Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 AL356280.1-201ENST00000603614 379 ntBASIC3.57□□□□□ -1.84
VTI1AQ96AJ9 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.57□□□□□ -1.84
VTI1AQ96AJ9 U6.73-201ENST00000619194 103 ntBASIC3.57□□□□□ -1.84
VTI1AQ96AJ9 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
VTI1AQ96AJ9 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
VTI1AQ96AJ9 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
VTI1AQ96AJ9 AL391516.1-201ENST00000554380 2449 ntBASIC3.56□□□□□ -1.84
VTI1AQ96AJ9 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
VTI1AQ96AJ9 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
VTI1AQ96AJ9 RNU1-70P-201ENST00000362618 164 ntBASIC3.56□□□□□ -1.84
VTI1AQ96AJ9 Y_RNA.563-201ENST00000384707 108 ntBASIC3.56□□□□□ -1.84
VTI1AQ96AJ9 RNA5SP293-201ENST00000410527 113 ntBASIC3.56□□□□□ -1.84
VTI1AQ96AJ9 AC063976.3-201ENST00000426849 329 ntBASIC3.56□□□□□ -1.84
VTI1AQ96AJ9 AC107083.1-201ENST00000439643 279 ntBASIC3.56□□□□□ -1.84
VTI1AQ96AJ9 CYP2C59P-201ENST00000457790 269 ntBASIC3.56□□□□□ -1.84
VTI1AQ96AJ9 CKS1BP2-201ENST00000497342 240 ntBASIC3.56□□□□□ -1.84
VTI1AQ96AJ9 RNA5SP217-201ENST00000515959 91 ntBASIC3.56□□□□□ -1.84
VTI1AQ96AJ9 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
VTI1AQ96AJ9 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
VTI1AQ96AJ9 SNORD56.5-201ENST00000364281 72 ntBASIC3.55□□□□□ -1.84
VTI1AQ96AJ9 SNORA25.7-201ENST00000364375 127 ntBASIC3.55□□□□□ -1.84
VTI1AQ96AJ9 Y_RNA.634-201ENST00000364811 113 ntBASIC3.55□□□□□ -1.84
VTI1AQ96AJ9 RPL32P35-201ENST00000415214 394 ntBASIC3.55□□□□□ -1.84
VTI1AQ96AJ9 SNORA4.4-201ENST00000515921 135 ntBASIC3.55□□□□□ -1.84
VTI1AQ96AJ9 MIR2681-201ENST00000581814 105 ntBASIC3.55□□□□□ -1.84
VTI1AQ96AJ9 RPL12P50-201ENST00000603116 116 ntBASIC3.55□□□□□ -1.84
VTI1AQ96AJ9 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.54□□□□□ -1.84
VTI1AQ96AJ9 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.54□□□□□ -1.84
VTI1AQ96AJ9 RNU6-235P-201ENST00000362644 107 ntBASIC3.54□□□□□ -1.84
VTI1AQ96AJ9 U8.1-201ENST00000362843 134 ntBASIC3.54□□□□□ -1.84
VTI1AQ96AJ9 RNU6-301P-201ENST00000384277 107 ntBASIC3.54□□□□□ -1.84
VTI1AQ96AJ9 SNORD15B-201ENST00000384714 146 ntBASIC3.54□□□□□ -1.84
VTI1AQ96AJ9 MIR562-201ENST00000384894 95 ntBASIC3.54□□□□□ -1.84
VTI1AQ96AJ9 MIR1253-201ENST00000408273 105 ntBASIC3.54□□□□□ -1.84
VTI1AQ96AJ9 AL158823.1-201ENST00000418441 478 ntBASIC3.54□□□□□ -1.84
VTI1AQ96AJ9 AL445687.1-201ENST00000439946 251 ntBASIC3.54□□□□□ -1.84
VTI1AQ96AJ9 RNA5SP153-201ENST00000516498 76 ntBASIC3.54□□□□□ -1.84
VTI1AQ96AJ9 MIR2682-201ENST00000580305 110 ntBASIC3.54□□□□□ -1.84
VTI1AQ96AJ9 AC097639.2-201ENST00000603159 172 ntBASIC3.54□□□□□ -1.84
VTI1AQ96AJ9 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC3.54□□□□□ -1.84
VTI1AQ96AJ9 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.53□□□□□ -1.84
VTI1AQ96AJ9 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.53□□□□□ -1.84
VTI1AQ96AJ9 RNU6-834P-201ENST00000362367 110 ntBASIC3.53□□□□□ -1.84
VTI1AQ96AJ9 SNORD56.3-201ENST00000363507 71 ntBASIC3.53□□□□□ -1.84
VTI1AQ96AJ9 RNU2-70P-201ENST00000410718 179 ntBASIC3.53□□□□□ -1.84
VTI1AQ96AJ9 EEF1A1P41-201ENST00000414667 207 ntBASIC3.53□□□□□ -1.84
VTI1AQ96AJ9 AC244505.4-201ENST00000434905 287 ntBASIC3.53□□□□□ -1.84
VTI1AQ96AJ9 HMGN2P34-201ENST00000437647 269 ntBASIC3.53□□□□□ -1.84
VTI1AQ96AJ9 SSXP5-201ENST00000443473 287 ntBASIC3.53□□□□□ -1.84
VTI1AQ96AJ9 RN7SL429P-201ENST00000479090 223 ntBASIC3.53□□□□□ -1.84
VTI1AQ96AJ9 RN7SL489P-201ENST00000486185 223 ntBASIC3.53□□□□□ -1.84
VTI1AQ96AJ9 RN7SL327P-201ENST00000488659 223 ntBASIC3.53□□□□□ -1.84
VTI1AQ96AJ9 AC018868.1-201ENST00000491307 315 ntBASIC3.53□□□□□ -1.84
VTI1AQ96AJ9 Y_RNA.712-201ENST00000517011 92 ntBASIC3.53□□□□□ -1.84
VTI1AQ96AJ9 RNU6-1096P-201ENST00000517089 102 ntBASIC3.53□□□□□ -1.84
VTI1AQ96AJ9 AC073413.2-201ENST00000604332 360 ntBASIC3.53□□□□□ -1.84
VTI1AQ96AJ9 RN7SL853P-201ENST00000617250 223 ntBASIC3.53□□□□□ -1.84
VTI1AQ96AJ9 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
VTI1AQ96AJ9 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.85
VTI1AQ96AJ9 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
VTI1AQ96AJ9 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.52□□□□□ -1.85
VTI1AQ96AJ9 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
VTI1AQ96AJ9 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
VTI1AQ96AJ9 MIR449A-201ENST00000362113 91 ntBASIC3.52□□□□□ -1.85
VTI1AQ96AJ9 SNORA7.4-201ENST00000384249 137 ntBASIC3.52□□□□□ -1.85
VTI1AQ96AJ9 MIR592-201ENST00000384959 97 ntBASIC3.52□□□□□ -1.85
VTI1AQ96AJ9 RNU6-220P-201ENST00000390919 107 ntBASIC3.52□□□□□ -1.85
VTI1AQ96AJ9 RNU2-52P-201ENST00000410680 190 ntBASIC3.52□□□□□ -1.85
VTI1AQ96AJ9 RNA5SP229-201ENST00000410809 99 ntBASIC3.52□□□□□ -1.85
VTI1AQ96AJ9 UBBP3-201ENST00000445497 241 ntBASIC3.52□□□□□ -1.85
VTI1AQ96AJ9 RPS29P21-201ENST00000496272 170 ntBASIC3.52□□□□□ -1.85
VTI1AQ96AJ9 RNU7-149P-201ENST00000516739 59 ntBASIC3.52□□□□□ -1.85
VTI1AQ96AJ9 AC090049.2-201ENST00000550377 109 ntBASIC3.52□□□□□ -1.85
VTI1AQ96AJ9 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.52□□□□□ -1.85
VTI1AQ96AJ9 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC3.52□□□□□ -1.85
VTI1AQ96AJ9 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.52□□□□□ -1.85
VTI1AQ96AJ9 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.52□□□□□ -1.85
VTI1AQ96AJ9 RNU1-96P-201ENST00000364163 162 ntBASIC3.51□□□□□ -1.85
VTI1AQ96AJ9 RNU6-429P-201ENST00000384582 108 ntBASIC3.51□□□□□ -1.85
VTI1AQ96AJ9 RN7SKP179-201ENST00000516126 217 ntBASIC3.51□□□□□ -1.85
VTI1AQ96AJ9 RNA5SP76-201ENST00000516277 87 ntBASIC3.51□□□□□ -1.85
VTI1AQ96AJ9 RNU7-128P-201ENST00000517247 62 ntBASIC3.51□□□□□ -1.85
VTI1AQ96AJ9 uc_338.25-201ENST00000613756 156 ntBASIC3.51□□□□□ -1.85
VTI1AQ96AJ9 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
VTI1AQ96AJ9 Y_RNA.280-201ENST00000364765 112 ntBASIC3.5□□□□□ -1.85
VTI1AQ96AJ9 RNU6-1056P-201ENST00000383996 107 ntBASIC3.5□□□□□ -1.85
VTI1AQ96AJ9 AL031121.1-201ENST00000406553 254 ntBASIC3.5□□□□□ -1.85
VTI1AQ96AJ9 RNU6-1186P-201ENST00000410429 97 ntBASIC3.5□□□□□ -1.85
VTI1AQ96AJ9 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.5□□□□□ -1.85
VTI1AQ96AJ9 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC3.5□□□□□ -1.85
VTI1AQ96AJ9 RPS27P29-201ENST00000463110 252 ntBASIC3.5□□□□□ -1.85
VTI1AQ96AJ9 AC092185.1-201ENST00000491371 97 ntBASIC3.5□□□□□ -1.85
VTI1AQ96AJ9 AC011406.1-201ENST00000512440 370 ntBASIC3.5□□□□□ -1.85
VTI1AQ96AJ9 SCARNA20.6-201ENST00000517251 106 ntBASIC3.5□□□□□ -1.85
VTI1AQ96AJ9 RNU2-60P-201ENST00000517290 128 ntBASIC3.5□□□□□ -1.85
VTI1AQ96AJ9 AL355297.2-201ENST00000604792 129 ntBASIC3.5□□□□□ -1.85
VTI1AQ96AJ9 Pinc.1-201ENST00000616452 154 ntBASIC3.5□□□□□ -1.85
VTI1AQ96AJ9 AL161431.1-201ENST00000618966 4205 ntBASIC3.49□□□□□ -1.85
VTI1AQ96AJ9 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
VTI1AQ96AJ9 snoU2-30.2-201ENST00000362805 70 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms