Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.83□□□□□ -1.8
USP46P62068 RPL39P25-201ENST00000449384 154 ntBASIC3.83□□□□□ -1.8
USP46P62068 RNU7-123P-201ENST00000515911 60 ntBASIC3.83□□□□□ -1.8
USP46P62068 RNU6-904P-201ENST00000516206 101 ntBASIC3.83□□□□□ -1.8
USP46P62068 SNORA18.7-201ENST00000516910 131 ntBASIC3.83□□□□□ -1.8
USP46P62068 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.83□□□□□ -1.8
USP46P62068 MALAT1.1-201ENST00000618249 95 ntBASIC3.83□□□□□ -1.8
USP46P62068 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.83□□□□□ -1.8
USP46P62068 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.83□□□□□ -1.8
USP46P62068 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
USP46P62068 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
USP46P62068 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.82□□□□□ -1.8
USP46P62068 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
USP46P62068 AC008264.2-201ENST00000610193 3731 ntBASIC3.82□□□□□ -1.8
USP46P62068 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
USP46P62068 SNORA63.1-201ENST00000362493 131 ntBASIC3.82□□□□□ -1.8
USP46P62068 RNU6-268P-201ENST00000364174 107 ntBASIC3.82□□□□□ -1.8
USP46P62068 RNU6-573P-201ENST00000383938 106 ntBASIC3.82□□□□□ -1.8
USP46P62068 MIR184-201ENST00000384962 84 ntBASIC3.82□□□□□ -1.8
USP46P62068 MIR23A-201ENST00000385245 73 ntBASIC3.82□□□□□ -1.8
USP46P62068 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.82□□□□□ -1.8
USP46P62068 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.82□□□□□ -1.8
USP46P62068 AL353689.1-201ENST00000438895 199 ntBASIC3.82□□□□□ -1.8
USP46P62068 RNU1-131P-201ENST00000458943 161 ntBASIC3.82□□□□□ -1.8
USP46P62068 RNU7-94P-201ENST00000459576 63 ntBASIC3.82□□□□□ -1.8
USP46P62068 SEM1P1-201ENST00000506694 209 ntBASIC3.82□□□□□ -1.8
USP46P62068 RN7SKP12-201ENST00000516275 143 ntBASIC3.82□□□□□ -1.8
USP46P62068 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
USP46P62068 MIR3163-201ENST00000581592 73 ntBASIC3.82□□□□□ -1.8
USP46P62068 AL356280.1-201ENST00000603614 379 ntBASIC3.82□□□□□ -1.8
USP46P62068 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.82□□□□□ -1.8
USP46P62068 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
USP46P62068 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
USP46P62068 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
USP46P62068 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
USP46P62068 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
USP46P62068 snoU2-30.1-201ENST00000365012 70 ntBASIC3.81□□□□□ -1.8
USP46P62068 Y_RNA.351-201ENST00000365436 96 ntBASIC3.81□□□□□ -1.8
USP46P62068 SNORA70.4-201ENST00000365509 134 ntBASIC3.81□□□□□ -1.8
USP46P62068 snoU13.22-201ENST00000459428 104 ntBASIC3.81□□□□□ -1.8
USP46P62068 RN7SL293P-201ENST00000481765 281 ntBASIC3.81□□□□□ -1.8
USP46P62068 MIR4305-201ENST00000583252 102 ntBASIC3.81□□□□□ -1.8
USP46P62068 DLEU2_5.2-201ENST00000610606 84 ntBASIC3.81□□□□□ -1.8
USP46P62068 RNVU1-4-201ENST00000612985 164 ntBASIC3.81□□□□□ -1.8
USP46P62068 AC012314.7-201ENST00000619693 93 ntBASIC3.81□□□□□ -1.8
USP46P62068 U6.105-201ENST00000637379 88 ntBASIC3.81□□□□□ -1.8
USP46P62068 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
USP46P62068 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
USP46P62068 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.8□□□□□ -1.8
USP46P62068 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
