Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AL356379.1-201ENST00000414105 126 ntBASIC1.8□□□□□ -2.12
PRKNO60260 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.8□□□□□ -2.12
PRKNO60260 ATP5J2P3-201ENST00000451550 258 ntBASIC1.8□□□□□ -2.12
PRKNO60260 RPL39P38-201ENST00000467018 153 ntBASIC1.8□□□□□ -2.12
PRKNO60260 AC055731.1-201ENST00000474387 401 ntBASIC1.8□□□□□ -2.12
PRKNO60260 RPS27P22-201ENST00000478056 241 ntBASIC1.8□□□□□ -2.12
PRKNO60260 AC108210.2-201ENST00000503681 201 ntBASIC1.8□□□□□ -2.12
PRKNO60260 SERF1AP1-201ENST00000514575 187 ntBASIC1.8□□□□□ -2.12
PRKNO60260 RNU2-19P-201ENST00000517288 84 ntBASIC1.8□□□□□ -2.12
PRKNO60260 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.8□□□□□ -2.12
PRKNO60260 DEFB122-202ENST00000569013 197 ntBASIC1.8□□□□□ -2.12
PRKNO60260 AC012433.1-201ENST00000588916 398 ntBASIC1.8□□□□□ -2.12
PRKNO60260 AC005828.6-201ENST00000606610 232 ntBASIC1.8□□□□□ -2.12
PRKNO60260 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.8□□□□□ -2.12
PRKNO60260 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.79□□□□□ -2.12
PRKNO60260 MIR335-201ENST00000362173 94 ntBASIC1.79□□□□□ -2.12
PRKNO60260 SNORA25.1-201ENST00000362326 128 ntBASIC1.79□□□□□ -2.12
PRKNO60260 SNORA27.1-201ENST00000362604 124 ntBASIC1.79□□□□□ -2.12
PRKNO60260 snoU2-30.2-201ENST00000362805 70 ntBASIC1.79□□□□□ -2.12
PRKNO60260 SNORA16B-201ENST00000364674 135 ntBASIC1.79□□□□□ -2.12
PRKNO60260 RNU6-326P-201ENST00000365480 107 ntBASIC1.79□□□□□ -2.12
PRKNO60260 RNU6-514P-201ENST00000384208 107 ntBASIC1.79□□□□□ -2.12
PRKNO60260 Y_RNA.489-201ENST00000384410 101 ntBASIC1.79□□□□□ -2.12
PRKNO60260 MIR518A2-201ENST00000384966 87 ntBASIC1.79□□□□□ -2.12
PRKNO60260 MIR764-201ENST00000390811 85 ntBASIC1.79□□□□□ -2.12
PRKNO60260 U8.13-201ENST00000390842 128 ntBASIC1.79□□□□□ -2.12
PRKNO60260 RNU11-3P-201ENST00000391111 133 ntBASIC1.79□□□□□ -2.12
PRKNO60260 HMGN2P39-201ENST00000398005 273 ntBASIC1.79□□□□□ -2.12
PRKNO60260 MIR873-201ENST00000401120 77 ntBASIC1.79□□□□□ -2.12
PRKNO60260 AL445685.2-201ENST00000422551 342 ntBASIC1.79□□□□□ -2.12
PRKNO60260 AL591806.2-201ENST00000433122 173 ntBASIC1.79□□□□□ -2.12
PRKNO60260 MTCO1P5-201ENST00000433573 344 ntBASIC1.79□□□□□ -2.12
PRKNO60260 AL353689.1-201ENST00000438895 199 ntBASIC1.79□□□□□ -2.12
PRKNO60260 SUMO1P2-201ENST00000452524 304 ntBASIC1.79□□□□□ -2.12
PRKNO60260 AC010409.1-201ENST00000487382 476 ntBASIC1.79□□□□□ -2.12
PRKNO60260 AC090255.1-201ENST00000495779 349 ntBASIC1.79□□□□□ -2.12
PRKNO60260 RNU6-1146P-201ENST00000516282 102 ntBASIC1.79□□□□□ -2.12
PRKNO60260 RNU1-40P-201ENST00000516816 164 ntBASIC1.79□□□□□ -2.12
PRKNO60260 RNU1-97P-201ENST00000516872 164 ntBASIC1.79□□□□□ -2.12
PRKNO60260 RNU6-794P-201ENST00000517261 64 ntBASIC1.79□□□□□ -2.12
PRKNO60260 SUMO2P18-201ENST00000518873 252 ntBASIC1.79□□□□□ -2.12
PRKNO60260 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.79□□□□□ -2.12
PRKNO60260 RPL21P9-201ENST00000556149 474 ntBASIC1.79□□□□□ -2.12
PRKNO60260 MIR3128-201ENST00000581957 66 ntBASIC1.79□□□□□ -2.12
PRKNO60260 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.79□□□□□ -2.12
PRKNO60260 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.79□□□□□ -2.12
PRKNO60260 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
PRKNO60260 ZNF355P-201ENST00000427301 3216 ntBASIC1.79□□□□□ -2.12
PRKNO60260 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
PRKNO60260 RNU6-271P-201ENST00000363858 105 ntBASIC1.78□□□□□ -2.12
