Protein–RNA interactions for Protein: Q9BYQ6

KRTAP4-11, Keratin-associated protein 4-11, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-11Q9BYQ6 RNU1-141P-201ENST00000364623 158 ntBASIC1.53□□□□□ -2.16
KRTAP4-11Q9BYQ6 Y_RNA.260-201ENST00000364628 101 ntBASIC1.53□□□□□ -2.16
KRTAP4-11Q9BYQ6 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC1.53□□□□□ -2.16
KRTAP4-11Q9BYQ6 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC1.53□□□□□ -2.16
KRTAP4-11Q9BYQ6 RNU6-258P-201ENST00000390884 101 ntBASIC1.53□□□□□ -2.16
KRTAP4-11Q9BYQ6 SNORA17.4-201ENST00000391287 132 ntBASIC1.53□□□□□ -2.16
KRTAP4-11Q9BYQ6 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC1.53□□□□□ -2.16
KRTAP4-11Q9BYQ6 RPS29P31-201ENST00000446147 164 ntBASIC1.53□□□□□ -2.16
KRTAP4-11Q9BYQ6 snoU13.20-201ENST00000459180 104 ntBASIC1.53□□□□□ -2.16
KRTAP4-11Q9BYQ6 S100A11P1-201ENST00000477525 312 ntBASIC1.53□□□□□ -2.16
KRTAP4-11Q9BYQ6 SNORD63.1-201ENST00000516178 80 ntBASIC1.53□□□□□ -2.16
KRTAP4-11Q9BYQ6 SCARNA16.5-201ENST00000517114 183 ntBASIC1.53□□□□□ -2.16
KRTAP4-11Q9BYQ6 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC1.53□□□□□ -2.16
KRTAP4-11Q9BYQ6 AC008033.2-201ENST00000542626 177 ntBASIC1.53□□□□□ -2.16
KRTAP4-11Q9BYQ6 SNORA70D-201ENST00000578836 135 ntBASIC1.53□□□□□ -2.16
KRTAP4-11Q9BYQ6 MIR3199-1-201ENST00000582434 88 ntBASIC1.53□□□□□ -2.16
KRTAP4-11Q9BYQ6 MIR3124-201ENST00000582636 67 ntBASIC1.53□□□□□ -2.16
KRTAP4-11Q9BYQ6 MIR4737-201ENST00000583979 81 ntBASIC1.53□□□□□ -2.16
KRTAP4-11Q9BYQ6 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC1.53□□□□□ -2.16
KRTAP4-11Q9BYQ6 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC1.53□□□□□ -2.16
KRTAP4-11Q9BYQ6 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC1.53□□□□□ -2.16
KRTAP4-11Q9BYQ6 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-11Q9BYQ6 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-11Q9BYQ6 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-11Q9BYQ6 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC1.53□□□□□ -2.16
KRTAP4-11Q9BYQ6 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.53□□□□□ -2.16
KRTAP4-11Q9BYQ6 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-11Q9BYQ6 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-11Q9BYQ6 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC1.53□□□□□ -2.17
KRTAP4-11Q9BYQ6 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.17
KRTAP4-11Q9BYQ6 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC1.53□□□□□ -2.17
KRTAP4-11Q9BYQ6 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.17
KRTAP4-11Q9BYQ6 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC1.53□□□□□ -2.17
KRTAP4-11Q9BYQ6 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC1.53□□□□□ -2.17
KRTAP4-11Q9BYQ6 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC1.52□□□□□ -2.17
KRTAP4-11Q9BYQ6 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
KRTAP4-11Q9BYQ6 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-11Q9BYQ6 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-11Q9BYQ6 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC1.52□□□□□ -2.17
KRTAP4-11Q9BYQ6 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC1.52□□□□□ -2.17
KRTAP4-11Q9BYQ6 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC1.52□□□□□ -2.17
KRTAP4-11Q9BYQ6 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-11Q9BYQ6 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC1.52□□□□□ -2.17
KRTAP4-11Q9BYQ6 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-11Q9BYQ6 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
KRTAP4-11Q9BYQ6 AL033543.1-201ENST00000623440 13454 ntBASIC1.52□□□□□ -2.17
KRTAP4-11Q9BYQ6 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-11Q9BYQ6 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC1.52□□□□□ -2.17
KRTAP4-11Q9BYQ6 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
KRTAP4-11Q9BYQ6 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
KRTAP4-11Q9BYQ6 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-11Q9BYQ6 RNU1-105P-201ENST00000363470 161 ntBASIC1.52□□□□□ -2.17
KRTAP4-11Q9BYQ6 RNU1-146P-201ENST00000364015 165 ntBASIC1.52□□□□□ -2.17
KRTAP4-11Q9BYQ6 RNA5SP224-201ENST00000365069 126 ntBASIC1.52□□□□□ -2.17
KRTAP4-11Q9BYQ6 SNORA25B-201ENST00000365507 128 ntBASIC1.52□□□□□ -2.17
KRTAP4-11Q9BYQ6 MIR653-201ENST00000385279 96 ntBASIC1.52□□□□□ -2.17
KRTAP4-11Q9BYQ6 RNU6-1111P-201ENST00000391118 107 ntBASIC1.52□□□□□ -2.17
KRTAP4-11Q9BYQ6 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.52□□□□□ -2.17
KRTAP4-11Q9BYQ6 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC1.52□□□□□ -2.17
KRTAP4-11Q9BYQ6 KRTAP3-4P-201ENST00000430780 280 ntBASIC1.52□□□□□ -2.17
KRTAP4-11Q9BYQ6 AC002429.1-201ENST00000437672 148 ntBASIC1.52□□□□□ -2.17
KRTAP4-11Q9BYQ6 AC069285.2-201ENST00000440210 275 ntBASIC1.52□□□□□ -2.17
KRTAP4-11Q9BYQ6 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC1.52□□□□□ -2.17
KRTAP4-11Q9BYQ6 IFNWP4-201ENST00000453148 294 ntBASIC1.52□□□□□ -2.17
KRTAP4-11Q9BYQ6 snoU13.27-201ENST00000459278 104 ntBASIC1.52□□□□□ -2.17
KRTAP4-11Q9BYQ6 snoU13.21-201ENST00000459368 105 ntBASIC1.52□□□□□ -2.17
KRTAP4-11Q9BYQ6 AC023424.1-201ENST00000496058 459 ntBASIC1.52□□□□□ -2.17
KRTAP4-11Q9BYQ6 KRTAP5-14P-201ENST00000502328 121 ntBASIC1.52□□□□□ -2.17
KRTAP4-11Q9BYQ6 SNORA31.15-201ENST00000516771 132 ntBASIC1.52□□□□□ -2.17
KRTAP4-11Q9BYQ6 SCARNA11.3-201ENST00000517276 130 ntBASIC1.52□□□□□ -2.17
KRTAP4-11Q9BYQ6 MIR5194-201ENST00000582634 120 ntBASIC1.52□□□□□ -2.17
KRTAP4-11Q9BYQ6 AC012616.1-201ENST00000600294 197 ntBASIC1.52□□□□□ -2.17
KRTAP4-11Q9BYQ6 AL391358.1-201ENST00000605342 190 ntBASIC1.52□□□□□ -2.17
KRTAP4-11Q9BYQ6 AC022202.1-201ENST00000613515 211 ntBASIC1.52□□□□□ -2.17
KRTAP4-11Q9BYQ6 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC1.52□□□□□ -2.17
KRTAP4-11Q9BYQ6 AC120057.5-201ENST00000623840 154 ntBASIC1.52□□□□□ -2.17
KRTAP4-11Q9BYQ6 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-11Q9BYQ6 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-11Q9BYQ6 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-11Q9BYQ6 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-11Q9BYQ6 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-11Q9BYQ6 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC1.52□□□□□ -2.17
KRTAP4-11Q9BYQ6 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
KRTAP4-11Q9BYQ6 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
KRTAP4-11Q9BYQ6 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC1.52□□□□□ -2.17
KRTAP4-11Q9BYQ6 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
KRTAP4-11Q9BYQ6 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-11Q9BYQ6 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-11Q9BYQ6 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-11Q9BYQ6 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC1.52□□□□□ -2.17
KRTAP4-11Q9BYQ6 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-11Q9BYQ6 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
KRTAP4-11Q9BYQ6 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-11Q9BYQ6 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
KRTAP4-11Q9BYQ6 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
KRTAP4-11Q9BYQ6 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
KRTAP4-11Q9BYQ6 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
KRTAP4-11Q9BYQ6 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC1.51□□□□□ -2.17
KRTAP4-11Q9BYQ6 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
KRTAP4-11Q9BYQ6 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 168.9 ms