USP46P62068 Z83843.1-201ENST00000604070 3685 ntBASIC3.8□□□□□ -1.8
USP46P62068 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
USP46P62068 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
USP46P62068 Y_RNA.440-201ENST00000384120 114 ntBASIC3.8□□□□□ -1.8
USP46P62068 MIR490-201ENST00000384865 128 ntBASIC3.8□□□□□ -1.8
USP46P62068 MIR7-3-201ENST00000384898 110 ntBASIC3.8□□□□□ -1.8
USP46P62068 MIR183-201ENST00000384958 110 ntBASIC3.8□□□□□ -1.8
USP46P62068 MIR592-201ENST00000384959 97 ntBASIC3.8□□□□□ -1.8
USP46P62068 CYCSP4-201ENST00000429682 331 ntBASIC3.8□□□□□ -1.8
USP46P62068 AC107083.1-201ENST00000439643 279 ntBASIC3.8□□□□□ -1.8
USP46P62068 AC009238.1-201ENST00000442165 424 ntBASIC3.8□□□□□ -1.8
USP46P62068 AC009237.6-201ENST00000446969 424 ntBASIC3.8□□□□□ -1.8
USP46P62068 AC110768.1-201ENST00000509222 400 ntBASIC3.8□□□□□ -1.8
USP46P62068 RNU6-158P-201ENST00000517104 100 ntBASIC3.8□□□□□ -1.8
USP46P62068 U3.45-201ENST00000607547 219 ntBASIC3.8□□□□□ -1.8
USP46P62068 AL353149.1-201ENST00000610667 244 ntBASIC3.8□□□□□ -1.8
USP46P62068 AC015726.2-201ENST00000620112 122 ntBASIC3.8□□□□□ -1.8
USP46P62068 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
USP46P62068 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
USP46P62068 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
USP46P62068 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
USP46P62068 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.8□□□□□ -1.8
USP46P62068 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
USP46P62068 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
USP46P62068 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.79□□□□□ -1.8
USP46P62068 MIR342-201ENST00000362212 99 ntBASIC3.79□□□□□ -1.8
USP46P62068 Y_RNA.107-201ENST00000363190 121 ntBASIC3.79□□□□□ -1.8
USP46P62068 RNU6-1134P-201ENST00000365156 101 ntBASIC3.79□□□□□ -1.8
USP46P62068 MIR218-2-201ENST00000385006 110 ntBASIC3.79□□□□□ -1.8
USP46P62068 MIR450A2-201ENST00000385022 100 ntBASIC3.79□□□□□ -1.8
USP46P62068 MIR561-201ENST00000385216 97 ntBASIC3.79□□□□□ -1.8
USP46P62068 ARF4P2-201ENST00000430209 526 ntBASIC3.79□□□□□ -1.8
USP46P62068 ATP5J2P3-201ENST00000451550 258 ntBASIC3.79□□□□□ -1.8
USP46P62068 TRBV12-1-201ENST00000479785 344 ntBASIC3.79□□□□□ -1.8
USP46P62068 AL163195.1-201ENST00000496941 348 ntBASIC3.79□□□□□ -1.8
USP46P62068 AP003484.1-201ENST00000530974 250 ntBASIC3.79□□□□□ -1.8
USP46P62068 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.79□□□□□ -1.8
USP46P62068 AC019176.2-201ENST00000611579 315 ntBASIC3.79□□□□□ -1.8
USP46P62068 AL162726.3-218ENST00000636401 95 ntBASIC3.79□□□□□ -1.8
USP46P62068 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.79□□□□□ -1.8
USP46P62068 AL353746.1-201ENST00000566293 6881 ntBASIC3.79□□□□□ -1.8
USP46P62068 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
USP46P62068 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
USP46P62068 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.78□□□□□ -1.8
USP46P62068 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.78□□□□□ -1.8
USP46P62068 MIR302B-201ENST00000362188 73 ntBASIC3.78□□□□□ -1.8
USP46P62068 RNU4-16P-201ENST00000364737 141 ntBASIC3.78□□□□□ -1.8
USP46P62068 SNX2P2-201ENST00000424553 323 ntBASIC3.78□□□□□ -1.8
USP46P62068 PGBD4P5-201ENST00000445958 426 ntBASIC3.78□□□□□ -1.8
USP46P62068 SNORD105B-201ENST00000458770 79 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms