Protein–RNA interactions for Protein: Q8TE77

SSH3, Protein phosphatase Slingshot homolog 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3Q8TE77 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SSH3Q8TE77 Y_RNA.240-201ENST00000364469 95 ntBASIC2.56□□□□□ -2
SSH3Q8TE77 MIR561-201ENST00000385216 97 ntBASIC2.56□□□□□ -2
SSH3Q8TE77 AL357139.1-201ENST00000407792 426 ntBASIC2.56□□□□□ -2
SSH3Q8TE77 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.56□□□□□ -2
SSH3Q8TE77 Y_RNA.662-201ENST00000516028 97 ntBASIC2.56□□□□□ -2
SSH3Q8TE77 SNORA48.11-201ENST00000517015 89 ntBASIC2.56□□□□□ -2
SSH3Q8TE77 AC136628.3-201ENST00000521868 290 ntBASIC2.56□□□□□ -2
SSH3Q8TE77 MIR4753-201ENST00000585119 83 ntBASIC2.56□□□□□ -2
SSH3Q8TE77 U6.106-201ENST00000636360 105 ntBASIC2.56□□□□□ -2
SSH3Q8TE77 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SSH3Q8TE77 U8.2-201ENST00000363156 134 ntBASIC2.55□□□□□ -2
SSH3Q8TE77 RNU6-746P-201ENST00000384112 109 ntBASIC2.55□□□□□ -2
SSH3Q8TE77 SNORA80E-201ENST00000384744 137 ntBASIC2.55□□□□□ -2
SSH3Q8TE77 SNORA26.5-201ENST00000391215 123 ntBASIC2.55□□□□□ -2
SSH3Q8TE77 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
SSH3Q8TE77 U8.19-201ENST00000459095 133 ntBASIC2.55□□□□□ -2
SSH3Q8TE77 AC114982.1-201ENST00000469402 321 ntBASIC2.55□□□□□ -2
SSH3Q8TE77 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.55□□□□□ -2
SSH3Q8TE77 RNU6-1219P-201ENST00000516143 112 ntBASIC2.55□□□□□ -2
SSH3Q8TE77 SNORA31.11-201ENST00000516528 139 ntBASIC2.55□□□□□ -2
SSH3Q8TE77 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.55□□□□□ -2
SSH3Q8TE77 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.55□□□□□ -2
SSH3Q8TE77 AC100767.1-201ENST00000528178 123 ntBASIC2.55□□□□□ -2
SSH3Q8TE77 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.55□□□□□ -2
SSH3Q8TE77 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.55□□□□□ -2
SSH3Q8TE77 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.54□□□□□ -2
SSH3Q8TE77 ZNF355P-201ENST00000427301 3216 ntBASIC2.54□□□□□ -2
SSH3Q8TE77 RNU6-774P-201ENST00000363238 107 ntBASIC2.54□□□□□ -2
SSH3Q8TE77 SNORD31B-201ENST00000364977 69 ntBASIC2.54□□□□□ -2
SSH3Q8TE77 Y_RNA.368-201ENST00000365547 113 ntBASIC2.54□□□□□ -2
SSH3Q8TE77 RNU4-17P-201ENST00000365598 141 ntBASIC2.54□□□□□ -2
SSH3Q8TE77 SNORA72.4-201ENST00000384174 132 ntBASIC2.54□□□□□ -2
SSH3Q8TE77 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.54□□□□□ -2
SSH3Q8TE77 RNU6-855P-201ENST00000410395 104 ntBASIC2.54□□□□□ -2
SSH3Q8TE77 AC074290.1-201ENST00000448883 135 ntBASIC2.54□□□□□ -2
SSH3Q8TE77 RNU7-57P-201ENST00000459540 60 ntBASIC2.54□□□□□ -2
SSH3Q8TE77 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.54□□□□□ -2
SSH3Q8TE77 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.54□□□□□ -2
SSH3Q8TE77 SNORA70.12-201ENST00000516084 153 ntBASIC2.54□□□□□ -2
SSH3Q8TE77 SUMO2P18-201ENST00000518873 252 ntBASIC2.54□□□□□ -2
SSH3Q8TE77 MIR3684-201ENST00000579779 74 ntBASIC2.54□□□□□ -2
SSH3Q8TE77 AC078899.2-201ENST00000595282 212 ntBASIC2.54□□□□□ -2
SSH3Q8TE77 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SSH3Q8TE77 SNORA3A-201ENST00000364113 130 ntBASIC2.53□□□□□ -2
SSH3Q8TE77 Y_RNA.287-201ENST00000364853 94 ntBASIC2.53□□□□□ -2
SSH3Q8TE77 Y_RNA.456-201ENST00000384232 111 ntBASIC2.53□□□□□ -2
SSH3Q8TE77 RNU6-975P-201ENST00000384296 105 ntBASIC2.53□□□□□ -2
SSH3Q8TE77 MIR95-201ENST00000385072 81 ntBASIC2.53□□□□□ -2
SSH3Q8TE77 SNORA40.19-201ENST00000390846 128 ntBASIC2.53□□□□□ -2
