Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 RPL23AP83-201ENST00000434984 473 ntBASIC3.4□□□□□ -1.87
EPHA4P54764 AC024995.1-201ENST00000523014 93 ntBASIC3.4□□□□□ -1.87
EPHA4P54764 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.4□□□□□ -1.87
EPHA4P54764 uc_338.28-201ENST00000612082 187 ntBASIC3.4□□□□□ -1.87
EPHA4P54764 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
EPHA4P54764 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
EPHA4P54764 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
EPHA4P54764 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
EPHA4P54764 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
EPHA4P54764 RNU4-35P-201ENST00000362588 141 ntBASIC3.39□□□□□ -1.87
EPHA4P54764 Y_RNA.281-201ENST00000364774 94 ntBASIC3.39□□□□□ -1.87
EPHA4P54764 RNU6-160P-201ENST00000384591 107 ntBASIC3.39□□□□□ -1.87
EPHA4P54764 RNVU1-14-201ENST00000384770 164 ntBASIC3.39□□□□□ -1.87
EPHA4P54764 FTH1P12-201ENST00000432137 551 ntBASIC3.39□□□□□ -1.87
EPHA4P54764 RNU1-131P-201ENST00000458943 161 ntBASIC3.39□□□□□ -1.87
EPHA4P54764 COX6CP6-201ENST00000490840 228 ntBASIC3.39□□□□□ -1.87
EPHA4P54764 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.39□□□□□ -1.87
EPHA4P54764 RNU2-27P-201ENST00000516185 142 ntBASIC3.39□□□□□ -1.87
EPHA4P54764 AC007536.1-201ENST00000533382 349 ntBASIC3.39□□□□□ -1.87
EPHA4P54764 AC007012.1-201ENST00000567192 175 ntBASIC3.39□□□□□ -1.87
EPHA4P54764 MIR3186-201ENST00000577404 85 ntBASIC3.39□□□□□ -1.87
EPHA4P54764 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.39□□□□□ -1.87
EPHA4P54764 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
EPHA4P54764 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.38□□□□□ -1.87
EPHA4P54764 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.38□□□□□ -1.87
EPHA4P54764 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.38□□□□□ -1.87
EPHA4P54764 SNORD14E-201ENST00000364009 85 ntBASIC3.38□□□□□ -1.87
EPHA4P54764 SNORD21-201ENST00000383953 95 ntBASIC3.38□□□□□ -1.87
EPHA4P54764 RNU6-442P-201ENST00000383968 104 ntBASIC3.38□□□□□ -1.87
EPHA4P54764 Y_RNA.410-201ENST00000383992 113 ntBASIC3.38□□□□□ -1.87
EPHA4P54764 SNORD17-201ENST00000390930 237 ntBASIC3.38□□□□□ -1.87
EPHA4P54764 SNORD77.3-201ENST00000391113 65 ntBASIC3.38□□□□□ -1.87
EPHA4P54764 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.38□□□□□ -1.87
EPHA4P54764 Y_RNA.677-201ENST00000516401 85 ntBASIC3.38□□□□□ -1.87
EPHA4P54764 RNU7-70P-201ENST00000516941 66 ntBASIC3.38□□□□□ -1.87
EPHA4P54764 IGKV1-22-201ENST00000524313 326 ntBASIC3.38□□□□□ -1.87
EPHA4P54764 MIR5197-201ENST00000583721 112 ntBASIC3.38□□□□□ -1.87
EPHA4P54764 AC134878.1-201ENST00000619901 243 ntBASIC3.38□□□□□ -1.87
EPHA4P54764 U4.6-201ENST00000621618 127 ntBASIC3.38□□□□□ -1.87
EPHA4P54764 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
EPHA4P54764 AL021368.2-201ENST00000606125 5352 ntBASIC3.38□□□□□ -1.87
EPHA4P54764 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
EPHA4P54764 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
EPHA4P54764 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
EPHA4P54764 RNU6-1107P-201ENST00000364817 104 ntBASIC3.37□□□□□ -1.87
EPHA4P54764 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC3.37□□□□□ -1.87
EPHA4P54764 AC025518.1-201ENST00000479856 347 ntBASIC3.37□□□□□ -1.87
EPHA4P54764 AC091544.4-201ENST00000555268 342 ntBASIC3.37□□□□□ -1.87
EPHA4P54764 MIR4738-201ENST00000579134 87 ntBASIC3.37□□□□□ -1.87
EPHA4P54764 AC106754.2-201ENST00000623006 233 ntBASIC3.37□□□□□ -1.87
EPHA4P54764 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
EPHA4P54764 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
EPHA4P54764 RNU6-1084P-201ENST00000362498 107 ntBASIC3.36□□□□□ -1.87
EPHA4P54764 SNORA1B-201ENST00000362535 133 ntBASIC3.36□□□□□ -1.87
EPHA4P54764 SNORD68-201ENST00000363214 84 ntBASIC3.36□□□□□ -1.87
EPHA4P54764 RNA5SP42-201ENST00000364278 115 ntBASIC3.36□□□□□ -1.87
EPHA4P54764 MIR522-201ENST00000385071 87 ntBASIC3.36□□□□□ -1.87
EPHA4P54764 SNORD12C-201ENST00000386307 89 ntBASIC3.36□□□□□ -1.87
EPHA4P54764 MIR759-201ENST00000390224 91 ntBASIC3.36□□□□□ -1.87
EPHA4P54764 AC003685.2-201ENST00000422795 395 ntBASIC3.36□□□□□ -1.87
EPHA4P54764 CST2P1-201ENST00000425770 87 ntBASIC3.36□□□□□ -1.87
EPHA4P54764 CALM2P4-201ENST00000430810 426 ntBASIC3.36□□□□□ -1.87
EPHA4P54764 MIR5195-201ENST00000583555 115 ntBASIC3.36□□□□□ -1.87
EPHA4P54764 AL161756.2-201ENST00000604597 246 ntBASIC3.36□□□□□ -1.87
EPHA4P54764 MIR4679-1-201ENST00000637619 75 ntBASIC3.36□□□□□ -1.87
EPHA4P54764 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
EPHA4P54764 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
EPHA4P54764 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
EPHA4P54764 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
EPHA4P54764 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
EPHA4P54764 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
EPHA4P54764 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.36□□□□□ -1.87
EPHA4P54764 AC245060.5-201ENST00000610778 3293 ntBASIC3.35□□□□□ -1.87
EPHA4P54764 SNORA25B-201ENST00000365507 128 ntBASIC3.35□□□□□ -1.87
EPHA4P54764 Y_RNA.366-201ENST00000365540 102 ntBASIC3.35□□□□□ -1.87
EPHA4P54764 SNORA9-201ENST00000384215 133 ntBASIC3.35□□□□□ -1.87
EPHA4P54764 MIR548A2-201ENST00000384956 97 ntBASIC3.35□□□□□ -1.87
EPHA4P54764 MIR518F-201ENST00000384973 87 ntBASIC3.35□□□□□ -1.87
EPHA4P54764 RNU6-220P-201ENST00000390919 107 ntBASIC3.35□□□□□ -1.87
EPHA4P54764 MIR548O-201ENST00000408583 114 ntBASIC3.35□□□□□ -1.87
EPHA4P54764 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.35□□□□□ -1.87
EPHA4P54764 AL449363.1-201ENST00000617815 186 ntBASIC3.35□□□□□ -1.87
EPHA4P54764 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
EPHA4P54764 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
EPHA4P54764 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
EPHA4P54764 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.35□□□□□ -1.87
EPHA4P54764 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
EPHA4P54764 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
EPHA4P54764 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
EPHA4P54764 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
EPHA4P54764 Y_RNA.49-201ENST00000362714 112 ntBASIC3.34□□□□□ -1.87
EPHA4P54764 snoU2-30.1-201ENST00000365012 70 ntBASIC3.34□□□□□ -1.87
EPHA4P54764 RNU6-1189P-201ENST00000383958 107 ntBASIC3.34□□□□□ -1.87
EPHA4P54764 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
EPHA4P54764 MIR1302-5-201ENST00000408164 150 ntBASIC3.34□□□□□ -1.87
EPHA4P54764 SCARNA15-202ENST00000516881 127 ntBASIC3.34□□□□□ -1.87
EPHA4P54764 SNORA70.24-201ENST00000517233 118 ntBASIC3.34□□□□□ -1.87
EPHA4P54764 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.34□□□□□ -1.87
EPHA4P54764 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.34□□□□□ -1.87
EPHA4P54764 U6.108-201ENST00000637764 58 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 178.4 ms