Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
NPAS3Q8IXF0 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.67□□□□□ -1.82
NPAS3Q8IXF0 RNU1-18P-201ENST00000363062 164 ntBASIC3.67□□□□□ -1.82
NPAS3Q8IXF0 SNORD32B-201ENST00000364460 84 ntBASIC3.67□□□□□ -1.82
NPAS3Q8IXF0 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
NPAS3Q8IXF0 RNU6-748P-201ENST00000384648 107 ntBASIC3.67□□□□□ -1.82
NPAS3Q8IXF0 MIR147B-201ENST00000390185 80 ntBASIC3.67□□□□□ -1.82
NPAS3Q8IXF0 AL138878.1-201ENST00000405131 347 ntBASIC3.67□□□□□ -1.82
NPAS3Q8IXF0 RNU4-37P-201ENST00000410214 84 ntBASIC3.67□□□□□ -1.82
NPAS3Q8IXF0 AL441985.1-201ENST00000457727 251 ntBASIC3.67□□□□□ -1.82
NPAS3Q8IXF0 RN7SL93P-201ENST00000463035 293 ntBASIC3.67□□□□□ -1.82
NPAS3Q8IXF0 RPL30P14-201ENST00000482744 348 ntBASIC3.67□□□□□ -1.82
NPAS3Q8IXF0 RNU6-523P-201ENST00000516304 54 ntBASIC3.67□□□□□ -1.82
NPAS3Q8IXF0 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.67□□□□□ -1.82
NPAS3Q8IXF0 AC002984.1-201ENST00000591692 448 ntBASIC3.67□□□□□ -1.82
NPAS3Q8IXF0 AC012493.2-201ENST00000595083 291 ntBASIC3.67□□□□□ -1.82
NPAS3Q8IXF0 Y_RNA.788-201ENST00000622394 112 ntBASIC3.67□□□□□ -1.82
NPAS3Q8IXF0 AC091932.4-201ENST00000623386 200 ntBASIC3.67□□□□□ -1.82
NPAS3Q8IXF0 AL512310.12-203ENST00000640543 90 ntBASIC3.67□□□□□ -1.82
NPAS3Q8IXF0 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NPAS3Q8IXF0 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NPAS3Q8IXF0 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.67□□□□□ -1.82
NPAS3Q8IXF0 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.67□□□□□ -1.82
NPAS3Q8IXF0 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NPAS3Q8IXF0 ZNF271P-202ENST00000465539 1970 ntBASIC3.66□□□□□ -1.82
NPAS3Q8IXF0 Y_RNA.37-201ENST00000362606 108 ntBASIC3.66□□□□□ -1.82
NPAS3Q8IXF0 Y_RNA.430-201ENST00000384081 110 ntBASIC3.66□□□□□ -1.82
NPAS3Q8IXF0 RNU1-57P-201ENST00000384491 166 ntBASIC3.66□□□□□ -1.82
NPAS3Q8IXF0 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
NPAS3Q8IXF0 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.66□□□□□ -1.82
NPAS3Q8IXF0 RNU6-1291P-201ENST00000516591 104 ntBASIC3.66□□□□□ -1.82
NPAS3Q8IXF0 AC004812.1-201ENST00000540773 146 ntBASIC3.66□□□□□ -1.82
NPAS3Q8IXF0 RNU6-86P-201ENST00000606534 107 ntBASIC3.66□□□□□ -1.82
NPAS3Q8IXF0 AC073308.1-201ENST00000623696 305 ntBASIC3.66□□□□□ -1.82
NPAS3Q8IXF0 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.66□□□□□ -1.82
NPAS3Q8IXF0 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NPAS3Q8IXF0 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.66□□□□□ -1.82
NPAS3Q8IXF0 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NPAS3Q8IXF0 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
NPAS3Q8IXF0 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
NPAS3Q8IXF0 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
NPAS3Q8IXF0 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.65□□□□□ -1.82
NPAS3Q8IXF0 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.65□□□□□ -1.82
NPAS3Q8IXF0 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.65□□□□□ -1.82
NPAS3Q8IXF0 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
NPAS3Q8IXF0 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.65□□□□□ -1.82
NPAS3Q8IXF0 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.65□□□□□ -1.83
NPAS3Q8IXF0 SNORD115-28-201ENST00000363931 81 ntBASIC3.65□□□□□ -1.83
NPAS3Q8IXF0 Y_RNA.377-201ENST00000365644 108 ntBASIC3.65□□□□□ -1.83
NPAS3Q8IXF0 Y_RNA.440-201ENST00000384120 114 ntBASIC3.65□□□□□ -1.83
NPAS3Q8IXF0 MIR124-3-201ENST00000384866 87 ntBASIC3.65□□□□□ -1.83
NPAS3Q8IXF0 RN7SKP200-201ENST00000410564 320 ntBASIC3.65□□□□□ -1.83
NPAS3Q8IXF0 RNU6-948P-201ENST00000516374 107 ntBASIC3.65□□□□□ -1.83
NPAS3Q8IXF0 RNU6-539P-201ENST00000516665 103 ntBASIC3.65□□□□□ -1.83
NPAS3Q8IXF0 MIR4778-201ENST00000577635 80 ntBASIC3.65□□□□□ -1.83
NPAS3Q8IXF0 AC096720.1-201ENST00000604441 183 ntBASIC3.65□□□□□ -1.83
NPAS3Q8IXF0 RNA5SP108-201ENST00000605921 117 ntBASIC3.65□□□□□ -1.83
NPAS3Q8IXF0 MIR376B-201ENST00000614515 100 ntBASIC3.65□□□□□ -1.83
NPAS3Q8IXF0 uc_338.32-201ENST00000615087 172 ntBASIC3.65□□□□□ -1.83
NPAS3Q8IXF0 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.65□□□□□ -1.83
NPAS3Q8IXF0 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
NPAS3Q8IXF0 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.65□□□□□ -1.83
NPAS3Q8IXF0 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.83
NPAS3Q8IXF0 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NPAS3Q8IXF0 AC007656.2-201ENST00000624902 4547 ntBASIC3.64□□□□□ -1.83
NPAS3Q8IXF0 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
NPAS3Q8IXF0 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NPAS3Q8IXF0 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
NPAS3Q8IXF0 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.64□□□□□ -1.83
NPAS3Q8IXF0 IGKV2-26-201ENST00000518305 343 ntBASIC3.64□□□□□ -1.83
NPAS3Q8IXF0 AC091544.4-201ENST00000555268 342 ntBASIC3.64□□□□□ -1.83
NPAS3Q8IXF0 RNU6-91P-201ENST00000607774 107 ntBASIC3.64□□□□□ -1.83
NPAS3Q8IXF0 AC090517.3-201ENST00000625170 141 ntBASIC3.64□□□□□ -1.83
NPAS3Q8IXF0 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.64□□□□□ -1.83
NPAS3Q8IXF0 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NPAS3Q8IXF0 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.63□□□□□ -1.83
NPAS3Q8IXF0 AL136964.1-201ENST00000622038 2990 ntBASIC3.63□□□□□ -1.83
NPAS3Q8IXF0 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.63□□□□□ -1.83
NPAS3Q8IXF0 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
NPAS3Q8IXF0 AC010680.1-201ENST00000590024 3590 ntBASIC3.63□□□□□ -1.83
NPAS3Q8IXF0 MIR126-201ENST00000362291 85 ntBASIC3.63□□□□□ -1.83
NPAS3Q8IXF0 MTND4LP19-201ENST00000403051 166 ntBASIC3.63□□□□□ -1.83
NPAS3Q8IXF0 AC023141.4-201ENST00000412031 328 ntBASIC3.63□□□□□ -1.83
NPAS3Q8IXF0 AC093729.1-201ENST00000513074 128 ntBASIC3.63□□□□□ -1.83
NPAS3Q8IXF0 RNU6-579P-201ENST00000516879 102 ntBASIC3.63□□□□□ -1.83
NPAS3Q8IXF0 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.63□□□□□ -1.83
NPAS3Q8IXF0 MIR4644-201ENST00000579929 84 ntBASIC3.63□□□□□ -1.83
NPAS3Q8IXF0 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.63□□□□□ -1.83
NPAS3Q8IXF0 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.63□□□□□ -1.83
NPAS3Q8IXF0 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.63□□□□□ -1.83
NPAS3Q8IXF0 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NPAS3Q8IXF0 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
NPAS3Q8IXF0 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.63□□□□□ -1.83
NPAS3Q8IXF0 AC000403.1-201ENST00000613696 3585 ntBASIC3.62□□□□□ -1.83
NPAS3Q8IXF0 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.62□□□□□ -1.83
NPAS3Q8IXF0 AP001486.2-201ENST00000561652 5113 ntBASIC3.62□□□□□ -1.83
NPAS3Q8IXF0 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
NPAS3Q8IXF0 AC008264.2-201ENST00000610193 3731 ntBASIC3.62□□□□□ -1.83
NPAS3Q8IXF0 RNA5SP144-201ENST00000410846 116 ntBASIC3.62□□□□□ -1.83
NPAS3Q8IXF0 AL022718.1-201ENST00000412004 84 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms