Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 JPX_2.1-201ENST00000614161 69 ntBASIC3.69□□□□□ -1.82
NUCKS1Q9H1E3 Y_RNA.818-201ENST00000618813 71 ntBASIC3.69□□□□□ -1.82
NUCKS1Q9H1E3 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
NUCKS1Q9H1E3 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NUCKS1Q9H1E3 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
NUCKS1Q9H1E3 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.68□□□□□ -1.82
NUCKS1Q9H1E3 AC002546.1-201ENST00000588041 2504 ntBASIC3.68□□□□□ -1.82
NUCKS1Q9H1E3 RNU6-234P-201ENST00000365229 104 ntBASIC3.68□□□□□ -1.82
NUCKS1Q9H1E3 SNORD61-201ENST00000384252 73 ntBASIC3.68□□□□□ -1.82
NUCKS1Q9H1E3 RNU6-820P-201ENST00000384273 107 ntBASIC3.68□□□□□ -1.82
NUCKS1Q9H1E3 MIR218-2-201ENST00000385006 110 ntBASIC3.68□□□□□ -1.82
NUCKS1Q9H1E3 AL117342.1-201ENST00000404861 406 ntBASIC3.68□□□□□ -1.82
NUCKS1Q9H1E3 AL031121.1-201ENST00000406553 254 ntBASIC3.68□□□□□ -1.82
NUCKS1Q9H1E3 AC008134.1-201ENST00000420943 193 ntBASIC3.68□□□□□ -1.82
NUCKS1Q9H1E3 MTATP8P2-201ENST00000435212 202 ntBASIC3.68□□□□□ -1.82
NUCKS1Q9H1E3 MRPS17P9-201ENST00000511924 393 ntBASIC3.68□□□□□ -1.82
NUCKS1Q9H1E3 RNU6ATAC17P-201ENST00000516074 71 ntBASIC3.68□□□□□ -1.82
NUCKS1Q9H1E3 RNU6-948P-201ENST00000516374 107 ntBASIC3.68□□□□□ -1.82
NUCKS1Q9H1E3 SCARNA15-202ENST00000516881 127 ntBASIC3.68□□□□□ -1.82
NUCKS1Q9H1E3 RNU6-158P-201ENST00000517104 100 ntBASIC3.68□□□□□ -1.82
NUCKS1Q9H1E3 RNU6-1270P-201ENST00000517128 108 ntBASIC3.68□□□□□ -1.82
NUCKS1Q9H1E3 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.68□□□□□ -1.82
NUCKS1Q9H1E3 AC008739.3-201ENST00000603262 127 ntBASIC3.68□□□□□ -1.82
NUCKS1Q9H1E3 uc_338.14-201ENST00000613162 166 ntBASIC3.68□□□□□ -1.82
NUCKS1Q9H1E3 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.68□□□□□ -1.82
NUCKS1Q9H1E3 AC090517.3-201ENST00000625170 141 ntBASIC3.68□□□□□ -1.82
NUCKS1Q9H1E3 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
NUCKS1Q9H1E3 AP003122.5-201ENST00000527668 3766 ntBASIC3.68□□□□□ -1.82
NUCKS1Q9H1E3 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.68□□□□□ -1.82
NUCKS1Q9H1E3 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NUCKS1Q9H1E3 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NUCKS1Q9H1E3 Y_RNA.198-201ENST00000364013 98 ntBASIC3.67□□□□□ -1.82
NUCKS1Q9H1E3 SNORD31B-201ENST00000364977 69 ntBASIC3.67□□□□□ -1.82
NUCKS1Q9H1E3 RNU6-1240P-201ENST00000365155 104 ntBASIC3.67□□□□□ -1.82
NUCKS1Q9H1E3 RNU6-418P-201ENST00000384035 107 ntBASIC3.67□□□□□ -1.82
NUCKS1Q9H1E3 RNU6-1152P-201ENST00000384576 107 ntBASIC3.67□□□□□ -1.82
NUCKS1Q9H1E3 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.67□□□□□ -1.82
NUCKS1Q9H1E3 NDUFA4P2-201ENST00000489989 244 ntBASIC3.67□□□□□ -1.82
NUCKS1Q9H1E3 SNORA64.4-201ENST00000516632 81 ntBASIC3.67□□□□□ -1.82
NUCKS1Q9H1E3 AC104027.1-201ENST00000521887 300 ntBASIC3.67□□□□□ -1.82
NUCKS1Q9H1E3 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.67□□□□□ -1.82
NUCKS1Q9H1E3 MIR5009-201ENST00000578736 100 ntBASIC3.67□□□□□ -1.82
NUCKS1Q9H1E3 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.67□□□□□ -1.82
NUCKS1Q9H1E3 AC013412.1-201ENST00000610687 192 ntBASIC3.67□□□□□ -1.82
NUCKS1Q9H1E3 MALAT1.1-201ENST00000618249 95 ntBASIC3.67□□□□□ -1.82
NUCKS1Q9H1E3 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
NUCKS1Q9H1E3 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NUCKS1Q9H1E3 AL356274.2-201ENST00000624379 3752 ntBASIC3.67□□□□□ -1.82
NUCKS1Q9H1E3 AC009487.4-201ENST00000624969 3585 ntBASIC3.66□□□□□ -1.82
NUCKS1Q9H1E3 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
NUCKS1Q9H1E3 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.66□□□□□ -1.82
NUCKS1Q9H1E3 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.66□□□□□ -1.82
NUCKS1Q9H1E3 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NUCKS1Q9H1E3 RNU6-888P-201ENST00000363010 101 ntBASIC3.66□□□□□ -1.82
NUCKS1Q9H1E3 RNY4P6-201ENST00000363667 96 ntBASIC3.66□□□□□ -1.82
NUCKS1Q9H1E3 RNU6-1235P-201ENST00000384559 107 ntBASIC3.66□□□□□ -1.82
NUCKS1Q9H1E3 AC097463.2-201ENST00000421074 142 ntBASIC3.66□□□□□ -1.82
NUCKS1Q9H1E3 RNU6-498P-201ENST00000459468 107 ntBASIC3.66□□□□□ -1.82
NUCKS1Q9H1E3 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.66□□□□□ -1.82
NUCKS1Q9H1E3 RNU7-172P-201ENST00000517125 64 ntBASIC3.66□□□□□ -1.82
NUCKS1Q9H1E3 AC068657.1-201ENST00000520807 306 ntBASIC3.66□□□□□ -1.82
NUCKS1Q9H1E3 IGKV3-31-201ENST00000523109 329 ntBASIC3.66□□□□□ -1.82
NUCKS1Q9H1E3 MIR4438-201ENST00000585271 93 ntBASIC3.66□□□□□ -1.82
NUCKS1Q9H1E3 SNORD115-40-201ENST00000606510 82 ntBASIC3.66□□□□□ -1.82
NUCKS1Q9H1E3 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
NUCKS1Q9H1E3 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC3.66□□□□□ -1.82
NUCKS1Q9H1E3 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NUCKS1Q9H1E3 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.65□□□□□ -1.82
NUCKS1Q9H1E3 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
NUCKS1Q9H1E3 MIR490-201ENST00000384865 128 ntBASIC3.65□□□□□ -1.83
NUCKS1Q9H1E3 SNORD78.1-201ENST00000390866 65 ntBASIC3.65□□□□□ -1.83
NUCKS1Q9H1E3 SNORD77.3-201ENST00000391113 65 ntBASIC3.65□□□□□ -1.83
NUCKS1Q9H1E3 RN7SKP123-201ENST00000410732 291 ntBASIC3.65□□□□□ -1.83
NUCKS1Q9H1E3 AC025518.1-201ENST00000479856 347 ntBASIC3.65□□□□□ -1.83
NUCKS1Q9H1E3 RN7SL293P-201ENST00000481765 281 ntBASIC3.65□□□□□ -1.83
NUCKS1Q9H1E3 AC006445.1-201ENST00000491925 405 ntBASIC3.65□□□□□ -1.83
NUCKS1Q9H1E3 RNU6-240P-201ENST00000516098 97 ntBASIC3.65□□□□□ -1.83
NUCKS1Q9H1E3 AC068339.1-201ENST00000526965 141 ntBASIC3.65□□□□□ -1.83
NUCKS1Q9H1E3 AC134878.1-201ENST00000619901 243 ntBASIC3.65□□□□□ -1.83
NUCKS1Q9H1E3 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NUCKS1Q9H1E3 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
NUCKS1Q9H1E3 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
NUCKS1Q9H1E3 RNU6-944P-201ENST00000364023 107 ntBASIC3.64□□□□□ -1.83
NUCKS1Q9H1E3 Y_RNA.219-201ENST00000364232 113 ntBASIC3.64□□□□□ -1.83
NUCKS1Q9H1E3 MIR183-201ENST00000384958 110 ntBASIC3.64□□□□□ -1.83
NUCKS1Q9H1E3 AL513477.1-202ENST00000417061 214 ntBASIC3.64□□□□□ -1.83
NUCKS1Q9H1E3 Z98742.2-201ENST00000431564 187 ntBASIC3.64□□□□□ -1.83
NUCKS1Q9H1E3 AC109327.2-201ENST00000448339 378 ntBASIC3.64□□□□□ -1.83
NUCKS1Q9H1E3 RNU6-1146P-201ENST00000516282 102 ntBASIC3.64□□□□□ -1.83
NUCKS1Q9H1E3 AC074050.1-201ENST00000563247 211 ntBASIC3.64□□□□□ -1.83
NUCKS1Q9H1E3 AC002076.2-201ENST00000617362 122 ntBASIC3.64□□□□□ -1.83
NUCKS1Q9H1E3 AC012314.7-201ENST00000619693 93 ntBASIC3.64□□□□□ -1.83
NUCKS1Q9H1E3 AC015726.2-201ENST00000620112 122 ntBASIC3.64□□□□□ -1.83
NUCKS1Q9H1E3 MIR2052-201ENST00000636055 55 ntBASIC3.64□□□□□ -1.83
NUCKS1Q9H1E3 U6.105-201ENST00000637379 88 ntBASIC3.64□□□□□ -1.83
NUCKS1Q9H1E3 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NUCKS1Q9H1E3 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.83
NUCKS1Q9H1E3 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.63□□□□□ -1.83
NUCKS1Q9H1E3 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
NUCKS1Q9H1E3 MIR494-201ENST00000349529 81 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 190.2 ms