Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 RNU6-1146P-201ENST00000516282 102 ntBASIC2.62□□□□□ -1.99
HIPK4Q8NE63 RN7SKP57-201ENST00000517248 293 ntBASIC2.62□□□□□ -1.99
HIPK4Q8NE63 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.62□□□□□ -1.99
HIPK4Q8NE63 AL929325.1-201ENST00000603096 117 ntBASIC2.62□□□□□ -1.99
HIPK4Q8NE63 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
HIPK4Q8NE63 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.62□□□□□ -1.99
HIPK4Q8NE63 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.62□□□□□ -1.99
HIPK4Q8NE63 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
HIPK4Q8NE63 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
HIPK4Q8NE63 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.61□□□□□ -1.99
HIPK4Q8NE63 RNU6-239P-201ENST00000390990 99 ntBASIC2.61□□□□□ -1.99
HIPK4Q8NE63 RNU6-1228P-201ENST00000391014 107 ntBASIC2.61□□□□□ -1.99
HIPK4Q8NE63 AL117342.1-201ENST00000404861 406 ntBASIC2.61□□□□□ -1.99
HIPK4Q8NE63 RN7SKP101-201ENST00000411376 320 ntBASIC2.61□□□□□ -1.99
HIPK4Q8NE63 AC245102.2-201ENST00000448956 180 ntBASIC2.61□□□□□ -1.99
HIPK4Q8NE63 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.61□□□□□ -1.99
HIPK4Q8NE63 RNU7-26P-201ENST00000458980 63 ntBASIC2.61□□□□□ -1.99
HIPK4Q8NE63 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.61□□□□□ -1.99
HIPK4Q8NE63 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.61□□□□□ -1.99
HIPK4Q8NE63 LARP7P3-201ENST00000579888 337 ntBASIC2.61□□□□□ -1.99
HIPK4Q8NE63 MIR5194-201ENST00000582634 120 ntBASIC2.61□□□□□ -1.99
HIPK4Q8NE63 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.61□□□□□ -1.99
HIPK4Q8NE63 AC073413.2-201ENST00000604332 360 ntBASIC2.61□□□□□ -1.99
HIPK4Q8NE63 AL021707.8-201ENST00000609428 183 ntBASIC2.61□□□□□ -1.99
HIPK4Q8NE63 MIR8057-201ENST00000620957 69 ntBASIC2.61□□□□□ -1.99
HIPK4Q8NE63 MTND1P7-201ENST00000632801 297 ntBASIC2.61□□□□□ -1.99
HIPK4Q8NE63 U6.108-201ENST00000637764 58 ntBASIC2.61□□□□□ -1.99
HIPK4Q8NE63 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
HIPK4Q8NE63 SNORA33-201ENST00000363664 130 ntBASIC2.6□□□□□ -1.99
HIPK4Q8NE63 SNORA70.4-201ENST00000365509 134 ntBASIC2.6□□□□□ -1.99
HIPK4Q8NE63 RNU6-449P-201ENST00000383914 107 ntBASIC2.6□□□□□ -1.99
HIPK4Q8NE63 RNU6-160P-201ENST00000384591 107 ntBASIC2.6□□□□□ -1.99
HIPK4Q8NE63 RNA5SP467-201ENST00000391274 118 ntBASIC2.6□□□□□ -1.99
HIPK4Q8NE63 RNU6-1186P-201ENST00000410429 97 ntBASIC2.6□□□□□ -1.99
HIPK4Q8NE63 RNA5SP341-201ENST00000516261 117 ntBASIC2.6□□□□□ -1.99
HIPK4Q8NE63 RNU7-121P-201ENST00000516604 62 ntBASIC2.6□□□□□ -1.99
HIPK4Q8NE63 AL161756.2-201ENST00000604597 246 ntBASIC2.6□□□□□ -1.99
HIPK4Q8NE63 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.6□□□□□ -1.99
HIPK4Q8NE63 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.6□□□□□ -1.99
HIPK4Q8NE63 RNU6-1164P-201ENST00000364428 107 ntBASIC2.59□□□□□ -1.99
HIPK4Q8NE63 RNU6-818P-201ENST00000364837 108 ntBASIC2.59□□□□□ -1.99
HIPK4Q8NE63 MIR15B-201ENST00000385045 98 ntBASIC2.59□□□□□ -1.99
HIPK4Q8NE63 RNA5SP181-201ENST00000410246 98 ntBASIC2.59□□□□□ -1.99
HIPK4Q8NE63 RN7SKP284-201ENST00000411002 343 ntBASIC2.59□□□□□ -1.99
HIPK4Q8NE63 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.59□□□□□ -1.99
HIPK4Q8NE63 ATP5J2P3-201ENST00000451550 258 ntBASIC2.59□□□□□ -1.99
HIPK4Q8NE63 RNU7-99P-201ENST00000516271 62 ntBASIC2.59□□□□□ -1.99
HIPK4Q8NE63 SNORA74D-201ENST00000516404 141 ntBASIC2.59□□□□□ -1.99
HIPK4Q8NE63 AC007229.1-201ENST00000590455 412 ntBASIC2.59□□□□□ -1.99
