Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CALR3Q96L12 RNU4-35P-201ENST00000362588 141 ntBASIC3.43□□□□□ -1.86
CALR3Q96L12 RNU1-70P-201ENST00000362618 164 ntBASIC3.43□□□□□ -1.86
CALR3Q96L12 FTH1P12-201ENST00000432137 551 ntBASIC3.43□□□□□ -1.86
CALR3Q96L12 RNU6-504P-201ENST00000516568 104 ntBASIC3.43□□□□□ -1.86
CALR3Q96L12 AC022217.4-201ENST00000604389 163 ntBASIC3.43□□□□□ -1.86
CALR3Q96L12 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.43□□□□□ -1.86
CALR3Q96L12 CTSLP2-204ENST00000629029 392 ntBASIC3.43□□□□□ -1.86
CALR3Q96L12 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
CALR3Q96L12 AP006437.1-201ENST00000641440 3685 ntBASIC3.43□□□□□ -1.86
CALR3Q96L12 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
CALR3Q96L12 SNORA46-201ENST00000384762 135 ntBASIC3.42□□□□□ -1.86
CALR3Q96L12 MIR522-201ENST00000385071 87 ntBASIC3.42□□□□□ -1.86
CALR3Q96L12 SNORD72-201ENST00000390994 80 ntBASIC3.42□□□□□ -1.86
CALR3Q96L12 RNU6ATAC-201ENST00000408749 126 ntBASIC3.42□□□□□ -1.86
CALR3Q96L12 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.42□□□□□ -1.86
CALR3Q96L12 AC245047.3-201ENST00000429428 127 ntBASIC3.42□□□□□ -1.86
CALR3Q96L12 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC3.42□□□□□ -1.86
CALR3Q96L12 SCGB1D5P-201ENST00000515134 247 ntBASIC3.42□□□□□ -1.86
CALR3Q96L12 U7.2-201ENST00000607576 63 ntBASIC3.42□□□□□ -1.86
CALR3Q96L12 5S_rRNA.11-201ENST00000618635 84 ntBASIC3.42□□□□□ -1.86
CALR3Q96L12 AC068724.3-201ENST00000625906 87 ntBASIC3.42□□□□□ -1.86
CALR3Q96L12 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CALR3Q96L12 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
CALR3Q96L12 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CALR3Q96L12 AC093831.2-201ENST00000624393 3427 ntBASIC3.41□□□□□ -1.86
CALR3Q96L12 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.41□□□□□ -1.86
CALR3Q96L12 Y_RNA.66-201ENST00000362862 102 ntBASIC3.41□□□□□ -1.86
CALR3Q96L12 Y_RNA.218-201ENST00000364218 104 ntBASIC3.41□□□□□ -1.86
CALR3Q96L12 RNU6-915P-201ENST00000364943 103 ntBASIC3.41□□□□□ -1.86
CALR3Q96L12 SNORA22C-201ENST00000384614 134 ntBASIC3.41□□□□□ -1.86
CALR3Q96L12 MIR218-2-201ENST00000385006 110 ntBASIC3.41□□□□□ -1.86
CALR3Q96L12 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.41□□□□□ -1.86
CALR3Q96L12 AC107083.1-201ENST00000439643 279 ntBASIC3.41□□□□□ -1.86
CALR3Q96L12 RPL39P40-201ENST00000445481 146 ntBASIC3.41□□□□□ -1.86
CALR3Q96L12 UQCRHP3-201ENST00000451503 251 ntBASIC3.41□□□□□ -1.86
CALR3Q96L12 RN7SL75P-201ENST00000461926 281 ntBASIC3.41□□□□□ -1.86
CALR3Q96L12 AC025518.1-201ENST00000479856 347 ntBASIC3.41□□□□□ -1.86
CALR3Q96L12 AC091544.4-201ENST00000555268 342 ntBASIC3.41□□□□□ -1.86
CALR3Q96L12 MIR4658-201ENST00000584344 65 ntBASIC3.41□□□□□ -1.86
CALR3Q96L12 AC069114.2-201ENST00000604699 304 ntBASIC3.41□□□□□ -1.86
CALR3Q96L12 U3.45-201ENST00000607547 219 ntBASIC3.41□□□□□ -1.86
CALR3Q96L12 MIR6748-201ENST00000610433 71 ntBASIC3.41□□□□□ -1.86
CALR3Q96L12 AL121772.2-201ENST00000614331 297 ntBASIC3.41□□□□□ -1.86
CALR3Q96L12 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.41□□□□□ -1.86
CALR3Q96L12 AC093908.1-201ENST00000623125 8092 ntBASIC3.4□□□□□ -1.86
CALR3Q96L12 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CALR3Q96L12 Y_RNA.71-201ENST00000362892 104 ntBASIC3.4□□□□□ -1.87
CALR3Q96L12 RNU6-1019P-201ENST00000364424 107 ntBASIC3.4□□□□□ -1.87
CALR3Q96L12 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.4□□□□□ -1.87
CALR3Q96L12 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.4□□□□□ -1.87
CALR3Q96L12 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.4□□□□□ -1.87
CALR3Q96L12 AC131055.1-201ENST00000584626 316 ntBASIC3.4□□□□□ -1.87
CALR3Q96L12 MIR4276-201ENST00000584832 70 ntBASIC3.4□□□□□ -1.87
CALR3Q96L12 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.4□□□□□ -1.87
CALR3Q96L12 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
CALR3Q96L12 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CALR3Q96L12 SNORD68-201ENST00000363214 84 ntBASIC3.39□□□□□ -1.87
CALR3Q96L12 RNU11-3P-201ENST00000391111 133 ntBASIC3.39□□□□□ -1.87
CALR3Q96L12 SNORA57.1-201ENST00000391227 145 ntBASIC3.39□□□□□ -1.87
CALR3Q96L12 AL606517.2-201ENST00000442855 241 ntBASIC3.39□□□□□ -1.87
CALR3Q96L12 RN7SKP43-201ENST00000516173 320 ntBASIC3.39□□□□□ -1.87
CALR3Q96L12 MIR4762-201ENST00000585261 75 ntBASIC3.39□□□□□ -1.87
CALR3Q96L12 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.38□□□□□ -1.87
CALR3Q96L12 Y_RNA.127-201ENST00000363386 109 ntBASIC3.38□□□□□ -1.87
CALR3Q96L12 SNORD116-14-201ENST00000383894 92 ntBASIC3.38□□□□□ -1.87
CALR3Q96L12 SNORD116-17-201ENST00000383929 92 ntBASIC3.38□□□□□ -1.87
CALR3Q96L12 RNU6-80P-201ENST00000384195 107 ntBASIC3.38□□□□□ -1.87
CALR3Q96L12 SNORD116-15-201ENST00000384445 92 ntBASIC3.38□□□□□ -1.87
CALR3Q96L12 SNORD116-19-201ENST00000384729 92 ntBASIC3.38□□□□□ -1.87
CALR3Q96L12 RNA5SP482-201ENST00000391269 118 ntBASIC3.38□□□□□ -1.87
CALR3Q96L12 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.38□□□□□ -1.87
CALR3Q96L12 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
CALR3Q96L12 SNORA18.4-201ENST00000516440 124 ntBASIC3.38□□□□□ -1.87
CALR3Q96L12 RNU7-28P-201ENST00000516759 62 ntBASIC3.38□□□□□ -1.87
CALR3Q96L12 AC007751.1-201ENST00000529260 376 ntBASIC3.38□□□□□ -1.87
CALR3Q96L12 AL365205.2-201ENST00000594586 68 ntBASIC3.38□□□□□ -1.87
CALR3Q96L12 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
CALR3Q96L12 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.38□□□□□ -1.87
CALR3Q96L12 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.38□□□□□ -1.87
CALR3Q96L12 AL035425.3-201ENST00000564206 4996 ntBASIC3.38□□□□□ -1.87
CALR3Q96L12 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CALR3Q96L12 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CALR3Q96L12 U8.5-201ENST00000364528 136 ntBASIC3.37□□□□□ -1.87
CALR3Q96L12 SNORD24-201ENST00000383884 75 ntBASIC3.37□□□□□ -1.87
CALR3Q96L12 MIR802-201ENST00000390235 94 ntBASIC3.37□□□□□ -1.87
CALR3Q96L12 RNA5SP109-201ENST00000391010 116 ntBASIC3.37□□□□□ -1.87
CALR3Q96L12 AC026403.1-201ENST00000518938 295 ntBASIC3.37□□□□□ -1.87
CALR3Q96L12 AC084364.2-201ENST00000546924 395 ntBASIC3.37□□□□□ -1.87
CALR3Q96L12 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.37□□□□□ -1.87
CALR3Q96L12 uc_338.25-201ENST00000613756 156 ntBASIC3.37□□□□□ -1.87
CALR3Q96L12 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.37□□□□□ -1.87
CALR3Q96L12 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.36□□□□□ -1.87
CALR3Q96L12 Y_RNA.120-201ENST00000363304 110 ntBASIC3.36□□□□□ -1.87
CALR3Q96L12 Y_RNA.265-201ENST00000364677 108 ntBASIC3.36□□□□□ -1.87
CALR3Q96L12 MIR597-201ENST00000384968 97 ntBASIC3.36□□□□□ -1.87
CALR3Q96L12 RNA5SP274-201ENST00000410484 108 ntBASIC3.36□□□□□ -1.87
CALR3Q96L12 RNA5SP127-201ENST00000411051 133 ntBASIC3.36□□□□□ -1.87
CALR3Q96L12 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.36□□□□□ -1.87
CALR3Q96L12 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms