Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PCDHA4Q9UN74 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PCDHA4Q9UN74 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.23□□□□□ -1.89
PCDHA4Q9UN74 AC008264.2-201ENST00000610193 3731 ntBASIC3.23□□□□□ -1.89
PCDHA4Q9UN74 RNU1-22P-201ENST00000363334 158 ntBASIC3.23□□□□□ -1.89
PCDHA4Q9UN74 Y_RNA.251-201ENST00000364551 99 ntBASIC3.23□□□□□ -1.89
PCDHA4Q9UN74 RNU6-597P-201ENST00000365620 102 ntBASIC3.23□□□□□ -1.89
PCDHA4Q9UN74 SNORA79-201ENST00000408376 140 ntBASIC3.23□□□□□ -1.89
PCDHA4Q9UN74 AC244505.4-201ENST00000434905 287 ntBASIC3.23□□□□□ -1.89
PCDHA4Q9UN74 SSXP5-201ENST00000443473 287 ntBASIC3.23□□□□□ -1.89
PCDHA4Q9UN74 AL357134.1-201ENST00000445848 426 ntBASIC3.23□□□□□ -1.89
PCDHA4Q9UN74 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.23□□□□□ -1.89
PCDHA4Q9UN74 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.23□□□□□ -1.89
PCDHA4Q9UN74 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
PCDHA4Q9UN74 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.23□□□□□ -1.89
PCDHA4Q9UN74 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC3.23□□□□□ -1.89
PCDHA4Q9UN74 MIR378D2-201ENST00000580636 98 ntBASIC3.23□□□□□ -1.89
PCDHA4Q9UN74 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
PCDHA4Q9UN74 RNY1P11-201ENST00000363759 113 ntBASIC3.22□□□□□ -1.89
PCDHA4Q9UN74 RNU6-1180P-201ENST00000364935 107 ntBASIC3.22□□□□□ -1.89
PCDHA4Q9UN74 RNU6-80P-201ENST00000384195 107 ntBASIC3.22□□□□□ -1.89
PCDHA4Q9UN74 RNU2-55P-201ENST00000411146 174 ntBASIC3.22□□□□□ -1.89
PCDHA4Q9UN74 AC025750.2-201ENST00000442609 450 ntBASIC3.22□□□□□ -1.89
PCDHA4Q9UN74 AC093259.1-201ENST00000509755 300 ntBASIC3.22□□□□□ -1.89
PCDHA4Q9UN74 AC091826.1-201ENST00000514065 313 ntBASIC3.22□□□□□ -1.89
PCDHA4Q9UN74 AC097462.1-201ENST00000514125 324 ntBASIC3.22□□□□□ -1.89
PCDHA4Q9UN74 AL929325.1-201ENST00000603096 117 ntBASIC3.22□□□□□ -1.89
PCDHA4Q9UN74 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
PCDHA4Q9UN74 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PCDHA4Q9UN74 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.21□□□□□ -1.89
PCDHA4Q9UN74 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PCDHA4Q9UN74 RNU1-23P-201ENST00000363361 144 ntBASIC3.21□□□□□ -1.9
PCDHA4Q9UN74 Y_RNA.273-201ENST00000364703 102 ntBASIC3.21□□□□□ -1.9
PCDHA4Q9UN74 Y_RNA.332-201ENST00000365271 113 ntBASIC3.21□□□□□ -1.9
PCDHA4Q9UN74 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.21□□□□□ -1.9
PCDHA4Q9UN74 RNU6-136P-201ENST00000384663 107 ntBASIC3.21□□□□□ -1.9
PCDHA4Q9UN74 SNORA48.8-201ENST00000391324 134 ntBASIC3.21□□□□□ -1.9
PCDHA4Q9UN74 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.21□□□□□ -1.9
PCDHA4Q9UN74 AC107083.1-201ENST00000439643 279 ntBASIC3.21□□□□□ -1.9
PCDHA4Q9UN74 CYP2C59P-201ENST00000457790 269 ntBASIC3.21□□□□□ -1.9
PCDHA4Q9UN74 AC003982.1-202ENST00000469928 248 ntBASIC3.21□□□□□ -1.9
PCDHA4Q9UN74 RNU6-197P-201ENST00000516680 100 ntBASIC3.21□□□□□ -1.9
PCDHA4Q9UN74 AP001328.1-201ENST00000528550 176 ntBASIC3.21□□□□□ -1.9
PCDHA4Q9UN74 MIR4438-201ENST00000585271 93 ntBASIC3.21□□□□□ -1.9
PCDHA4Q9UN74 AL359881.1-201ENST00000602916 267 ntBASIC3.21□□□□□ -1.9
PCDHA4Q9UN74 AC120024.3-201ENST00000603167 156 ntBASIC3.21□□□□□ -1.9
PCDHA4Q9UN74 AC011603.4-201ENST00000611325 277 ntBASIC3.21□□□□□ -1.9
PCDHA4Q9UN74 AL137790.1-201ENST00000634283 177 ntBASIC3.21□□□□□ -1.9
PCDHA4Q9UN74 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
PCDHA4Q9UN74 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
PCDHA4Q9UN74 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PCDHA4Q9UN74 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
PCDHA4Q9UN74 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PCDHA4Q9UN74 RNU6-743P-201ENST00000364151 106 ntBASIC3.2□□□□□ -1.9
PCDHA4Q9UN74 Y_RNA.353-201ENST00000365440 108 ntBASIC3.2□□□□□ -1.9
PCDHA4Q9UN74 DYNLT3P1-201ENST00000378574 347 ntBASIC3.2□□□□□ -1.9
PCDHA4Q9UN74 RNU6-484P-201ENST00000384016 107 ntBASIC3.2□□□□□ -1.9
PCDHA4Q9UN74 AC123900.1-201ENST00000420390 96 ntBASIC3.2□□□□□ -1.9
PCDHA4Q9UN74 AC245102.2-201ENST00000448956 180 ntBASIC3.2□□□□□ -1.9
PCDHA4Q9UN74 AP001486.1-201ENST00000463339 476 ntBASIC3.2□□□□□ -1.9
PCDHA4Q9UN74 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.2□□□□□ -1.9
PCDHA4Q9UN74 SNORA48.11-201ENST00000517015 89 ntBASIC3.2□□□□□ -1.9
PCDHA4Q9UN74 RNU7-172P-201ENST00000517125 64 ntBASIC3.2□□□□□ -1.9
PCDHA4Q9UN74 AL160236.1-201ENST00000556317 195 ntBASIC3.2□□□□□ -1.9
PCDHA4Q9UN74 MIR3117-201ENST00000584034 78 ntBASIC3.2□□□□□ -1.9
PCDHA4Q9UN74 AL049861.1-201ENST00000603130 150 ntBASIC3.2□□□□□ -1.9
PCDHA4Q9UN74 AL356280.1-201ENST00000603614 379 ntBASIC3.2□□□□□ -1.9
PCDHA4Q9UN74 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PCDHA4Q9UN74 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
PCDHA4Q9UN74 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PCDHA4Q9UN74 MIR26A1-201ENST00000362205 77 ntBASIC3.19□□□□□ -1.9
PCDHA4Q9UN74 RNU6-1082P-201ENST00000364574 107 ntBASIC3.19□□□□□ -1.9
PCDHA4Q9UN74 Y_RNA.432-201ENST00000384087 111 ntBASIC3.19□□□□□ -1.9
PCDHA4Q9UN74 SNORD20-201ENST00000384550 80 ntBASIC3.19□□□□□ -1.9
PCDHA4Q9UN74 RNU2-48P-201ENST00000410694 191 ntBASIC3.19□□□□□ -1.9
PCDHA4Q9UN74 Z92545.1-201ENST00000411782 234 ntBASIC3.19□□□□□ -1.9
PCDHA4Q9UN74 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.19□□□□□ -1.9
PCDHA4Q9UN74 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.19□□□□□ -1.9
PCDHA4Q9UN74 RPS4XP11-201ENST00000446897 772 ntBASIC3.19□□□□□ -1.9
PCDHA4Q9UN74 RPS29P12-201ENST00000460178 152 ntBASIC3.19□□□□□ -1.9
PCDHA4Q9UN74 CKS1BP2-201ENST00000497342 240 ntBASIC3.19□□□□□ -1.9
PCDHA4Q9UN74 RNU4-57P-201ENST00000515980 135 ntBASIC3.19□□□□□ -1.9
PCDHA4Q9UN74 RNU2-56P-201ENST00000516826 190 ntBASIC3.19□□□□□ -1.9
PCDHA4Q9UN74 RNU6-856P-201ENST00000516959 98 ntBASIC3.19□□□□□ -1.9
PCDHA4Q9UN74 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.19□□□□□ -1.9
PCDHA4Q9UN74 ZNF861P-201ENST00000588126 639 ntBASIC3.19□□□□□ -1.9
PCDHA4Q9UN74 U2.20-201ENST00000613956 192 ntBASIC3.19□□□□□ -1.9
PCDHA4Q9UN74 MAPK10-266ENST00000641066 6555 ntBASIC3.18□□□□□ -1.9
PCDHA4Q9UN74 Y_RNA.203-201ENST00000364106 102 ntBASIC3.18□□□□□ -1.9
PCDHA4Q9UN74 RNU6-215P-201ENST00000365169 102 ntBASIC3.18□□□□□ -1.9
PCDHA4Q9UN74 MIR181B1-201ENST00000385240 110 ntBASIC3.18□□□□□ -1.9
PCDHA4Q9UN74 AC063976.3-201ENST00000426849 329 ntBASIC3.18□□□□□ -1.9
PCDHA4Q9UN74 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.18□□□□□ -1.9
PCDHA4Q9UN74 AC023141.11-201ENST00000508864 202 ntBASIC3.18□□□□□ -1.9
PCDHA4Q9UN74 RNU6-1299P-201ENST00000516316 100 ntBASIC3.18□□□□□ -1.9
PCDHA4Q9UN74 RNA5SP367-201ENST00000516557 118 ntBASIC3.18□□□□□ -1.9
PCDHA4Q9UN74 AC079600.2-201ENST00000550076 130 ntBASIC3.18□□□□□ -1.9
PCDHA4Q9UN74 MIR2681-201ENST00000581814 105 ntBASIC3.18□□□□□ -1.9
PCDHA4Q9UN74 MIR3605-201ENST00000583214 100 ntBASIC3.18□□□□□ -1.9
PCDHA4Q9UN74 U7.2-201ENST00000607576 63 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 183.8 ms