Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 MIR3162-201ENST00000581818 82 ntBASIC2.65□□□□□ -1.99
CDC42EP3Q9UKI2 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.65□□□□□ -1.99
CDC42EP3Q9UKI2 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CDC42EP3Q9UKI2 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.64□□□□□ -1.99
CDC42EP3Q9UKI2 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CDC42EP3Q9UKI2 RNU1-96P-201ENST00000364163 162 ntBASIC2.64□□□□□ -1.99
CDC42EP3Q9UKI2 RNU6-1117P-201ENST00000384525 104 ntBASIC2.64□□□□□ -1.99
CDC42EP3Q9UKI2 SNORA26.7-201ENST00000391288 122 ntBASIC2.64□□□□□ -1.99
CDC42EP3Q9UKI2 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.64□□□□□ -1.99
CDC42EP3Q9UKI2 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.64□□□□□ -1.99
CDC42EP3Q9UKI2 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.64□□□□□ -1.99
CDC42EP3Q9UKI2 SNORA4.4-201ENST00000515921 135 ntBASIC2.64□□□□□ -1.99
CDC42EP3Q9UKI2 RNU6-991P-201ENST00000516168 107 ntBASIC2.64□□□□□ -1.99
CDC42EP3Q9UKI2 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.64□□□□□ -1.99
CDC42EP3Q9UKI2 MIR548AI-201ENST00000579940 88 ntBASIC2.64□□□□□ -1.99
CDC42EP3Q9UKI2 MIR4438-201ENST00000585271 93 ntBASIC2.64□□□□□ -1.99
CDC42EP3Q9UKI2 AL355297.2-201ENST00000604792 129 ntBASIC2.64□□□□□ -1.99
CDC42EP3Q9UKI2 AL033523.1-201ENST00000605153 153 ntBASIC2.64□□□□□ -1.99
CDC42EP3Q9UKI2 U6.73-201ENST00000619194 103 ntBASIC2.64□□□□□ -1.99
CDC42EP3Q9UKI2 MIR3658-201ENST00000636291 56 ntBASIC2.64□□□□□ -1.99
CDC42EP3Q9UKI2 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
CDC42EP3Q9UKI2 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.64□□□□□ -1.99
CDC42EP3Q9UKI2 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CDC42EP3Q9UKI2 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CDC42EP3Q9UKI2 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.63□□□□□ -1.99
CDC42EP3Q9UKI2 RNU6-743P-201ENST00000364151 106 ntBASIC2.63□□□□□ -1.99
CDC42EP3Q9UKI2 SNORA71.1-201ENST00000364523 117 ntBASIC2.63□□□□□ -1.99
CDC42EP3Q9UKI2 RNU4-11P-201ENST00000365287 132 ntBASIC2.63□□□□□ -1.99
CDC42EP3Q9UKI2 RNU6-1081P-201ENST00000384537 107 ntBASIC2.63□□□□□ -1.99
CDC42EP3Q9UKI2 MIR181A2-201ENST00000384863 110 ntBASIC2.63□□□□□ -1.99
CDC42EP3Q9UKI2 MIR592-201ENST00000384959 97 ntBASIC2.63□□□□□ -1.99
CDC42EP3Q9UKI2 RNU6-257P-201ENST00000410238 98 ntBASIC2.63□□□□□ -1.99
CDC42EP3Q9UKI2 AC006461.1-201ENST00000412637 326 ntBASIC2.63□□□□□ -1.99
CDC42EP3Q9UKI2 AC060773.1-201ENST00000421698 310 ntBASIC2.63□□□□□ -1.99
CDC42EP3Q9UKI2 AC063976.3-201ENST00000426849 329 ntBASIC2.63□□□□□ -1.99
CDC42EP3Q9UKI2 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.63□□□□□ -1.99
CDC42EP3Q9UKI2 AC245102.2-201ENST00000448956 180 ntBASIC2.63□□□□□ -1.99
CDC42EP3Q9UKI2 AC091826.1-201ENST00000514065 313 ntBASIC2.63□□□□□ -1.99
CDC42EP3Q9UKI2 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.63□□□□□ -1.99
CDC42EP3Q9UKI2 ELOCP29-201ENST00000588193 334 ntBASIC2.63□□□□□ -1.99
CDC42EP3Q9UKI2 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.63□□□□□ -1.99
CDC42EP3Q9UKI2 MIR622-201ENST00000638396 96 ntBASIC2.63□□□□□ -1.99
CDC42EP3Q9UKI2 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CDC42EP3Q9UKI2 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.62□□□□□ -1.99
CDC42EP3Q9UKI2 SNORA7.4-201ENST00000384249 137 ntBASIC2.62□□□□□ -1.99
CDC42EP3Q9UKI2 AL512604.1-201ENST00000404812 257 ntBASIC2.62□□□□□ -1.99
CDC42EP3Q9UKI2 RNU2-55P-201ENST00000411146 174 ntBASIC2.62□□□□□ -1.99
CDC42EP3Q9UKI2 AC104332.2-201ENST00000429959 156 ntBASIC2.62□□□□□ -1.99
CDC42EP3Q9UKI2 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.62□□□□□ -1.99
CDC42EP3Q9UKI2 SNRPGP8-201ENST00000454064 226 ntBASIC2.62□□□□□ -1.99
CDC42EP3Q9UKI2 RNU7-197P-201ENST00000458836 62 ntBASIC2.62□□□□□ -1.99
CDC42EP3Q9UKI2 AC008885.1-201ENST00000514930 301 ntBASIC2.62□□□□□ -1.99
CDC42EP3Q9UKI2 RNA5SP356-201ENST00000515972 94 ntBASIC2.62□□□□□ -1.99
CDC42EP3Q9UKI2 RNU7-172P-201ENST00000517125 64 ntBASIC2.62□□□□□ -1.99
CDC42EP3Q9UKI2 NDUFA5P6-201ENST00000542110 379 ntBASIC2.62□□□□□ -1.99
CDC42EP3Q9UKI2 MIR3646-201ENST00000578301 84 ntBASIC2.62□□□□□ -1.99
CDC42EP3Q9UKI2 MIR3117-201ENST00000584034 78 ntBASIC2.62□□□□□ -1.99
CDC42EP3Q9UKI2 AC138915.1-201ENST00000565427 1685 ntBASIC2.62□□□□□ -1.99
CDC42EP3Q9UKI2 AL136360.1-201ENST00000503377 1900 ntBASIC2.62□□□□□ -1.99
CDC42EP3Q9UKI2 AC010332.2-201ENST00000613083 1904 ntBASIC2.62□□□□□ -1.99
CDC42EP3Q9UKI2 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
CDC42EP3Q9UKI2 RNU4-13P-201ENST00000364019 141 ntBASIC2.61□□□□□ -1.99
CDC42EP3Q9UKI2 RPL32P35-201ENST00000415214 394 ntBASIC2.61□□□□□ -1.99
CDC42EP3Q9UKI2 RPS4XP11-201ENST00000446897 772 ntBASIC2.61□□□□□ -1.99
CDC42EP3Q9UKI2 RN7SL499P-201ENST00000481141 276 ntBASIC2.61□□□□□ -1.99
CDC42EP3Q9UKI2 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.61□□□□□ -1.99
CDC42EP3Q9UKI2 RNA5SP217-201ENST00000515959 91 ntBASIC2.61□□□□□ -1.99
CDC42EP3Q9UKI2 RNU6-479P-201ENST00000516348 105 ntBASIC2.61□□□□□ -1.99
CDC42EP3Q9UKI2 RNU6-667P-201ENST00000517186 102 ntBASIC2.61□□□□□ -1.99
CDC42EP3Q9UKI2 AL160236.1-201ENST00000556317 195 ntBASIC2.61□□□□□ -1.99
CDC42EP3Q9UKI2 AL929325.1-201ENST00000603096 117 ntBASIC2.61□□□□□ -1.99
CDC42EP3Q9UKI2 AC091895.1-201ENST00000624494 256 ntBASIC2.61□□□□□ -1.99
CDC42EP3Q9UKI2 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.61□□□□□ -1.99
CDC42EP3Q9UKI2 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.6□□□□□ -1.99
CDC42EP3Q9UKI2 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CDC42EP3Q9UKI2 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
CDC42EP3Q9UKI2 SNORD45.3-201ENST00000363836 72 ntBASIC2.6□□□□□ -1.99
CDC42EP3Q9UKI2 RNU4-41P-201ENST00000364426 143 ntBASIC2.6□□□□□ -1.99
CDC42EP3Q9UKI2 SNORA25B-201ENST00000365507 128 ntBASIC2.6□□□□□ -1.99
CDC42EP3Q9UKI2 RNU6-22P-201ENST00000384355 107 ntBASIC2.6□□□□□ -1.99
CDC42EP3Q9UKI2 MIR1261-201ENST00000408659 82 ntBASIC2.6□□□□□ -1.99
CDC42EP3Q9UKI2 SRIP3-201ENST00000413200 219 ntBASIC2.6□□□□□ -1.99
CDC42EP3Q9UKI2 RPL30P13-201ENST00000418873 348 ntBASIC2.6□□□□□ -1.99
CDC42EP3Q9UKI2 AL353689.1-201ENST00000438895 199 ntBASIC2.6□□□□□ -1.99
CDC42EP3Q9UKI2 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.6□□□□□ -1.99
CDC42EP3Q9UKI2 GTF3AP2-201ENST00000557014 266 ntBASIC2.6□□□□□ -1.99
CDC42EP3Q9UKI2 AL353149.1-201ENST00000610667 244 ntBASIC2.6□□□□□ -1.99
CDC42EP3Q9UKI2 uc_338.1-201ENST00000612113 180 ntBASIC2.6□□□□□ -1.99
CDC42EP3Q9UKI2 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.6□□□□□ -1.99
CDC42EP3Q9UKI2 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.6□□□□□ -1.99
CDC42EP3Q9UKI2 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.6□□□□□ -1.99
CDC42EP3Q9UKI2 AC093831.2-201ENST00000624393 3427 ntBASIC2.6□□□□□ -1.99
CDC42EP3Q9UKI2 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CDC42EP3Q9UKI2 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CDC42EP3Q9UKI2 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.59□□□□□ -1.99
CDC42EP3Q9UKI2 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CDC42EP3Q9UKI2 Y_RNA.203-201ENST00000364106 102 ntBASIC2.59□□□□□ -1.99
CDC42EP3Q9UKI2 RNA5SP125-201ENST00000364843 120 ntBASIC2.59□□□□□ -1.99
CDC42EP3Q9UKI2 SNORD15B-201ENST00000384714 146 ntBASIC2.59□□□□□ -1.99
CDC42EP3Q9UKI2 SNORA40-201ENST00000388090 126 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms