Protein–RNA interactions for Protein: Q5TA78

LCE4A, Late cornified envelope protein 4A, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE4AQ5TA78 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC1.73□□□□□ -2.13
LCE4AQ5TA78 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC1.73□□□□□ -2.13
LCE4AQ5TA78 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC1.73□□□□□ -2.13
LCE4AQ5TA78 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC1.73□□□□□ -2.13
LCE4AQ5TA78 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
LCE4AQ5TA78 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
LCE4AQ5TA78 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
LCE4AQ5TA78 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC1.72□□□□□ -2.13
LCE4AQ5TA78 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
LCE4AQ5TA78 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
LCE4AQ5TA78 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
LCE4AQ5TA78 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
LCE4AQ5TA78 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
LCE4AQ5TA78 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
LCE4AQ5TA78 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
LCE4AQ5TA78 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC1.72□□□□□ -2.13
LCE4AQ5TA78 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
LCE4AQ5TA78 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC1.72□□□□□ -2.13
LCE4AQ5TA78 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC1.72□□□□□ -2.13
LCE4AQ5TA78 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC1.72□□□□□ -2.13
LCE4AQ5TA78 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC1.72□□□□□ -2.13
LCE4AQ5TA78 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
LCE4AQ5TA78 CKAP2L-201ENST00000302450 4533 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
LCE4AQ5TA78 DOCK11P1-201ENST00000553480 5932 ntBASIC1.72□□□□□ -2.13
LCE4AQ5TA78 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC1.72□□□□□ -2.13
LCE4AQ5TA78 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
LCE4AQ5TA78 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
LCE4AQ5TA78 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
LCE4AQ5TA78 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
LCE4AQ5TA78 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC1.72□□□□□ -2.13
LCE4AQ5TA78 AC112198.2-201ENST00000426589 6996 ntBASIC1.72□□□□□ -2.13
LCE4AQ5TA78 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
LCE4AQ5TA78 SNORD114-4-201ENST00000363962 75 ntBASIC1.72□□□□□ -2.13
LCE4AQ5TA78 RNU6-580P-201ENST00000365159 107 ntBASIC1.72□□□□□ -2.13
LCE4AQ5TA78 RNU6-1279P-201ENST00000383917 103 ntBASIC1.72□□□□□ -2.13
LCE4AQ5TA78 MIR600-201ENST00000385007 98 ntBASIC1.72□□□□□ -2.13
LCE4AQ5TA78 MIR134-201ENST00000385258 73 ntBASIC1.72□□□□□ -2.13
LCE4AQ5TA78 RNA5SP332-201ENST00000391063 115 ntBASIC1.72□□□□□ -2.13
LCE4AQ5TA78 TMEM183AP1-205ENST00000432739 290 ntBASIC1.72□□□□□ -2.13
LCE4AQ5TA78 AC067940.1-201ENST00000458411 300 ntBASIC1.72□□□□□ -2.13
LCE4AQ5TA78 ACA64.4-201ENST00000459070 127 ntBASIC1.72□□□□□ -2.13
LCE4AQ5TA78 RN7SL274P-201ENST00000492268 272 ntBASIC1.72□□□□□ -2.13
LCE4AQ5TA78 RPL29P14-201ENST00000495837 428 ntBASIC1.72□□□□□ -2.13
LCE4AQ5TA78 AC023424.1-201ENST00000496058 459 ntBASIC1.72□□□□□ -2.13
LCE4AQ5TA78 AC140172.1-201ENST00000502928 141 ntBASIC1.72□□□□□ -2.13
LCE4AQ5TA78 RNA5SP464-201ENST00000516251 108 ntBASIC1.72□□□□□ -2.13
LCE4AQ5TA78 RNU7-160P-201ENST00000516660 62 ntBASIC1.72□□□□□ -2.13
LCE4AQ5TA78 SCARNA13-201ENST00000516672 275 ntBASIC1.72□□□□□ -2.13
LCE4AQ5TA78 MIR2117-201ENST00000516780 80 ntBASIC1.72□□□□□ -2.13
LCE4AQ5TA78 AC007224.1-201ENST00000564410 144 ntBASIC1.72□□□□□ -2.13
LCE4AQ5TA78 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
LCE4AQ5TA78 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
LCE4AQ5TA78 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
LCE4AQ5TA78 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC1.72□□□□□ -2.13
LCE4AQ5TA78 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
LCE4AQ5TA78 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
LCE4AQ5TA78 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
LCE4AQ5TA78 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
LCE4AQ5TA78 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC1.72□□□□□ -2.13
LCE4AQ5TA78 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
LCE4AQ5TA78 AC080100.1-201ENST00000624239 5356 ntBASIC1.72□□□□□ -2.13
LCE4AQ5TA78 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
LCE4AQ5TA78 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
LCE4AQ5TA78 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
LCE4AQ5TA78 AC087190.4-201ENST00000574616 8334 ntBASIC1.72□□□□□ -2.13
LCE4AQ5TA78 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC1.72□□□□□ -2.13
LCE4AQ5TA78 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC1.72□□□□□ -2.13
LCE4AQ5TA78 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
LCE4AQ5TA78 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
LCE4AQ5TA78 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
LCE4AQ5TA78 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC1.71□□□□□ -2.13
LCE4AQ5TA78 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.13
LCE4AQ5TA78 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.13
LCE4AQ5TA78 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
LCE4AQ5TA78 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
LCE4AQ5TA78 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
LCE4AQ5TA78 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC1.71□□□□□ -2.14
LCE4AQ5TA78 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC1.71□□□□□ -2.14
LCE4AQ5TA78 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
LCE4AQ5TA78 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
LCE4AQ5TA78 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
LCE4AQ5TA78 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC1.71□□□□□ -2.14
LCE4AQ5TA78 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
LCE4AQ5TA78 Y_RNA.74-201ENST00000362911 99 ntBASIC1.71□□□□□ -2.14
LCE4AQ5TA78 MIR130A-201ENST00000385274 89 ntBASIC1.71□□□□□ -2.14
LCE4AQ5TA78 MIR1257-201ENST00000408490 117 ntBASIC1.71□□□□□ -2.14
LCE4AQ5TA78 AL513328.1-201ENST00000446460 224 ntBASIC1.71□□□□□ -2.14
LCE4AQ5TA78 SNORA84-201ENST00000459229 133 ntBASIC1.71□□□□□ -2.14
LCE4AQ5TA78 RNU6-1206P-201ENST00000516339 103 ntBASIC1.71□□□□□ -2.14
LCE4AQ5TA78 RNA5SP43-201ENST00000516559 110 ntBASIC1.71□□□□□ -2.14
LCE4AQ5TA78 SNORA31.15-201ENST00000516771 132 ntBASIC1.71□□□□□ -2.14
LCE4AQ5TA78 MIR2116-201ENST00000517221 80 ntBASIC1.71□□□□□ -2.14
LCE4AQ5TA78 RNA5SP437-201ENST00000517249 129 ntBASIC1.71□□□□□ -2.14
LCE4AQ5TA78 MIR4429-201ENST00000580105 73 ntBASIC1.71□□□□□ -2.14
LCE4AQ5TA78 MIR548AG2-201ENST00000581228 64 ntBASIC1.71□□□□□ -2.14
LCE4AQ5TA78 ZNF195-203ENST00000343338 3145 ntAPPRIS ALT2 TSL 4 BASIC1.71□□□□□ -2.14
LCE4AQ5TA78 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
LCE4AQ5TA78 AL356274.2-201ENST00000624379 3752 ntBASIC1.71□□□□□ -2.14
LCE4AQ5TA78 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC1.71□□□□□ -2.14
LCE4AQ5TA78 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms