Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
FOXP3Q9BZS1 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.02□□□□□ -1.93
FOXP3Q9BZS1 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.02□□□□□ -1.93
FOXP3Q9BZS1 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.02□□□□□ -1.93
FOXP3Q9BZS1 MIR22-201ENST00000362190 85 ntBASIC3.02□□□□□ -1.93
FOXP3Q9BZS1 RNU4-13P-201ENST00000364019 141 ntBASIC3.02□□□□□ -1.93
FOXP3Q9BZS1 RNU6-1082P-201ENST00000364574 107 ntBASIC3.02□□□□□ -1.93
FOXP3Q9BZS1 RNU6-484P-201ENST00000384016 107 ntBASIC3.02□□□□□ -1.93
FOXP3Q9BZS1 MIR181A2-201ENST00000384863 110 ntBASIC3.02□□□□□ -1.93
FOXP3Q9BZS1 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.02□□□□□ -1.93
FOXP3Q9BZS1 RPS27P22-201ENST00000478056 241 ntBASIC3.02□□□□□ -1.93
FOXP3Q9BZS1 RNU6-659P-201ENST00000516454 104 ntBASIC3.02□□□□□ -1.93
FOXP3Q9BZS1 RNU6-965P-201ENST00000516721 96 ntBASIC3.02□□□□□ -1.93
FOXP3Q9BZS1 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
FOXP3Q9BZS1 MIR7515-201ENST00000637837 67 ntBASIC3.02□□□□□ -1.93
FOXP3Q9BZS1 AC009487.2-201ENST00000420969 6821 ntBASIC3.02□□□□□ -1.93
FOXP3Q9BZS1 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
FOXP3Q9BZS1 RNU6-834P-201ENST00000362367 110 ntBASIC3.01□□□□□ -1.93
FOXP3Q9BZS1 RNU1-22P-201ENST00000363334 158 ntBASIC3.01□□□□□ -1.93
FOXP3Q9BZS1 RNU6-546P-201ENST00000383991 107 ntBASIC3.01□□□□□ -1.93
FOXP3Q9BZS1 SNORA54-201ENST00000384281 123 ntBASIC3.01□□□□□ -1.93
FOXP3Q9BZS1 Y_RNA.563-201ENST00000384707 108 ntBASIC3.01□□□□□ -1.93
FOXP3Q9BZS1 AC245047.4-201ENST00000433189 144 ntBASIC3.01□□□□□ -1.93
FOXP3Q9BZS1 AC107083.1-201ENST00000439643 279 ntBASIC3.01□□□□□ -1.93
FOXP3Q9BZS1 UBBP3-201ENST00000445497 241 ntBASIC3.01□□□□□ -1.93
FOXP3Q9BZS1 AC090515.1-201ENST00000465295 476 ntBASIC3.01□□□□□ -1.93
FOXP3Q9BZS1 RNU6-919P-201ENST00000516731 104 ntBASIC3.01□□□□□ -1.93
FOXP3Q9BZS1 RNU2-56P-201ENST00000516826 190 ntBASIC3.01□□□□□ -1.93
FOXP3Q9BZS1 RNA5SP490-201ENST00000517141 136 ntBASIC3.01□□□□□ -1.93
FOXP3Q9BZS1 AC107016.2-201ENST00000547968 190 ntBASIC3.01□□□□□ -1.93
FOXP3Q9BZS1 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.01□□□□□ -1.93
FOXP3Q9BZS1 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.01□□□□□ -1.93
FOXP3Q9BZS1 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.01□□□□□ -1.93
FOXP3Q9BZS1 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
FOXP3Q9BZS1 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
FOXP3Q9BZS1 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3□□□□□ -1.93
FOXP3Q9BZS1 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3□□□□□ -1.93
FOXP3Q9BZS1 RNU6-978P-201ENST00000364371 103 ntBASIC3□□□□□ -1.93
FOXP3Q9BZS1 SNORA71.1-201ENST00000364523 117 ntBASIC3□□□□□ -1.93
FOXP3Q9BZS1 RNU6-915P-201ENST00000364943 103 ntBASIC3□□□□□ -1.93
FOXP3Q9BZS1 RNU1-109P-201ENST00000383960 147 ntBASIC3□□□□□ -1.93
FOXP3Q9BZS1 Y_RNA.432-201ENST00000384087 111 ntBASIC3□□□□□ -1.93
FOXP3Q9BZS1 MIR218-1-201ENST00000384999 110 ntBASIC3□□□□□ -1.93
FOXP3Q9BZS1 MIR95-201ENST00000385072 81 ntBASIC3□□□□□ -1.93
FOXP3Q9BZS1 RNU2-32P-201ENST00000411193 191 ntBASIC3□□□□□ -1.93
FOXP3Q9BZS1 MTCO1P44-201ENST00000441935 243 ntBASIC3□□□□□ -1.93
FOXP3Q9BZS1 AL357134.1-201ENST00000445848 426 ntBASIC3□□□□□ -1.93
FOXP3Q9BZS1 RN7SL499P-201ENST00000481141 276 ntBASIC3□□□□□ -1.93
FOXP3Q9BZS1 AC097462.1-201ENST00000514125 324 ntBASIC3□□□□□ -1.93
FOXP3Q9BZS1 MIR3199-1-201ENST00000582434 88 ntBASIC3□□□□□ -1.93
FOXP3Q9BZS1 AL929325.1-201ENST00000603096 117 ntBASIC3□□□□□ -1.93
FOXP3Q9BZS1 AL049861.1-201ENST00000603130 150 ntBASIC3□□□□□ -1.93
FOXP3Q9BZS1 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3□□□□□ -1.93
FOXP3Q9BZS1 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3□□□□□ -1.93
FOXP3Q9BZS1 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3□□□□□ -1.93
FOXP3Q9BZS1 AC080128.1-201ENST00000474389 1917 ntBASIC2.99□□□□□ -1.93
FOXP3Q9BZS1 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
FOXP3Q9BZS1 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.99□□□□□ -1.93
FOXP3Q9BZS1 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
FOXP3Q9BZS1 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
FOXP3Q9BZS1 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.99□□□□□ -1.93
FOXP3Q9BZS1 MIR512-1-201ENST00000384913 84 ntBASIC2.99□□□□□ -1.93
FOXP3Q9BZS1 FO393413.1-201ENST00000402892 195 ntBASIC2.99□□□□□ -1.93
FOXP3Q9BZS1 AL035461.1-201ENST00000421490 332 ntBASIC2.99□□□□□ -1.93
FOXP3Q9BZS1 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.99□□□□□ -1.93
FOXP3Q9BZS1 AC245102.2-201ENST00000448956 180 ntBASIC2.99□□□□□ -1.93
FOXP3Q9BZS1 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.99□□□□□ -1.93
FOXP3Q9BZS1 AC080013.2-201ENST00000460866 323 ntBASIC2.99□□□□□ -1.93
FOXP3Q9BZS1 SEM1P1-201ENST00000506694 209 ntBASIC2.99□□□□□ -1.93
FOXP3Q9BZS1 SNORA9.3-201ENST00000516383 129 ntBASIC2.99□□□□□ -1.93
FOXP3Q9BZS1 PRELID2P1-201ENST00000552837 301 ntBASIC2.99□□□□□ -1.93
FOXP3Q9BZS1 MIR5739-201ENST00000619803 80 ntBASIC2.99□□□□□ -1.93
FOXP3Q9BZS1 AL161431.1-201ENST00000618966 4205 ntBASIC2.99□□□□□ -1.93
FOXP3Q9BZS1 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
FOXP3Q9BZS1 SNORA68.1-201ENST00000364537 132 ntBASIC2.98□□□□□ -1.93
FOXP3Q9BZS1 RNU6-1325P-201ENST00000364905 105 ntBASIC2.98□□□□□ -1.93
FOXP3Q9BZS1 SNORA9.2-201ENST00000365361 133 ntBASIC2.98□□□□□ -1.93
FOXP3Q9BZS1 EEF1A1P41-201ENST00000414667 207 ntBASIC2.98□□□□□ -1.93
FOXP3Q9BZS1 RPS4XP11-201ENST00000446897 772 ntBASIC2.98□□□□□ -1.93
FOXP3Q9BZS1 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.98□□□□□ -1.93
FOXP3Q9BZS1 RN7SKP179-201ENST00000516126 217 ntBASIC2.98□□□□□ -1.93
FOXP3Q9BZS1 RNU6-1299P-201ENST00000516316 100 ntBASIC2.98□□□□□ -1.93
FOXP3Q9BZS1 AC090142.3-201ENST00000519012 385 ntBASIC2.98□□□□□ -1.93
FOXP3Q9BZS1 MIR2681-201ENST00000581814 105 ntBASIC2.98□□□□□ -1.93
FOXP3Q9BZS1 MIR4438-201ENST00000585271 93 ntBASIC2.98□□□□□ -1.93
FOXP3Q9BZS1 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
FOXP3Q9BZS1 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
FOXP3Q9BZS1 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
FOXP3Q9BZS1 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
FOXP3Q9BZS1 Y_RNA.203-201ENST00000364106 102 ntBASIC2.97□□□□□ -1.93
FOXP3Q9BZS1 Y_RNA.332-201ENST00000365271 113 ntBASIC2.97□□□□□ -1.93
FOXP3Q9BZS1 RNU6-44P-201ENST00000384045 107 ntBASIC2.97□□□□□ -1.93
FOXP3Q9BZS1 RNU6-136P-201ENST00000384663 107 ntBASIC2.97□□□□□ -1.93
FOXP3Q9BZS1 Y_RNA.584-201ENST00000391090 114 ntBASIC2.97□□□□□ -1.93
FOXP3Q9BZS1 CYCSP49-201ENST00000420810 319 ntBASIC2.97□□□□□ -1.93
FOXP3Q9BZS1 AC063976.3-201ENST00000426849 329 ntBASIC2.97□□□□□ -1.93
FOXP3Q9BZS1 AL161788.1-201ENST00000441805 169 ntBASIC2.97□□□□□ -1.93
FOXP3Q9BZS1 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.97□□□□□ -1.93
FOXP3Q9BZS1 AC093259.1-201ENST00000509755 300 ntBASIC2.97□□□□□ -1.93
FOXP3Q9BZS1 SNORD77.4-201ENST00000516158 81 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 132.6 ms