Protein–RNA interactions for Protein: P23469

PTPRE, Receptor-type tyrosine-protein phosphatase epsilon, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPREP23469 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PTPREP23469 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
PTPREP23469 Y_RNA.191-201ENST00000363972 113 ntBASIC4.26□□□□□ -1.73
PTPREP23469 RNU6-442P-201ENST00000383968 104 ntBASIC4.26□□□□□ -1.73
PTPREP23469 RNU11-5P-201ENST00000391216 129 ntBASIC4.26□□□□□ -1.73
PTPREP23469 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC4.26□□□□□ -1.73
PTPREP23469 AL512326.2-201ENST00000426359 151 ntBASIC4.26□□□□□ -1.73
PTPREP23469 CYCSP4-201ENST00000429682 331 ntBASIC4.26□□□□□ -1.73
PTPREP23469 RN7SKP83-201ENST00000516512 178 ntBASIC4.26□□□□□ -1.73
PTPREP23469 RNU6-341P-201ENST00000516973 96 ntBASIC4.26□□□□□ -1.73
PTPREP23469 RNU7-128P-201ENST00000517247 62 ntBASIC4.26□□□□□ -1.73
PTPREP23469 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC4.26□□□□□ -1.73
PTPREP23469 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.26□□□□□ -1.73
PTPREP23469 AP003484.1-201ENST00000530974 250 ntBASIC4.26□□□□□ -1.73
PTPREP23469 AC002076.2-201ENST00000617362 122 ntBASIC4.26□□□□□ -1.73
PTPREP23469 MIR548BB-201ENST00000626714 66 ntBASIC4.26□□□□□ -1.73
PTPREP23469 MIR6079-201ENST00000635807 62 ntBASIC4.26□□□□□ -1.73
PTPREP23469 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
PTPREP23469 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
PTPREP23469 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PTPREP23469 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.26□□□□□ -1.73
PTPREP23469 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.25□□□□□ -1.73
PTPREP23469 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PTPREP23469 RNA5SP50-201ENST00000363731 107 ntBASIC4.25□□□□□ -1.73
PTPREP23469 RNU6-268P-201ENST00000364174 107 ntBASIC4.25□□□□□ -1.73
PTPREP23469 RNA5SP424-201ENST00000390988 115 ntBASIC4.25□□□□□ -1.73
PTPREP23469 RN7SKP200-201ENST00000410564 320 ntBASIC4.25□□□□□ -1.73
PTPREP23469 Y_RNA.607-201ENST00000410597 98 ntBASIC4.25□□□□□ -1.73
PTPREP23469 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PTPREP23469 SNORA4.4-201ENST00000515921 135 ntBASIC4.25□□□□□ -1.73
PTPREP23469 IGHVII-40-1-201ENST00000517316 58 ntBASIC4.25□□□□□ -1.73
PTPREP23469 AL358944.1-201ENST00000528537 144 ntBASIC4.25□□□□□ -1.73
PTPREP23469 AC004812.1-201ENST00000540773 146 ntBASIC4.25□□□□□ -1.73
PTPREP23469 MIR4765-201ENST00000585007 77 ntBASIC4.25□□□□□ -1.73
PTPREP23469 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.25□□□□□ -1.73
PTPREP23469 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.25□□□□□ -1.73
PTPREP23469 MIR3651-201ENST00000630427 90 ntBASIC4.25□□□□□ -1.73
PTPREP23469 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC4.25□□□□□ -1.73
PTPREP23469 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.25□□□□□ -1.73
PTPREP23469 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
PTPREP23469 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.25□□□□□ -1.73
PTPREP23469 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.24□□□□□ -1.73
PTPREP23469 SNORD9-201ENST00000362566 104 ntBASIC4.24□□□□□ -1.73
PTPREP23469 SNORD14E-201ENST00000364009 85 ntBASIC4.24□□□□□ -1.73
PTPREP23469 Y_RNA.377-201ENST00000365644 108 ntBASIC4.24□□□□□ -1.73
PTPREP23469 RNA5SP144-201ENST00000410846 116 ntBASIC4.24□□□□□ -1.73
PTPREP23469 Z92545.1-201ENST00000411782 234 ntBASIC4.24□□□□□ -1.73
PTPREP23469 SNX2P2-201ENST00000424553 323 ntBASIC4.24□□□□□ -1.73
PTPREP23469 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.24□□□□□ -1.73
PTPREP23469 BX510359.1-201ENST00000456973 237 ntBASIC4.24□□□□□ -1.73
PTPREP23469 MIR2114-201ENST00000516645 80 ntBASIC4.24□□□□□ -1.73
PTPREP23469 RNU6-856P-201ENST00000516959 98 ntBASIC4.24□□□□□ -1.73
PTPREP23469 AC078899.2-201ENST00000595282 212 ntBASIC4.24□□□□□ -1.73
PTPREP23469 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.24□□□□□ -1.73
PTPREP23469 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
PTPREP23469 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PTPREP23469 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PTPREP23469 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PTPREP23469 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PTPREP23469 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PTPREP23469 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
PTPREP23469 MIR342-201ENST00000362212 99 ntBASIC4.23□□□□□ -1.73
PTPREP23469 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PTPREP23469 RNU2-40P-201ENST00000410833 196 ntBASIC4.23□□□□□ -1.73
PTPREP23469 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC4.23□□□□□ -1.73
PTPREP23469 AC244505.4-201ENST00000434905 287 ntBASIC4.23□□□□□ -1.73
PTPREP23469 SSXP5-201ENST00000443473 287 ntBASIC4.23□□□□□ -1.73
PTPREP23469 RPL23AP63-201ENST00000498752 471 ntBASIC4.23□□□□□ -1.73
PTPREP23469 RNU6-586P-201ENST00000517265 104 ntBASIC4.23□□□□□ -1.73
PTPREP23469 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC4.23□□□□□ -1.73
PTPREP23469 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC4.23□□□□□ -1.73
PTPREP23469 AF117829.1-206ENST00000621883 3802 ntBASIC4.23□□□□□ -1.73
PTPREP23469 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PTPREP23469 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PTPREP23469 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PTPREP23469 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.23□□□□□ -1.73
PTPREP23469 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
PTPREP23469 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
PTPREP23469 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.23□□□□□ -1.73
PTPREP23469 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PTPREP23469 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PTPREP23469 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
PTPREP23469 Y_RNA.94-201ENST00000363068 106 ntBASIC4.22□□□□□ -1.73
PTPREP23469 SNORD116-10-201ENST00000363791 102 ntBASIC4.22□□□□□ -1.73
PTPREP23469 Y_RNA.316-201ENST00000365118 111 ntBASIC4.22□□□□□ -1.73
PTPREP23469 NDUFB4P4-201ENST00000404822 243 ntBASIC4.22□□□□□ -1.73
PTPREP23469 AL022718.1-201ENST00000412004 84 ntBASIC4.22□□□□□ -1.73
PTPREP23469 AC060773.1-201ENST00000421698 310 ntBASIC4.22□□□□□ -1.73
PTPREP23469 SNRPGP14-201ENST00000435400 219 ntBASIC4.22□□□□□ -1.73
PTPREP23469 HMGN2P16-201ENST00000456802 261 ntBASIC4.22□□□□□ -1.73
PTPREP23469 SNRPGP3-201ENST00000469405 227 ntBASIC4.22□□□□□ -1.73
PTPREP23469 RN7SL601P-201ENST00000471221 293 ntBASIC4.22□□□□□ -1.73
PTPREP23469 AC005000.2-201ENST00000605468 310 ntBASIC4.22□□□□□ -1.73
PTPREP23469 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PTPREP23469 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PTPREP23469 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PTPREP23469 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.21□□□□□ -1.74
PTPREP23469 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PTPREP23469 RNU6-509P-201ENST00000363519 107 ntBASIC4.21□□□□□ -1.74
PTPREP23469 RNU6-283P-201ENST00000364788 107 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms