Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 RNU6-674P-201ENST00000363831 107 ntBASIC2.55□□□□□ -2
PARPBPQ9NWS1 RNU6-271P-201ENST00000363858 105 ntBASIC2.55□□□□□ -2
PARPBPQ9NWS1 RNU6-978P-201ENST00000364371 103 ntBASIC2.55□□□□□ -2
PARPBPQ9NWS1 SNORA44-201ENST00000384584 132 ntBASIC2.55□□□□□ -2
PARPBPQ9NWS1 MIR512-1-201ENST00000384913 84 ntBASIC2.55□□□□□ -2
PARPBPQ9NWS1 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.55□□□□□ -2
PARPBPQ9NWS1 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.55□□□□□ -2
PARPBPQ9NWS1 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.55□□□□□ -2
PARPBPQ9NWS1 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.55□□□□□ -2
PARPBPQ9NWS1 HMGN2P18-201ENST00000450680 270 ntBASIC2.55□□□□□ -2
PARPBPQ9NWS1 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.55□□□□□ -2
PARPBPQ9NWS1 AC016925.1-201ENST00000458303 298 ntBASIC2.55□□□□□ -2
PARPBPQ9NWS1 AP004217.1-201ENST00000480579 346 ntBASIC2.55□□□□□ -2
PARPBPQ9NWS1 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.55□□□□□ -2
PARPBPQ9NWS1 RNU6-586P-201ENST00000517265 104 ntBASIC2.55□□□□□ -2
PARPBPQ9NWS1 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.55□□□□□ -2
PARPBPQ9NWS1 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.55□□□□□ -2
PARPBPQ9NWS1 MIR6129-201ENST00000616087 109 ntBASIC2.55□□□□□ -2
PARPBPQ9NWS1 MAPK10-266ENST00000641066 6555 ntBASIC2.54□□□□□ -2
PARPBPQ9NWS1 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.54□□□□□ -2
PARPBPQ9NWS1 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
PARPBPQ9NWS1 U8.1-201ENST00000362843 134 ntBASIC2.54□□□□□ -2
PARPBPQ9NWS1 RNU6-486P-201ENST00000363116 107 ntBASIC2.54□□□□□ -2
PARPBPQ9NWS1 RNU6-597P-201ENST00000365620 102 ntBASIC2.54□□□□□ -2
PARPBPQ9NWS1 RNU6-1083P-201ENST00000384022 107 ntBASIC2.54□□□□□ -2
PARPBPQ9NWS1 Y_RNA.563-201ENST00000384707 108 ntBASIC2.54□□□□□ -2
PARPBPQ9NWS1 MIR181B1-201ENST00000385240 110 ntBASIC2.54□□□□□ -2
PARPBPQ9NWS1 Z92545.1-201ENST00000411782 234 ntBASIC2.54□□□□□ -2
PARPBPQ9NWS1 AL158823.1-201ENST00000418441 478 ntBASIC2.54□□□□□ -2
PARPBPQ9NWS1 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.54□□□□□ -2
PARPBPQ9NWS1 RPS27P22-201ENST00000478056 241 ntBASIC2.54□□□□□ -2
PARPBPQ9NWS1 RNU7-116P-201ENST00000516940 62 ntBASIC2.54□□□□□ -2
PARPBPQ9NWS1 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.54□□□□□ -2
PARPBPQ9NWS1 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
PARPBPQ9NWS1 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.53□□□□□ -2
PARPBPQ9NWS1 Y_RNA.91-201ENST00000363042 107 ntBASIC2.53□□□□□ -2
PARPBPQ9NWS1 RNU6-743P-201ENST00000364151 106 ntBASIC2.53□□□□□ -2
PARPBPQ9NWS1 Y_RNA.584-201ENST00000391090 114 ntBASIC2.53□□□□□ -2
PARPBPQ9NWS1 RNY4P18-201ENST00000391107 89 ntBASIC2.53□□□□□ -2
PARPBPQ9NWS1 RPS4XP11-201ENST00000446897 772 ntBASIC2.53□□□□□ -2
PARPBPQ9NWS1 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.53□□□□□ -2
PARPBPQ9NWS1 RNU6-948P-201ENST00000516374 107 ntBASIC2.53□□□□□ -2
PARPBPQ9NWS1 RNA5SP367-201ENST00000516557 118 ntBASIC2.53□□□□□ -2
PARPBPQ9NWS1 RNU6-197P-201ENST00000516680 100 ntBASIC2.53□□□□□ -2
PARPBPQ9NWS1 RPL12P50-201ENST00000603116 116 ntBASIC2.53□□□□□ -2
PARPBPQ9NWS1 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
PARPBPQ9NWS1 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
PARPBPQ9NWS1 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.52□□□□□ -2.01
PARPBPQ9NWS1 MIR26A1-201ENST00000362205 77 ntBASIC2.52□□□□□ -2.01
PARPBPQ9NWS1 RNU6-525P-201ENST00000363685 104 ntBASIC2.52□□□□□ -2.01
PARPBPQ9NWS1 RNU4-13P-201ENST00000364019 141 ntBASIC2.52□□□□□ -2.01
PARPBPQ9NWS1 SNORA25.7-201ENST00000364375 127 ntBASIC2.52□□□□□ -2.01
PARPBPQ9NWS1 RNU6-1056P-201ENST00000383996 107 ntBASIC2.52□□□□□ -2.01
PARPBPQ9NWS1 RNU6-1235P-201ENST00000384559 107 ntBASIC2.52□□□□□ -2.01
PARPBPQ9NWS1 RNA5SP496-201ENST00000391240 109 ntBASIC2.52□□□□□ -2.01
PARPBPQ9NWS1 Z82209.1-201ENST00000422141 2135 ntBASIC2.52□□□□□ -2.01
PARPBPQ9NWS1 COTL1P1-201ENST00000422309 375 ntBASIC2.52□□□□□ -2.01
PARPBPQ9NWS1 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.52□□□□□ -2.01
PARPBPQ9NWS1 AC010154.1-201ENST00000425857 269 ntBASIC2.52□□□□□ -2.01
PARPBPQ9NWS1 AC092427.1-202ENST00000430569 476 ntBASIC2.52□□□□□ -2.01
PARPBPQ9NWS1 AC245102.2-201ENST00000448956 180 ntBASIC2.52□□□□□ -2.01
PARPBPQ9NWS1 RNU6-498P-201ENST00000459468 107 ntBASIC2.52□□□□□ -2.01
PARPBPQ9NWS1 AC090142.3-201ENST00000519012 385 ntBASIC2.52□□□□□ -2.01
PARPBPQ9NWS1 RPL23AP91-201ENST00000569211 455 ntBASIC2.52□□□□□ -2.01
PARPBPQ9NWS1 ELOCP29-201ENST00000588193 334 ntBASIC2.52□□□□□ -2.01
PARPBPQ9NWS1 MIR7515-201ENST00000637837 67 ntBASIC2.52□□□□□ -2.01
PARPBPQ9NWS1 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.52□□□□□ -2.01
PARPBPQ9NWS1 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
PARPBPQ9NWS1 RNU1-22P-201ENST00000363334 158 ntBASIC2.51□□□□□ -2.01
PARPBPQ9NWS1 RNU1-23P-201ENST00000363361 144 ntBASIC2.51□□□□□ -2.01
PARPBPQ9NWS1 RNU6-1240P-201ENST00000365155 104 ntBASIC2.51□□□□□ -2.01
PARPBPQ9NWS1 RNU6-438P-201ENST00000365561 103 ntBASIC2.51□□□□□ -2.01
PARPBPQ9NWS1 Y_RNA.432-201ENST00000384087 111 ntBASIC2.51□□□□□ -2.01
PARPBPQ9NWS1 SNORA40.5-201ENST00000391061 128 ntBASIC2.51□□□□□ -2.01
PARPBPQ9NWS1 RNU6-1064P-201ENST00000410626 104 ntBASIC2.51□□□□□ -2.01
PARPBPQ9NWS1 Y_RNA.630-201ENST00000411370 108 ntBASIC2.51□□□□□ -2.01
PARPBPQ9NWS1 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.51□□□□□ -2.01
PARPBPQ9NWS1 SUMO1P4-201ENST00000429430 302 ntBASIC2.51□□□□□ -2.01
PARPBPQ9NWS1 AL139132.1-201ENST00000431587 344 ntBASIC2.51□□□□□ -2.01
PARPBPQ9NWS1 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.51□□□□□ -2.01
PARPBPQ9NWS1 AC025750.2-201ENST00000442609 450 ntBASIC2.51□□□□□ -2.01
PARPBPQ9NWS1 RNU2-60P-201ENST00000517290 128 ntBASIC2.51□□□□□ -2.01
PARPBPQ9NWS1 AC018630.3-201ENST00000542637 96 ntBASIC2.51□□□□□ -2.01
PARPBPQ9NWS1 AC004486.1-201ENST00000546846 233 ntBASIC2.51□□□□□ -2.01
PARPBPQ9NWS1 MIR3199-1-201ENST00000582434 88 ntBASIC2.51□□□□□ -2.01
PARPBPQ9NWS1 AL137790.1-201ENST00000634283 177 ntBASIC2.51□□□□□ -2.01
PARPBPQ9NWS1 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
PARPBPQ9NWS1 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
PARPBPQ9NWS1 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.51□□□□□ -2.01
PARPBPQ9NWS1 Z82195.2-201ENST00000612348 18351 ntBASIC2.5□□□□□ -2.01
PARPBPQ9NWS1 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
PARPBPQ9NWS1 Y_RNA.203-201ENST00000364106 102 ntBASIC2.5□□□□□ -2.01
PARPBPQ9NWS1 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
PARPBPQ9NWS1 SNORA72-201ENST00000384339 132 ntBASIC2.5□□□□□ -2.01
PARPBPQ9NWS1 AL590004.2-201ENST00000404787 371 ntBASIC2.5□□□□□ -2.01
PARPBPQ9NWS1 SNORA79-201ENST00000408376 140 ntBASIC2.5□□□□□ -2.01
PARPBPQ9NWS1 MLLT10P1-201ENST00000418346 262 ntBASIC2.5□□□□□ -2.01
PARPBPQ9NWS1 AC087499.2-201ENST00000432861 149 ntBASIC2.5□□□□□ -2.01
PARPBPQ9NWS1 MTCO1P44-201ENST00000441935 243 ntBASIC2.5□□□□□ -2.01
PARPBPQ9NWS1 PDCD5P2-201ENST00000507570 312 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 383.3 ms