HIPK4Q8NE63 AC022202.1-201ENST00000613515 211 ntBASIC2.59□□□□□ -1.99
HIPK4Q8NE63 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.59□□□□□ -1.99
HIPK4Q8NE63 U2.22-201ENST00000636441 106 ntBASIC2.59□□□□□ -1.99
HIPK4Q8NE63 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
HIPK4Q8NE63 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.58□□□□□ -2
HIPK4Q8NE63 Y_RNA.203-201ENST00000364106 102 ntBASIC2.58□□□□□ -2
HIPK4Q8NE63 RNU4-41P-201ENST00000364426 143 ntBASIC2.58□□□□□ -2
HIPK4Q8NE63 SNORD50.2-201ENST00000365465 70 ntBASIC2.58□□□□□ -2
HIPK4Q8NE63 RNY3P5-201ENST00000384127 102 ntBASIC2.58□□□□□ -2
HIPK4Q8NE63 MIR491-201ENST00000384877 84 ntBASIC2.58□□□□□ -2
HIPK4Q8NE63 MIR613-201ENST00000385248 95 ntBASIC2.58□□□□□ -2
HIPK4Q8NE63 RNA5SP496-201ENST00000391240 109 ntBASIC2.58□□□□□ -2
HIPK4Q8NE63 AL121914.1-201ENST00000450188 156 ntBASIC2.58□□□□□ -2
HIPK4Q8NE63 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.58□□□□□ -2
HIPK4Q8NE63 RPS29P21-201ENST00000496272 170 ntBASIC2.58□□□□□ -2
HIPK4Q8NE63 RN7SL636P-201ENST00000497504 294 ntBASIC2.58□□□□□ -2
HIPK4Q8NE63 RNU6-1096P-201ENST00000517089 102 ntBASIC2.58□□□□□ -2
HIPK4Q8NE63 RNU1-104P-201ENST00000517280 175 ntBASIC2.58□□□□□ -2
HIPK4Q8NE63 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.58□□□□□ -2
HIPK4Q8NE63 CYCSP26-201ENST00000534107 320 ntBASIC2.58□□□□□ -2
HIPK4Q8NE63 AC011604.1-201ENST00000545978 196 ntBASIC2.58□□□□□ -2
HIPK4Q8NE63 MIR3169-201ENST00000578032 83 ntBASIC2.58□□□□□ -2
HIPK4Q8NE63 MIR4658-201ENST00000584344 65 ntBASIC2.58□□□□□ -2
HIPK4Q8NE63 AC091178.2-201ENST00000584401 117 ntBASIC2.58□□□□□ -2
HIPK4Q8NE63 AC100821.1-201ENST00000523153 2479 ntBASIC2.57□□□□□ -2
HIPK4Q8NE63 SNORA38-201ENST00000363946 132 ntBASIC2.57□□□□□ -2
HIPK4Q8NE63 RNA5SP493-201ENST00000364115 91 ntBASIC2.57□□□□□ -2
HIPK4Q8NE63 RNU6-704P-201ENST00000364162 103 ntBASIC2.57□□□□□ -2
HIPK4Q8NE63 Y_RNA.400-201ENST00000383963 111 ntBASIC2.57□□□□□ -2
HIPK4Q8NE63 RNU6-643P-201ENST00000384018 107 ntBASIC2.57□□□□□ -2
HIPK4Q8NE63 RNU1-138P-201ENST00000384093 164 ntBASIC2.57□□□□□ -2
HIPK4Q8NE63 RNU1-148P-201ENST00000384472 162 ntBASIC2.57□□□□□ -2
HIPK4Q8NE63 SNORA11.1-201ENST00000408133 129 ntBASIC2.57□□□□□ -2
HIPK4Q8NE63 AC063976.3-201ENST00000426849 329 ntBASIC2.57□□□□□ -2
HIPK4Q8NE63 YWHAEP4-201ENST00000505390 198 ntBASIC2.57□□□□□ -2
HIPK4Q8NE63 AC107027.2-201ENST00000512197 115 ntBASIC2.57□□□□□ -2
HIPK4Q8NE63 SNORD116-25-201ENST00000516517 92 ntBASIC2.57□□□□□ -2
HIPK4Q8NE63 AL359075.3-201ENST00000613288 217 ntBASIC2.57□□□□□ -2
HIPK4Q8NE63 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.57□□□□□ -2
HIPK4Q8NE63 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.56□□□□□ -2
HIPK4Q8NE63 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
HIPK4Q8NE63 RNU6-728P-201ENST00000365375 104 ntBASIC2.56□□□□□ -2
HIPK4Q8NE63 SNORA19-201ENST00000384737 128 ntBASIC2.56□□□□□ -2
HIPK4Q8NE63 MIR520G-201ENST00000385064 90 ntBASIC2.56□□□□□ -2
HIPK4Q8NE63 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.56□□□□□ -2
HIPK4Q8NE63 RNU4-43P-201ENST00000410628 137 ntBASIC2.56□□□□□ -2
HIPK4Q8NE63 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.56□□□□□ -2
HIPK4Q8NE63 TMSB4XP3-201ENST00000445144 114 ntBASIC2.56□□□□□ -2
HIPK4Q8NE63 SNORA31.15-201ENST00000516771 132 ntBASIC2.56□□□□□ -2
HIPK4Q8NE63 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.56□□□□□ -2
HIPK4Q8NE63 MIR4446-201ENST00000578505 67 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 149 ms