PRKNO60260 Y_RNA.287-201ENST00000364853 94 ntBASIC1.78□□□□□ -2.12
PRKNO60260 Y_RNA.477-201ENST00000384352 108 ntBASIC1.78□□□□□ -2.12
PRKNO60260 MIR17-201ENST00000385012 84 ntBASIC1.78□□□□□ -2.12
PRKNO60260 HMGN2P38-201ENST00000423806 265 ntBASIC1.78□□□□□ -2.12
PRKNO60260 RPL23AP63-201ENST00000498752 471 ntBASIC1.78□□□□□ -2.12
PRKNO60260 RNA5SP20-201ENST00000515976 84 ntBASIC1.78□□□□□ -2.12
PRKNO60260 SNORA70.12-201ENST00000516084 153 ntBASIC1.78□□□□□ -2.12
PRKNO60260 RNU6-1023P-201ENST00000516137 106 ntBASIC1.78□□□□□ -2.12
PRKNO60260 RNU6-388P-201ENST00000517012 105 ntBASIC1.78□□□□□ -2.12
PRKNO60260 RNU6-389P-201ENST00000517048 105 ntBASIC1.78□□□□□ -2.12
PRKNO60260 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.78□□□□□ -2.12
PRKNO60260 MIR338-201ENST00000636369 67 ntBASIC1.78□□□□□ -2.12
PRKNO60260 AL359851.1-201ENST00000569460 4997 ntBASIC1.78□□□□□ -2.12
PRKNO60260 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.78□□□□□ -2.12
PRKNO60260 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.78□□□□□ -2.13
PRKNO60260 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.13
PRKNO60260 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.13
PRKNO60260 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
PRKNO60260 RNU6-862P-201ENST00000362804 105 ntBASIC1.77□□□□□ -2.13
PRKNO60260 Y_RNA.136-201ENST00000363444 102 ntBASIC1.77□□□□□ -2.13
PRKNO60260 RNA5SP138-201ENST00000365098 114 ntBASIC1.77□□□□□ -2.13
PRKNO60260 Y_RNA.361-201ENST00000365515 120 ntBASIC1.77□□□□□ -2.13
PRKNO60260 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.77□□□□□ -2.13
PRKNO60260 MIR1283-2-201ENST00000408621 87 ntBASIC1.77□□□□□ -2.13
PRKNO60260 MIR548H3-201ENST00000408771 118 ntBASIC1.77□□□□□ -2.13
PRKNO60260 RNU2-40P-201ENST00000410833 196 ntBASIC1.77□□□□□ -2.13
PRKNO60260 RNU2-61P-201ENST00000411069 191 ntBASIC1.77□□□□□ -2.13
PRKNO60260 AC024067.1-201ENST00000426199 223 ntBASIC1.77□□□□□ -2.13
PRKNO60260 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.77□□□□□ -2.13
PRKNO60260 MTND4LP30-201ENST00000454092 297 ntBASIC1.77□□□□□ -2.13
PRKNO60260 RNA5SP233-201ENST00000459153 113 ntBASIC1.77□□□□□ -2.13
PRKNO60260 AC091959.1-201ENST00000495857 238 ntBASIC1.77□□□□□ -2.13
PRKNO60260 Y_RNA.673-201ENST00000516306 88 ntBASIC1.77□□□□□ -2.13
PRKNO60260 MIR514B-201ENST00000516774 80 ntBASIC1.77□□□□□ -2.13
PRKNO60260 AL137100.2-201ENST00000555786 315 ntBASIC1.77□□□□□ -2.13
PRKNO60260 AC015712.3-201ENST00000559380 164 ntBASIC1.77□□□□□ -2.13
PRKNO60260 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.77□□□□□ -2.13
PRKNO60260 MIR3668-201ENST00000582138 75 ntBASIC1.77□□□□□ -2.13
PRKNO60260 MIR4438-201ENST00000585271 93 ntBASIC1.77□□□□□ -2.13
PRKNO60260 AC005357.1-201ENST00000588399 301 ntBASIC1.77□□□□□ -2.13
PRKNO60260 MIR6845-201ENST00000613182 61 ntBASIC1.77□□□□□ -2.13
PRKNO60260 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
PRKNO60260 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.76□□□□□ -2.13
PRKNO60260 Y_RNA.54-201ENST00000362766 105 ntBASIC1.76□□□□□ -2.13
PRKNO60260 SNORA33-201ENST00000363664 130 ntBASIC1.76□□□□□ -2.13
PRKNO60260 Y_RNA.416-201ENST00000384014 113 ntBASIC1.76□□□□□ -2.13
PRKNO60260 SNORA40.19-201ENST00000390846 128 ntBASIC1.76□□□□□ -2.13
PRKNO60260 RNU6-907P-201ENST00000390924 102 ntBASIC1.76□□□□□ -2.13
PRKNO60260 RNA5SP467-201ENST00000391274 118 ntBASIC1.76□□□□□ -2.13
PRKNO60260 RNU6-855P-201ENST00000410395 104 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms