Protein–RNA interactions for Protein: Q9NS15

LTBP3, Latent-transforming growth factor beta-binding protein 3, humanhuman

Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3Q9NS15 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.19□□□□□ -1.9
LTBP3Q9NS15 RNA5SP490-201ENST00000517141 136 ntBASIC3.19□□□□□ -1.9
LTBP3Q9NS15 AC006435.5-201ENST00000624486 112 ntBASIC3.19□□□□□ -1.9
LTBP3Q9NS15 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LTBP3Q9NS15 Y_RNA.121-201ENST00000363309 113 ntBASIC3.18□□□□□ -1.9
LTBP3Q9NS15 Y_RNA.182-201ENST00000363880 111 ntBASIC3.18□□□□□ -1.9
LTBP3Q9NS15 MIR561-201ENST00000385216 97 ntBASIC3.18□□□□□ -1.9
LTBP3Q9NS15 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.18□□□□□ -1.9
LTBP3Q9NS15 SNORA26.5-201ENST00000391215 123 ntBASIC3.18□□□□□ -1.9
LTBP3Q9NS15 RPL23AP7-203ENST00000449021 469 ntBASIC3.18□□□□□ -1.9
LTBP3Q9NS15 RNU6-965P-201ENST00000516721 96 ntBASIC3.18□□□□□ -1.9
LTBP3Q9NS15 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.17□□□□□ -1.9
LTBP3Q9NS15 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.17□□□□□ -1.9
LTBP3Q9NS15 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
LTBP3Q9NS15 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
LTBP3Q9NS15 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LTBP3Q9NS15 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
LTBP3Q9NS15 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.17□□□□□ -1.9
LTBP3Q9NS15 AL021368.2-201ENST00000606125 5352 ntBASIC3.17□□□□□ -1.9
LTBP3Q9NS15 SNORA20B-201ENST00000384220 132 ntBASIC3.17□□□□□ -1.9
LTBP3Q9NS15 RNU6-239P-201ENST00000390990 99 ntBASIC3.17□□□□□ -1.9
LTBP3Q9NS15 RPS20P10-201ENST00000451209 253 ntBASIC3.17□□□□□ -1.9
LTBP3Q9NS15 UQCRHP3-201ENST00000451503 251 ntBASIC3.17□□□□□ -1.9
LTBP3Q9NS15 SNORD65B-201ENST00000459126 73 ntBASIC3.17□□□□□ -1.9
LTBP3Q9NS15 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.17□□□□□ -1.9
LTBP3Q9NS15 RNU6-1234P-201ENST00000516877 103 ntBASIC3.17□□□□□ -1.9
LTBP3Q9NS15 MIR5688-201ENST00000580619 83 ntBASIC3.17□□□□□ -1.9
LTBP3Q9NS15 AL355297.2-201ENST00000604792 129 ntBASIC3.17□□□□□ -1.9
LTBP3Q9NS15 AL449363.1-201ENST00000617815 186 ntBASIC3.17□□□□□ -1.9
LTBP3Q9NS15 MIR1248-201ENST00000629190 106 ntBASIC3.17□□□□□ -1.9
LTBP3Q9NS15 AC138915.1-201ENST00000565427 1685 ntBASIC3.16□□□□□ -1.9
LTBP3Q9NS15 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.16□□□□□ -1.9
LTBP3Q9NS15 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LTBP3Q9NS15 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LTBP3Q9NS15 MIR423-201ENST00000362201 94 ntBASIC3.16□□□□□ -1.9
LTBP3Q9NS15 SNORA27.1-201ENST00000362604 124 ntBASIC3.16□□□□□ -1.9
LTBP3Q9NS15 SNORD14D-201ENST00000384390 87 ntBASIC3.16□□□□□ -1.9
LTBP3Q9NS15 AL355796.1-201ENST00000406706 323 ntBASIC3.16□□□□□ -1.9
LTBP3Q9NS15 RHEBP3-201ENST00000411920 351 ntBASIC3.16□□□□□ -1.9
LTBP3Q9NS15 AL135790.2-201ENST00000437701 267 ntBASIC3.16□□□□□ -1.9
LTBP3Q9NS15 Y_RNA.686-201ENST00000516548 134 ntBASIC3.16□□□□□ -1.9
LTBP3Q9NS15 RNU7-121P-201ENST00000516604 62 ntBASIC3.16□□□□□ -1.9
LTBP3Q9NS15 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.16□□□□□ -1.9
LTBP3Q9NS15 MIR1273D-201ENST00000577266 86 ntBASIC3.16□□□□□ -1.9
LTBP3Q9NS15 MIR3605-201ENST00000583214 100 ntBASIC3.16□□□□□ -1.9
LTBP3Q9NS15 AC108206.1-201ENST00000570186 4159 ntBASIC3.16□□□□□ -1.9
LTBP3Q9NS15 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
LTBP3Q9NS15 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
LTBP3Q9NS15 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.15□□□□□ -1.91
LTBP3Q9NS15 RNU6-834P-201ENST00000362367 110 ntBASIC3.15□□□□□ -1.91
LTBP3Q9NS15 Y_RNA.293-201ENST00000364908 93 ntBASIC3.15□□□□□ -1.91
LTBP3Q9NS15 RNU6-144P-201ENST00000383951 107 ntBASIC3.15□□□□□ -1.91
LTBP3Q9NS15 SNORA8.3-201ENST00000384679 139 ntBASIC3.15□□□□□ -1.91
LTBP3Q9NS15 RPL30P13-201ENST00000418873 348 ntBASIC3.15□□□□□ -1.91
LTBP3Q9NS15 HMGN2P3-201ENST00000433603 273 ntBASIC3.15□□□□□ -1.91
LTBP3Q9NS15 HMGN2P5-201ENST00000436882 273 ntBASIC3.15□□□□□ -1.91
LTBP3Q9NS15 RPL23AP58-201ENST00000440453 469 ntBASIC3.15□□□□□ -1.91
LTBP3Q9NS15 AC016717.1-201ENST00000448918 286 ntBASIC3.15□□□□□ -1.91
LTBP3Q9NS15 RN7SL442P-201ENST00000473804 320 ntBASIC3.15□□□□□ -1.91
LTBP3Q9NS15 AC025647.1-201ENST00000517879 253 ntBASIC3.15□□□□□ -1.91
LTBP3Q9NS15 AC100767.1-201ENST00000528178 123 ntBASIC3.15□□□□□ -1.91
LTBP3Q9NS15 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.15□□□□□ -1.91
LTBP3Q9NS15 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.15□□□□□ -1.91
LTBP3Q9NS15 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.15□□□□□ -1.91
LTBP3Q9NS15 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
LTBP3Q9NS15 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.15□□□□□ -1.91
LTBP3Q9NS15 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.14□□□□□ -1.91
LTBP3Q9NS15 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LTBP3Q9NS15 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
LTBP3Q9NS15 RNU6-1240P-201ENST00000365155 104 ntBASIC3.14□□□□□ -1.91
LTBP3Q9NS15 RNU6-418P-201ENST00000384035 107 ntBASIC3.14□□□□□ -1.91
LTBP3Q9NS15 RNU6-80P-201ENST00000384195 107 ntBASIC3.14□□□□□ -1.91
LTBP3Q9NS15 AL138878.1-201ENST00000405131 347 ntBASIC3.14□□□□□ -1.91
LTBP3Q9NS15 AL357134.1-201ENST00000445848 426 ntBASIC3.14□□□□□ -1.91
LTBP3Q9NS15 RNU6-1211P-201ENST00000459179 105 ntBASIC3.14□□□□□ -1.91
LTBP3Q9NS15 RPL36AP21-201ENST00000490372 323 ntBASIC3.14□□□□□ -1.91
LTBP3Q9NS15 RN7SL636P-201ENST00000497504 294 ntBASIC3.14□□□□□ -1.91
LTBP3Q9NS15 PDCD5P2-201ENST00000507570 312 ntBASIC3.14□□□□□ -1.91
LTBP3Q9NS15 SNORA4.4-201ENST00000515921 135 ntBASIC3.14□□□□□ -1.91
LTBP3Q9NS15 RNU4-57P-201ENST00000515980 135 ntBASIC3.14□□□□□ -1.91
LTBP3Q9NS15 SNORA25.12-201ENST00000516202 82 ntBASIC3.14□□□□□ -1.91
LTBP3Q9NS15 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.14□□□□□ -1.91
LTBP3Q9NS15 Y_RNA.802-201ENST00000614892 130 ntBASIC3.14□□□□□ -1.91
LTBP3Q9NS15 AL391516.1-201ENST00000554380 2449 ntBASIC3.14□□□□□ -1.91
LTBP3Q9NS15 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LTBP3Q9NS15 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.13□□□□□ -1.91
LTBP3Q9NS15 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LTBP3Q9NS15 AC092881.1-201ENST00000638218 2733 ntBASIC3.13□□□□□ -1.91
LTBP3Q9NS15 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LTBP3Q9NS15 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
LTBP3Q9NS15 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
LTBP3Q9NS15 RNU6-1205P-201ENST00000363625 106 ntBASIC3.13□□□□□ -1.91
LTBP3Q9NS15 RNU6-103P-201ENST00000363686 107 ntBASIC3.13□□□□□ -1.91
LTBP3Q9NS15 RNU6-275P-201ENST00000364910 107 ntBASIC3.13□□□□□ -1.91
LTBP3Q9NS15 MIR539-201ENST00000365690 78 ntBASIC3.13□□□□□ -1.91
LTBP3Q9NS15 SNORA20-201ENST00000384662 132 ntBASIC3.13□□□□□ -1.91
LTBP3Q9NS15 AC123900.1-201ENST00000420390 96 ntBASIC3.13□□□□□ -1.91
LTBP3Q9NS15 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.13□□□□□ -1.91
LTBP3Q9NS15 HSPE1P21-201ENST00000438283 308 ntBASIC3.13□□□□□ -1.91
LTBP3Q9NS15 RPS12P2-201ENST00000439728 269 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms