Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 RNU6-659P-201ENST00000516454 104 ntBASIC2.95□□□□□ -1.94
RNF38Q9H0F5 MIR4319-201ENST00000577285 85 ntBASIC2.95□□□□□ -1.94
RNF38Q9H0F5 AC120024.3-201ENST00000603167 156 ntBASIC2.95□□□□□ -1.94
RNF38Q9H0F5 AC005972.2-201ENST00000604690 348 ntBASIC2.95□□□□□ -1.94
RNF38Q9H0F5 U7.2-201ENST00000607576 63 ntBASIC2.95□□□□□ -1.94
RNF38Q9H0F5 MIR6733-201ENST00000635723 61 ntBASIC2.95□□□□□ -1.94
RNF38Q9H0F5 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
RNF38Q9H0F5 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
RNF38Q9H0F5 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
RNF38Q9H0F5 RNU6-271P-201ENST00000363858 105 ntBASIC2.94□□□□□ -1.94
RNF38Q9H0F5 RNU6-234P-201ENST00000365229 104 ntBASIC2.94□□□□□ -1.94
RNF38Q9H0F5 RNU6-136P-201ENST00000384663 107 ntBASIC2.94□□□□□ -1.94
RNF38Q9H0F5 SNORA79-201ENST00000408376 140 ntBASIC2.94□□□□□ -1.94
RNF38Q9H0F5 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.94□□□□□ -1.94
RNF38Q9H0F5 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.94□□□□□ -1.94
RNF38Q9H0F5 RPL39P40-201ENST00000445481 146 ntBASIC2.94□□□□□ -1.94
RNF38Q9H0F5 UQCRHP3-201ENST00000451503 251 ntBASIC2.94□□□□□ -1.94
RNF38Q9H0F5 SNRPGP8-201ENST00000454064 226 ntBASIC2.94□□□□□ -1.94
RNF38Q9H0F5 AC010598.1-201ENST00000510378 103 ntBASIC2.94□□□□□ -1.94
RNF38Q9H0F5 AC090142.3-201ENST00000519012 385 ntBASIC2.94□□□□□ -1.94
RNF38Q9H0F5 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.94□□□□□ -1.94
RNF38Q9H0F5 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.94□□□□□ -1.94
RNF38Q9H0F5 AL049861.1-201ENST00000603130 150 ntBASIC2.94□□□□□ -1.94
RNF38Q9H0F5 AC013412.1-201ENST00000610687 192 ntBASIC2.94□□□□□ -1.94
RNF38Q9H0F5 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
RNF38Q9H0F5 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
RNF38Q9H0F5 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.93□□□□□ -1.94
RNF38Q9H0F5 AC062016.1-201ENST00000355719 319 ntBASIC2.93□□□□□ -1.94
RNF38Q9H0F5 SNORD114-7-201ENST00000362520 77 ntBASIC2.93□□□□□ -1.94
RNF38Q9H0F5 RNU6-235P-201ENST00000362644 107 ntBASIC2.93□□□□□ -1.94
RNF38Q9H0F5 SNORA63.4-201ENST00000362763 126 ntBASIC2.93□□□□□ -1.94
RNF38Q9H0F5 Y_RNA.251-201ENST00000364551 99 ntBASIC2.93□□□□□ -1.94
RNF38Q9H0F5 RNU6-1056P-201ENST00000383996 107 ntBASIC2.93□□□□□ -1.94
RNF38Q9H0F5 RNU6-1323P-201ENST00000384025 107 ntBASIC2.93□□□□□ -1.94
RNF38Q9H0F5 RNU6-418P-201ENST00000384035 107 ntBASIC2.93□□□□□ -1.94
RNF38Q9H0F5 RNY3P5-201ENST00000384127 102 ntBASIC2.93□□□□□ -1.94
RNF38Q9H0F5 RNU6-975P-201ENST00000384296 105 ntBASIC2.93□□□□□ -1.94
RNF38Q9H0F5 RNU4-43P-201ENST00000410628 137 ntBASIC2.93□□□□□ -1.94
RNF38Q9H0F5 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.93□□□□□ -1.94
RNF38Q9H0F5 RNU6-221P-201ENST00000459541 99 ntBASIC2.93□□□□□ -1.94
RNF38Q9H0F5 RNU6-965P-201ENST00000516721 96 ntBASIC2.93□□□□□ -1.94
RNF38Q9H0F5 SNORA48.11-201ENST00000517015 89 ntBASIC2.93□□□□□ -1.94
RNF38Q9H0F5 AC109329.2-201ENST00000519658 482 ntBASIC2.93□□□□□ -1.94
RNF38Q9H0F5 AP001340.1-201ENST00000624405 217 ntBASIC2.93□□□□□ -1.94
RNF38Q9H0F5 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.93□□□□□ -1.94
RNF38Q9H0F5 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.93□□□□□ -1.94
RNF38Q9H0F5 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
RNF38Q9H0F5 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
RNF38Q9H0F5 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
RNF38Q9H0F5 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
RNF38Q9H0F5 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.92□□□□□ -1.94
RNF38Q9H0F5 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.92□□□□□ -1.94
RNF38Q9H0F5 RNU4-13P-201ENST00000364019 141 ntBASIC2.92□□□□□ -1.94
RNF38Q9H0F5 RNA5SP511-201ENST00000410487 115 ntBASIC2.92□□□□□ -1.94
RNF38Q9H0F5 RNA5SP184-201ENST00000411071 108 ntBASIC2.92□□□□□ -1.94
RNF38Q9H0F5 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.92□□□□□ -1.94
RNF38Q9H0F5 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.92□□□□□ -1.94
RNF38Q9H0F5 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.92□□□□□ -1.94
RNF38Q9H0F5 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.92□□□□□ -1.94
RNF38Q9H0F5 RNU7-116P-201ENST00000516940 62 ntBASIC2.92□□□□□ -1.94
RNF38Q9H0F5 MIR378D2-201ENST00000580636 98 ntBASIC2.92□□□□□ -1.94
RNF38Q9H0F5 MIR3162-201ENST00000581818 82 ntBASIC2.92□□□□□ -1.94
RNF38Q9H0F5 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.92□□□□□ -1.94
RNF38Q9H0F5 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.92□□□□□ -1.94
RNF38Q9H0F5 CENPCP1-201ENST00000533085 2578 ntBASIC2.92□□□□□ -1.94
RNF38Q9H0F5 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.92□□□□□ -1.94
RNF38Q9H0F5 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
RNF38Q9H0F5 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.91□□□□□ -1.94
RNF38Q9H0F5 AL159152.1-201ENST00000635019 2587 ntBASIC2.91□□□□□ -1.94
RNF38Q9H0F5 RNU6-1080P-201ENST00000383982 107 ntBASIC2.91□□□□□ -1.94
RNF38Q9H0F5 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
RNF38Q9H0F5 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.91□□□□□ -1.94
RNF38Q9H0F5 AL109933.2-201ENST00000452651 260 ntBASIC2.91□□□□□ -1.94
RNF38Q9H0F5 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.91□□□□□ -1.94
RNF38Q9H0F5 AC018630.3-201ENST00000542637 96 ntBASIC2.91□□□□□ -1.94
RNF38Q9H0F5 MIR6129-201ENST00000616087 109 ntBASIC2.91□□□□□ -1.94
RNF38Q9H0F5 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
RNF38Q9H0F5 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
RNF38Q9H0F5 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.9□□□□□ -1.94
RNF38Q9H0F5 RNU1-23P-201ENST00000363361 144 ntBASIC2.9□□□□□ -1.95
RNF38Q9H0F5 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.9□□□□□ -1.95
RNF38Q9H0F5 RNU6-546P-201ENST00000383991 107 ntBASIC2.9□□□□□ -1.95
RNF38Q9H0F5 RNU6-429P-201ENST00000384582 108 ntBASIC2.9□□□□□ -1.95
RNF38Q9H0F5 MIR512-1-201ENST00000384913 84 ntBASIC2.9□□□□□ -1.95
RNF38Q9H0F5 MIR561-201ENST00000385216 97 ntBASIC2.9□□□□□ -1.95
RNF38Q9H0F5 Y_RNA.584-201ENST00000391090 114 ntBASIC2.9□□□□□ -1.95
RNF38Q9H0F5 AL138827.1-201ENST00000402666 306 ntBASIC2.9□□□□□ -1.95
RNF38Q9H0F5 RNU2-32P-201ENST00000411193 191 ntBASIC2.9□□□□□ -1.95
RNF38Q9H0F5 RN7SKP101-201ENST00000411376 320 ntBASIC2.9□□□□□ -1.95
RNF38Q9H0F5 SNORD109B-201ENST00000458961 67 ntBASIC2.9□□□□□ -1.95
RNF38Q9H0F5 SNORD109A-201ENST00000459128 67 ntBASIC2.9□□□□□ -1.95
RNF38Q9H0F5 RPS27P22-201ENST00000478056 241 ntBASIC2.9□□□□□ -1.95
RNF38Q9H0F5 RPPH1-2P-201ENST00000516688 293 ntBASIC2.9□□□□□ -1.95
RNF38Q9H0F5 MIR4513-201ENST00000581077 86 ntBASIC2.9□□□□□ -1.95
RNF38Q9H0F5 AL929325.1-201ENST00000603096 117 ntBASIC2.9□□□□□ -1.95
RNF38Q9H0F5 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
RNF38Q9H0F5 MAPK10-266ENST00000641066 6555 ntBASIC2.9□□□□□ -1.95
RNF38Q9H0F5 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.9□□□□□ -1.95
RNF38Q9H0F5 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.9□□□□□ -1.95
RNF38Q9H0F5 AC009487.2-201ENST00000420969 6821 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 7.7 ms