Protein–RNA interactions for Protein: Q96EY7

PTCD3, Pentatricopeptide repeat domain-containing protein 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3Q96EY7 MIR4319-201ENST00000577285 85 ntBASIC2.44□□□□□ -2.02
PTCD3Q96EY7 MIR4513-201ENST00000581077 86 ntBASIC2.44□□□□□ -2.02
PTCD3Q96EY7 MIR4744-201ENST00000581563 82 ntBASIC2.44□□□□□ -2.02
PTCD3Q96EY7 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.44□□□□□ -2.02
PTCD3Q96EY7 AP003357.1-201ENST00000604497 148 ntBASIC2.44□□□□□ -2.02
PTCD3Q96EY7 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.44□□□□□ -2.02
PTCD3Q96EY7 AC005336.3-201ENST00000623833 2679 ntBASIC2.43□□□□□ -2.02
PTCD3Q96EY7 RNU6-271P-201ENST00000363858 105 ntBASIC2.43□□□□□ -2.02
PTCD3Q96EY7 RNU4-84P-201ENST00000364200 139 ntBASIC2.43□□□□□ -2.02
PTCD3Q96EY7 RNU6-275P-201ENST00000364910 107 ntBASIC2.43□□□□□ -2.02
PTCD3Q96EY7 RNU6-1240P-201ENST00000365155 104 ntBASIC2.43□□□□□ -2.02
PTCD3Q96EY7 RNU6-117P-201ENST00000365415 107 ntBASIC2.43□□□□□ -2.02
PTCD3Q96EY7 RNU6-144P-201ENST00000383951 107 ntBASIC2.43□□□□□ -2.02
PTCD3Q96EY7 RNU6-1323P-201ENST00000384025 107 ntBASIC2.43□□□□□ -2.02
PTCD3Q96EY7 Y_RNA.500-201ENST00000384466 111 ntBASIC2.43□□□□□ -2.02
PTCD3Q96EY7 Y_RNA.510-201ENST00000384511 114 ntBASIC2.43□□□□□ -2.02
PTCD3Q96EY7 MIR27B-201ENST00000385129 97 ntBASIC2.43□□□□□ -2.02
PTCD3Q96EY7 RNU6-383P-201ENST00000410864 94 ntBASIC2.43□□□□□ -2.02
PTCD3Q96EY7 RNA5SP184-201ENST00000411071 108 ntBASIC2.43□□□□□ -2.02
PTCD3Q96EY7 AC123900.1-201ENST00000420390 96 ntBASIC2.43□□□□□ -2.02
PTCD3Q96EY7 AC003685.2-201ENST00000422795 395 ntBASIC2.43□□□□□ -2.02
PTCD3Q96EY7 AL137159.1-201ENST00000452808 512 ntBASIC2.43□□□□□ -2.02
PTCD3Q96EY7 RPL36AP21-201ENST00000490372 323 ntBASIC2.43□□□□□ -2.02
PTCD3Q96EY7 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.43□□□□□ -2.02
PTCD3Q96EY7 Y_RNA.797-201ENST00000515977 94 ntBASIC2.43□□□□□ -2.02
PTCD3Q96EY7 RNU6-991P-201ENST00000516168 107 ntBASIC2.43□□□□□ -2.02
PTCD3Q96EY7 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.43□□□□□ -2.02
PTCD3Q96EY7 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.43□□□□□ -2.02
PTCD3Q96EY7 MIR548AY-201ENST00000617669 107 ntBASIC2.43□□□□□ -2.02
PTCD3Q96EY7 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.43□□□□□ -2.02
PTCD3Q96EY7 ZNF720P1-201ENST00000562403 1939 ntBASIC2.42□□□□□ -2.02
PTCD3Q96EY7 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
PTCD3Q96EY7 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
PTCD3Q96EY7 RNU6-103P-201ENST00000363686 107 ntBASIC2.42□□□□□ -2.02
PTCD3Q96EY7 RNA5SP456-201ENST00000364002 114 ntBASIC2.42□□□□□ -2.02
PTCD3Q96EY7 RNU6-818P-201ENST00000364837 108 ntBASIC2.42□□□□□ -2.02
PTCD3Q96EY7 RNU1-51P-201ENST00000365345 176 ntBASIC2.42□□□□□ -2.02
PTCD3Q96EY7 MIR616-201ENST00000385293 97 ntBASIC2.42□□□□□ -2.02
PTCD3Q96EY7 MT-TT-201ENST00000387460 66 ntBASIC2.42□□□□□ -2.02
PTCD3Q96EY7 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
PTCD3Q96EY7 SNORA36B-201ENST00000410438 131 ntBASIC2.42□□□□□ -2.02
PTCD3Q96EY7 RNA5SP511-201ENST00000410487 115 ntBASIC2.42□□□□□ -2.02
PTCD3Q96EY7 AL357134.1-201ENST00000445848 426 ntBASIC2.42□□□□□ -2.02
PTCD3Q96EY7 AC245047.8-201ENST00000456455 284 ntBASIC2.42□□□□□ -2.02
PTCD3Q96EY7 CKS1BP2-201ENST00000497342 240 ntBASIC2.42□□□□□ -2.02
PTCD3Q96EY7 AC005840.1-201ENST00000498412 377 ntBASIC2.42□□□□□ -2.02
PTCD3Q96EY7 RNU2-34P-201ENST00000516534 121 ntBASIC2.42□□□□□ -2.02
PTCD3Q96EY7 RNU1-104P-201ENST00000517280 175 ntBASIC2.42□□□□□ -2.02
PTCD3Q96EY7 MIR5688-201ENST00000580619 83 ntBASIC2.42□□□□□ -2.02
PTCD3Q96EY7 MIR5194-201ENST00000582634 120 ntBASIC2.42□□□□□ -2.02
PTCD3Q96EY7 AL355297.2-201ENST00000604792 129 ntBASIC2.42□□□□□ -2.02
PTCD3Q96EY7 AC012640.5-201ENST00000623897 319 ntBASIC2.42□□□□□ -2.02
PTCD3Q96EY7 AC006435.5-201ENST00000624486 112 ntBASIC2.42□□□□□ -2.02
PTCD3Q96EY7 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
PTCD3Q96EY7 RNU6-704P-201ENST00000364162 103 ntBASIC2.41□□□□□ -2.02
PTCD3Q96EY7 Y_RNA.229-201ENST00000364347 113 ntBASIC2.41□□□□□ -2.02
PTCD3Q96EY7 RNA5SP240-201ENST00000365355 128 ntBASIC2.41□□□□□ -2.02
PTCD3Q96EY7 SNORD116-18-201ENST00000383961 92 ntBASIC2.41□□□□□ -2.02
PTCD3Q96EY7 MIR518C-201ENST00000384822 101 ntBASIC2.41□□□□□ -2.02
PTCD3Q96EY7 MIR196B-201ENST00000384852 84 ntBASIC2.41□□□□□ -2.02
PTCD3Q96EY7 MIR613-201ENST00000385248 95 ntBASIC2.41□□□□□ -2.02
PTCD3Q96EY7 MIR1278-201ENST00000408753 81 ntBASIC2.41□□□□□ -2.02
PTCD3Q96EY7 AL135786.1-201ENST00000415892 214 ntBASIC2.41□□□□□ -2.02
PTCD3Q96EY7 AC008134.1-201ENST00000420943 193 ntBASIC2.41□□□□□ -2.02
PTCD3Q96EY7 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.41□□□□□ -2.02
PTCD3Q96EY7 AC127455.1-201ENST00000565496 145 ntBASIC2.41□□□□□ -2.02
PTCD3Q96EY7 MIR4724-201ENST00000579485 89 ntBASIC2.41□□□□□ -2.02
PTCD3Q96EY7 POLR3GP1-201ENST00000594073 261 ntBASIC2.41□□□□□ -2.02
PTCD3Q96EY7 AC005972.2-201ENST00000604690 348 ntBASIC2.41□□□□□ -2.02
PTCD3Q96EY7 U2.20-201ENST00000613956 192 ntBASIC2.41□□□□□ -2.02
PTCD3Q96EY7 MIR6852-201ENST00000621699 66 ntBASIC2.41□□□□□ -2.02
PTCD3Q96EY7 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.41□□□□□ -2.02
PTCD3Q96EY7 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.41□□□□□ -2.02
PTCD3Q96EY7 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
PTCD3Q96EY7 RNA5SP125-201ENST00000364843 120 ntBASIC2.4□□□□□ -2.03
PTCD3Q96EY7 MIR561-201ENST00000385216 97 ntBASIC2.4□□□□□ -2.03
PTCD3Q96EY7 RNU2-63P-201ENST00000410792 194 ntBASIC2.4□□□□□ -2.03
PTCD3Q96EY7 EBAG9P1-201ENST00000418955 543 ntBASIC2.4□□□□□ -2.03
PTCD3Q96EY7 EEF1B2P7-201ENST00000451177 676 ntBASIC2.4□□□□□ -2.03
PTCD3Q96EY7 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.4□□□□□ -2.03
PTCD3Q96EY7 AC010409.1-201ENST00000487382 476 ntBASIC2.4□□□□□ -2.03
PTCD3Q96EY7 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.4□□□□□ -2.03
PTCD3Q96EY7 RNU6-561P-201ENST00000516222 102 ntBASIC2.4□□□□□ -2.03
PTCD3Q96EY7 RNU7-121P-201ENST00000516604 62 ntBASIC2.4□□□□□ -2.03
PTCD3Q96EY7 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.4□□□□□ -2.03
PTCD3Q96EY7 AC109810.1-201ENST00000534066 224 ntBASIC2.4□□□□□ -2.03
PTCD3Q96EY7 AC015720.1-201ENST00000565251 277 ntBASIC2.4□□□□□ -2.03
PTCD3Q96EY7 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.4□□□□□ -2.03
PTCD3Q96EY7 U4.3-201ENST00000621047 82 ntBASIC2.4□□□□□ -2.03
PTCD3Q96EY7 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.4□□□□□ -2.03
PTCD3Q96EY7 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
PTCD3Q96EY7 RNU1-22P-201ENST00000363334 158 ntBASIC2.39□□□□□ -2.03
PTCD3Q96EY7 SNORA5B-201ENST00000363786 132 ntBASIC2.39□□□□□ -2.03
PTCD3Q96EY7 SNORD50.2-201ENST00000365465 70 ntBASIC2.39□□□□□ -2.03
PTCD3Q96EY7 RNU6-449P-201ENST00000383914 107 ntBASIC2.39□□□□□ -2.03
PTCD3Q96EY7 AC060773.1-201ENST00000421698 310 ntBASIC2.39□□□□□ -2.03
PTCD3Q96EY7 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.39□□□□□ -2.03
PTCD3Q96EY7 TMSB4XP3-201ENST00000445144 114 ntBASIC2.39□□□□□ -2.03
PTCD3Q96EY7 AC104389.3-201ENST00000445629 235 ntBASIC2.39□□□□□ -2.03
PTCD3Q96EY7 AL109933.2-201ENST00000452651 260 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms