Protein–RNA interactions for Protein: Q9NZU5

LMCD1, LIM and cysteine-rich domains protein 1, humanhuman

Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1Q9NZU5 RNU6-412P-201ENST00000516434 106 ntBASIC3.3□□□□□ -1.88
LMCD1Q9NZU5 snoMBII-202.2-201ENST00000517263 86 ntBASIC3.3□□□□□ -1.88
LMCD1Q9NZU5 AC027419.1-201ENST00000522976 328 ntBASIC3.3□□□□□ -1.88
LMCD1Q9NZU5 POLR3GP1-201ENST00000594073 261 ntBASIC3.3□□□□□ -1.88
LMCD1Q9NZU5 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
LMCD1Q9NZU5 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.29□□□□□ -1.88
LMCD1Q9NZU5 ZNF720P1-201ENST00000562403 1939 ntBASIC3.29□□□□□ -1.88
LMCD1Q9NZU5 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
LMCD1Q9NZU5 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
LMCD1Q9NZU5 MIR22-201ENST00000362190 85 ntBASIC3.29□□□□□ -1.88
LMCD1Q9NZU5 SNORA51.5-201ENST00000384126 131 ntBASIC3.29□□□□□ -1.88
LMCD1Q9NZU5 RNU6-820P-201ENST00000384273 107 ntBASIC3.29□□□□□ -1.88
LMCD1Q9NZU5 SNORD14D-201ENST00000384390 87 ntBASIC3.29□□□□□ -1.88
LMCD1Q9NZU5 MIR1185-2-201ENST00000408687 86 ntBASIC3.29□□□□□ -1.88
LMCD1Q9NZU5 AL109933.2-201ENST00000452651 260 ntBASIC3.29□□□□□ -1.88
LMCD1Q9NZU5 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.29□□□□□ -1.88
LMCD1Q9NZU5 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.29□□□□□ -1.88
LMCD1Q9NZU5 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.29□□□□□ -1.88
LMCD1Q9NZU5 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LMCD1Q9NZU5 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.29□□□□□ -1.88
LMCD1Q9NZU5 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.29□□□□□ -1.88
LMCD1Q9NZU5 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LMCD1Q9NZU5 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
LMCD1Q9NZU5 SNORA51.4-201ENST00000364993 124 ntBASIC3.28□□□□□ -1.88
LMCD1Q9NZU5 SNORA72-201ENST00000384339 132 ntBASIC3.28□□□□□ -1.88
LMCD1Q9NZU5 RNU1-57P-201ENST00000384491 166 ntBASIC3.28□□□□□ -1.88
LMCD1Q9NZU5 MIR450A2-201ENST00000385022 100 ntBASIC3.28□□□□□ -1.88
LMCD1Q9NZU5 RNA5SP508-201ENST00000411327 119 ntBASIC3.28□□□□□ -1.88
LMCD1Q9NZU5 RPS3AP1-201ENST00000413190 320 ntBASIC3.28□□□□□ -1.88
LMCD1Q9NZU5 UBL5P3-201ENST00000475112 231 ntBASIC3.28□□□□□ -1.88
LMCD1Q9NZU5 RPL23AP54-201ENST00000495129 419 ntBASIC3.28□□□□□ -1.88
LMCD1Q9NZU5 RN7SKP132-201ENST00000516001 208 ntBASIC3.28□□□□□ -1.88
LMCD1Q9NZU5 RNU6-1098P-201ENST00000516772 96 ntBASIC3.28□□□□□ -1.88
LMCD1Q9NZU5 MIR2276-201ENST00000516886 89 ntBASIC3.28□□□□□ -1.88
LMCD1Q9NZU5 IGKV1-22-201ENST00000524313 326 ntBASIC3.28□□□□□ -1.88
LMCD1Q9NZU5 AC091544.4-201ENST00000555268 342 ntBASIC3.28□□□□□ -1.88
LMCD1Q9NZU5 AP003357.1-201ENST00000604497 148 ntBASIC3.28□□□□□ -1.88
LMCD1Q9NZU5 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LMCD1Q9NZU5 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.28□□□□□ -1.88
LMCD1Q9NZU5 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LMCD1Q9NZU5 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
LMCD1Q9NZU5 AC010680.1-201ENST00000590024 3590 ntBASIC3.27□□□□□ -1.89
LMCD1Q9NZU5 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
LMCD1Q9NZU5 AL356292.1-201ENST00000283110 373 ntBASIC3.27□□□□□ -1.89
LMCD1Q9NZU5 RNU6-228P-201ENST00000362700 106 ntBASIC3.27□□□□□ -1.89
LMCD1Q9NZU5 RNU6-309P-201ENST00000364573 106 ntBASIC3.27□□□□□ -1.89
LMCD1Q9NZU5 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
LMCD1Q9NZU5 RNU6-1080P-201ENST00000383982 107 ntBASIC3.27□□□□□ -1.89
LMCD1Q9NZU5 MIR586-201ENST00000385035 97 ntBASIC3.27□□□□□ -1.89
LMCD1Q9NZU5 RNU6-440P-201ENST00000390882 105 ntBASIC3.27□□□□□ -1.89
LMCD1Q9NZU5 MIR873-201ENST00000401120 77 ntBASIC3.27□□□□□ -1.89
LMCD1Q9NZU5 RPL23AP7-203ENST00000449021 469 ntBASIC3.27□□□□□ -1.89
LMCD1Q9NZU5 AC108938.1-201ENST00000451204 136 ntBASIC3.27□□□□□ -1.89
LMCD1Q9NZU5 CENPBD1P1-201ENST00000464061 469 ntBASIC3.27□□□□□ -1.89
LMCD1Q9NZU5 RPL36AP48-201ENST00000485521 314 ntBASIC3.27□□□□□ -1.89
LMCD1Q9NZU5 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.27□□□□□ -1.89
LMCD1Q9NZU5 MIR449C-201ENST00000516047 92 ntBASIC3.27□□□□□ -1.89
LMCD1Q9NZU5 RNU5F-4P-201ENST00000516581 114 ntBASIC3.27□□□□□ -1.89
LMCD1Q9NZU5 Y_RNA.690-201ENST00000516603 95 ntBASIC3.27□□□□□ -1.89
LMCD1Q9NZU5 RNU6-521P-201ENST00000516663 105 ntBASIC3.27□□□□□ -1.89
LMCD1Q9NZU5 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.27□□□□□ -1.89
LMCD1Q9NZU5 AC107016.2-201ENST00000547968 190 ntBASIC3.27□□□□□ -1.89
LMCD1Q9NZU5 AC131055.1-201ENST00000584626 316 ntBASIC3.27□□□□□ -1.89
LMCD1Q9NZU5 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LMCD1Q9NZU5 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.27□□□□□ -1.89
LMCD1Q9NZU5 AC026241.1-201ENST00000517873 2142 ntBASIC3.26□□□□□ -1.89
LMCD1Q9NZU5 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
LMCD1Q9NZU5 AC096644.4-201ENST00000563417 2912 ntBASIC3.26□□□□□ -1.89
LMCD1Q9NZU5 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.26□□□□□ -1.89
LMCD1Q9NZU5 RNU4-41P-201ENST00000364426 143 ntBASIC3.26□□□□□ -1.89
LMCD1Q9NZU5 Y_RNA.549-201ENST00000384657 102 ntBASIC3.26□□□□□ -1.89
LMCD1Q9NZU5 RNU6-136P-201ENST00000384663 107 ntBASIC3.26□□□□□ -1.89
LMCD1Q9NZU5 SNORD12C-201ENST00000386307 89 ntBASIC3.26□□□□□ -1.89
LMCD1Q9NZU5 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.26□□□□□ -1.89
LMCD1Q9NZU5 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.26□□□□□ -1.89
LMCD1Q9NZU5 AL445687.1-201ENST00000439946 251 ntBASIC3.26□□□□□ -1.89
LMCD1Q9NZU5 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC3.26□□□□□ -1.89
LMCD1Q9NZU5 RN7SL75P-201ENST00000461926 281 ntBASIC3.26□□□□□ -1.89
LMCD1Q9NZU5 HMGN2P9-201ENST00000476875 229 ntBASIC3.26□□□□□ -1.89
LMCD1Q9NZU5 AC021205.2-201ENST00000480069 347 ntBASIC3.26□□□□□ -1.89
LMCD1Q9NZU5 ATP5EP1-201ENST00000510257 156 ntBASIC3.26□□□□□ -1.89
LMCD1Q9NZU5 RNU6-63P-201ENST00000516690 95 ntBASIC3.26□□□□□ -1.89
LMCD1Q9NZU5 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
LMCD1Q9NZU5 Y_RNA.221-201ENST00000364248 96 ntBASIC3.25□□□□□ -1.89
LMCD1Q9NZU5 RNU1-101P-201ENST00000391171 127 ntBASIC3.25□□□□□ -1.89
LMCD1Q9NZU5 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.25□□□□□ -1.89
LMCD1Q9NZU5 RNU6-437P-201ENST00000459408 95 ntBASIC3.25□□□□□ -1.89
LMCD1Q9NZU5 RNU7-57P-201ENST00000459540 60 ntBASIC3.25□□□□□ -1.89
LMCD1Q9NZU5 AC080013.2-201ENST00000460866 323 ntBASIC3.25□□□□□ -1.89
LMCD1Q9NZU5 TRBV12-1-201ENST00000479785 344 ntBASIC3.25□□□□□ -1.89
LMCD1Q9NZU5 AC015720.1-201ENST00000565251 277 ntBASIC3.25□□□□□ -1.89
LMCD1Q9NZU5 AL049861.1-201ENST00000603130 150 ntBASIC3.25□□□□□ -1.89
LMCD1Q9NZU5 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.25□□□□□ -1.89
LMCD1Q9NZU5 MIR6733-201ENST00000635723 61 ntBASIC3.25□□□□□ -1.89
LMCD1Q9NZU5 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
LMCD1Q9NZU5 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.24□□□□□ -1.89
LMCD1Q9NZU5 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.24□□□□□ -1.89
LMCD1Q9NZU5 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.24□□□□□ -1.89
LMCD1Q9NZU5 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.24□□□□□ -1.89
LMCD1Q9NZU5 MIR494-201ENST00000349529 81 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 143.4 ms