SSH3Q8TE77 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.53□□□□□ -2
SSH3Q8TE77 AC016925.1-201ENST00000458303 298 ntBASIC2.53□□□□□ -2
SSH3Q8TE77 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.53□□□□□ -2
SSH3Q8TE77 AC025754.2-201ENST00000606491 432 ntBASIC2.53□□□□□ -2
SSH3Q8TE77 AC013791.1-201ENST00000616619 62 ntBASIC2.53□□□□□ -2
SSH3Q8TE77 snoZ196.1-201ENST00000625269 89 ntBASIC2.53□□□□□ -2
SSH3Q8TE77 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SSH3Q8TE77 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.52□□□□□ -2.01
SSH3Q8TE77 SNORD114-7-201ENST00000362520 77 ntBASIC2.52□□□□□ -2.01
SSH3Q8TE77 Y_RNA.124-201ENST00000363339 93 ntBASIC2.52□□□□□ -2.01
SSH3Q8TE77 RNU6-1048P-201ENST00000364054 107 ntBASIC2.52□□□□□ -2.01
SSH3Q8TE77 RNA5SP160-201ENST00000364866 120 ntBASIC2.52□□□□□ -2.01
SSH3Q8TE77 Y_RNA.310-201ENST00000365063 113 ntBASIC2.52□□□□□ -2.01
SSH3Q8TE77 Y_RNA.341-201ENST00000365341 102 ntBASIC2.52□□□□□ -2.01
SSH3Q8TE77 RNU1-148P-201ENST00000384472 162 ntBASIC2.52□□□□□ -2.01
SSH3Q8TE77 Y_RNA.571-201ENST00000384753 98 ntBASIC2.52□□□□□ -2.01
SSH3Q8TE77 AL355796.1-201ENST00000406706 323 ntBASIC2.52□□□□□ -2.01
SSH3Q8TE77 RPL23AP7-203ENST00000449021 469 ntBASIC2.52□□□□□ -2.01
SSH3Q8TE77 RNU6-221P-201ENST00000459541 99 ntBASIC2.52□□□□□ -2.01
SSH3Q8TE77 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.52□□□□□ -2.01
SSH3Q8TE77 RNU6-965P-201ENST00000516721 96 ntBASIC2.52□□□□□ -2.01
SSH3Q8TE77 Y_RNA.703-201ENST00000516846 111 ntBASIC2.52□□□□□ -2.01
SSH3Q8TE77 CYCSP26-201ENST00000534107 320 ntBASIC2.52□□□□□ -2.01
SSH3Q8TE77 MRPS18CP4-201ENST00000535821 231 ntBASIC2.52□□□□□ -2.01
SSH3Q8TE77 PRELID2P1-201ENST00000552837 301 ntBASIC2.52□□□□□ -2.01
SSH3Q8TE77 MIR5089-201ENST00000580047 84 ntBASIC2.52□□□□□ -2.01
SSH3Q8TE77 Y_RNA.783-201ENST00000613546 102 ntBASIC2.52□□□□□ -2.01
SSH3Q8TE77 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.52□□□□□ -2.01
SSH3Q8TE77 MIR1248-201ENST00000629190 106 ntBASIC2.52□□□□□ -2.01
SSH3Q8TE77 AC068700.1-201ENST00000565862 3754 ntBASIC2.52□□□□□ -2.01
SSH3Q8TE77 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.51□□□□□ -2.01
SSH3Q8TE77 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.51□□□□□ -2.01
SSH3Q8TE77 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
SSH3Q8TE77 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.51□□□□□ -2.01
SSH3Q8TE77 SNORD14D-201ENST00000384390 87 ntBASIC2.51□□□□□ -2.01
SSH3Q8TE77 MIR873-201ENST00000401120 77 ntBASIC2.51□□□□□ -2.01
SSH3Q8TE77 AL355497.1-201ENST00000406262 551 ntBASIC2.51□□□□□ -2.01
SSH3Q8TE77 RN7SKP284-201ENST00000411002 343 ntBASIC2.51□□□□□ -2.01
SSH3Q8TE77 RNU6-57P-201ENST00000411348 103 ntBASIC2.51□□□□□ -2.01
SSH3Q8TE77 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SSH3Q8TE77 AL392103.1-201ENST00000447000 198 ntBASIC2.51□□□□□ -2.01
SSH3Q8TE77 AL021397.1-201ENST00000451806 248 ntBASIC2.51□□□□□ -2.01
SSH3Q8TE77 AC025033.1-201ENST00000463883 194 ntBASIC2.51□□□□□ -2.01
SSH3Q8TE77 RNU6-1278P-201ENST00000516130 107 ntBASIC2.51□□□□□ -2.01
SSH3Q8TE77 RNU6-406P-201ENST00000516470 107 ntBASIC2.51□□□□□ -2.01
SSH3Q8TE77 AC022616.8-201ENST00000533569 253 ntBASIC2.51□□□□□ -2.01
SSH3Q8TE77 MIR3133-201ENST00000583157 78 ntBASIC2.51□□□□□ -2.01
SSH3Q8TE77 AC021753.1-201ENST00000635724 168 ntBASIC2.51□□□□□ -2.01
SSH3Q8TE77 AL159152.1-201ENST00000635019 2587 ntBASIC2.51□□□□□ -2.01
SSH3Q8TE77 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms