST00000517248 293 ntBASIC3.81□□□□□ -1.8
HOXA2O43364 snoMBII-202.2-201ENST00000517263 86 ntBASIC3.81□□□□□ -1.8
HOXA2O43364 MIR4762-201ENST00000585261 75 ntBASIC3.81□□□□□ -1.8
HOXA2O43364 U4.6-201ENST00000621618 127 ntBASIC3.81□□□□□ -1.8
HOXA2O43364 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HOXA2O43364 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HOXA2O43364 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
HOXA2O43364 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.8□□□□□ -1.8
HOXA2O43364 TNPO1P3-201ENST00000436471 2662 ntBASIC3.8□□□□□ -1.8
HOXA2O43364 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HOXA2O43364 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HOXA2O43364 Y_RNA.93-201ENST00000363066 109 ntBASIC3.8□□□□□ -1.8
HOXA2O43364 Y_RNA.107-201ENST00000363190 121 ntBASIC3.8□□□□□ -1.8
HOXA2O43364 SNORA63D-201ENST00000364359 132 ntBASIC3.8□□□□□ -1.8
HOXA2O43364 U8.5-201ENST00000364528 136 ntBASIC3.8□□□□□ -1.8
HOXA2O43364 Y_RNA.547-201ENST00000384654 119 ntBASIC3.8□□□□□ -1.8
HOXA2O43364 MIR561-201ENST00000385216 97 ntBASIC3.8□□□□□ -1.8
HOXA2O43364 SNORD17-201ENST00000390930 237 ntBASIC3.8□□□□□ -1.8
HOXA2O43364 RPL39P25-201ENST00000449384 154 ntBASIC3.8□□□□□ -1.8
HOXA2O43364 RNU7-80P-201ENST00000459562 61 ntBASIC3.8□□□□□ -1.8
HOXA2O43364 SNORD36C-201ENST00000516733 66 ntBASIC3.8□□□□□ -1.8
HOXA2O43364 SNORA18.7-201ENST00000516910 131 ntBASIC3.8□□□□□ -1.8
HOXA2O43364 AC024995.1-201ENST00000523014 93 ntBASIC3.8□□□□□ -1.8
HOXA2O43364 DLEU2_5.2-201ENST00000610606 84 ntBASIC3.8□□□□□ -1.8
HOXA2O43364 AL162726.3-218ENST00000636401 95 ntBASIC3.8□□□□□ -1.8
HOXA2O43364 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
HOXA2O43364 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.8□□□□□ -1.8
HOXA2O43364 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
HOXA2O43364 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HOXA2O43364 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.8□□□□□ -1.8
HOXA2O43364 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.8□□□□□ -1.8
HOXA2O43364 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HOXA2O43364 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HOXA2O43364 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
HOXA2O43364 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.79□□□□□ -1.8
HOXA2O43364 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.79□□□□□ -1.8
HOXA2O43364 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HOXA2O43364 SNORD74.4-201ENST00000364129 80 ntBASIC3.79□□□□□ -1.8
HOXA2O43364 RNU6-268P-201ENST00000364174 107 ntBASIC3.79□□□□□ -1.8
HOXA2O43364 SNORA68.1-201ENST00000364537 132 ntBASIC3.79□□□□□ -1.8
HOXA2O43364 Y_RNA.440-201ENST00000384120 114 ntBASIC3.79□□□□□ -1.8
HOXA2O43364 Y_RNA.454-201ENST00000384224 113 ntBASIC3.79□□□□□ -1.8
HOXA2O43364 RNU6-820P-201ENST00000384273 107 ntBASIC3.79□□□□□ -1.8
HOXA2O43364 MIR450A2-201ENST00000385022 100 ntBASIC3.79□□□□□ -1.8
HOXA2O43364 NDUFB4P4-201ENST00000404822 243 ntBASIC3.79□□□□□ -1.8
HOXA2O43364 AC107083.1-201ENST00000439643 279 ntBASIC3.79□□□□□ -1.8
HOXA2O43364 ATP5J2P3-201ENST00000451550 258 ntBASIC3.79□□□□□ -1.8
HOXA2O43364 RN7SL636P-201ENST00000497504 294 ntBASIC3.79□□□□□ -1.8
HOXA2O43364 RNU6-667P-201ENST00000517186 102 ntBASIC3.79□□□□□ -1.8
HOXA2O43364 MIR4305-201ENST00000583252 102 ntBASIC3.79□□□□□ -1.8
HOXA2O43364 AC005000.2-201ENST00000605468 310 ntBASIC3.79□□□□□ -1.8
HOXA2O43364 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
HOXA2O43364 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
HOXA2O43364 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
HOXA2O43364 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
HOXA2O43364 MIR1912-201ENST00000410389 80 ntBASIC3.78□□□□□ -1.8
HOXA2O43364 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.78□□□□□ -1.8
HOXA2O43364 RN7SL594P-201ENST00000470590 287 ntBASIC3.78□□□□□ -1.8
HOXA2O43364 RNU6-638P-201ENST00000516582 104 ntBASIC3.78□□□□□ -1.8
HOXA2O43364 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.78□□□□□ -1.8
HOXA2O43364 AL355596.1-201ENST00000565399 3996 ntBASIC3.78□□□□□ -1.8
HOXA2O43364 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
HOXA2O43364 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
HOXA2O43364 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HOXA2O43364 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HOXA2O43364 CEP170P1-201ENST00000502249 4587 ntBASIC3.77□□□□□ -1.81
HOXA2O43364 SNORA33-201ENST00000363664 130 ntBASIC3.77□□□□□ -1.81
HOXA2O43364 RNU4-36P-201ENST00000364294 144 ntBASIC3.77□□□□□ -1.81
HOXA2O43364 Y_RNA.336-201ENST00000365307 109 ntBASIC3.77□□□□□ -1.81
HOXA2O43364 Y_RNA.351-201ENST00000365436 96 ntBASIC3.77□□□□□ -1.81
HOXA2O43364 MIR592-201ENST00000384959 97 ntBASIC3.77□□□□□ -1.81
HOXA2O43364 MIR93-201ENST00000385024 80 ntBASIC3.77□□□□□ -1.81
HOXA2O43364 RNU6-1275P-201ENST00000391087 107 ntBASIC3.77□□□□□ -1.81
HOXA2O43364 SRIP3-201ENST00000413200 219 ntBASIC3.77□□□□□ -1.81
HOXA2O43364 AC087499.4-201ENST00000448505 178 ntBASIC3.77□□□□□ -1.81
HOXA2O43364 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.77□□□□□ -1.81
HOXA2O43364 AC107297.1-201ENST00000459991 176 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms