Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC2.78□□□□□ -1.96
KRTAP3-3Q9BYR6 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
KRTAP3-3Q9BYR6 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
KRTAP3-3Q9BYR6 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
KRTAP3-3Q9BYR6 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
KRTAP3-3Q9BYR6 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
KRTAP3-3Q9BYR6 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
KRTAP3-3Q9BYR6 SNORA63.1-201ENST00000362493 131 ntBASIC2.78□□□□□ -1.96
KRTAP3-3Q9BYR6 SNORD114-4-201ENST00000363962 75 ntBASIC2.78□□□□□ -1.96
KRTAP3-3Q9BYR6 RNU1-44P-201ENST00000384453 163 ntBASIC2.78□□□□□ -1.96
KRTAP3-3Q9BYR6 MIR519E-201ENST00000385075 84 ntBASIC2.78□□□□□ -1.96
KRTAP3-3Q9BYR6 SNORD41-201ENST00000386967 70 ntBASIC2.78□□□□□ -1.96
KRTAP3-3Q9BYR6 RNA5SP465-201ENST00000391195 109 ntBASIC2.78□□□□□ -1.96
KRTAP3-3Q9BYR6 RNA5SP231-201ENST00000410496 138 ntBASIC2.78□□□□□ -1.96
KRTAP3-3Q9BYR6 AZGP1P2-201ENST00000454506 345 ntBASIC2.78□□□□□ -1.96
KRTAP3-3Q9BYR6 SNORD59.2-201ENST00000516873 68 ntBASIC2.78□□□□□ -1.96
KRTAP3-3Q9BYR6 IGKV3D-25-201ENST00000519599 235 ntBASIC2.78□□□□□ -1.96
KRTAP3-3Q9BYR6 AL353746.1-201ENST00000566293 6881 ntBASIC2.78□□□□□ -1.96
KRTAP3-3Q9BYR6 GHR-213ENST00000622294 4312 ntTSL 5 BASIC2.78□□□□□ -1.96
KRTAP3-3Q9BYR6 MAPK10-373ENST00000641983 6772 ntBASIC2.78□□□□□ -1.96
KRTAP3-3Q9BYR6 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC2.78□□□□□ -1.96
KRTAP3-3Q9BYR6 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
KRTAP3-3Q9BYR6 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
KRTAP3-3Q9BYR6 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
KRTAP3-3Q9BYR6 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
KRTAP3-3Q9BYR6 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC2.78□□□□□ -1.96
KRTAP3-3Q9BYR6 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
KRTAP3-3Q9BYR6 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
KRTAP3-3Q9BYR6 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
KRTAP3-3Q9BYR6 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
KRTAP3-3Q9BYR6 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
KRTAP3-3Q9BYR6 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
KRTAP3-3Q9BYR6 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
KRTAP3-3Q9BYR6 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
KRTAP3-3Q9BYR6 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
KRTAP3-3Q9BYR6 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC2.77□□□□□ -1.97
KRTAP3-3Q9BYR6 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
KRTAP3-3Q9BYR6 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
KRTAP3-3Q9BYR6 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
KRTAP3-3Q9BYR6 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
KRTAP3-3Q9BYR6 RNA5SP50-201ENST00000363731 107 ntBASIC2.77□□□□□ -1.97
KRTAP3-3Q9BYR6 SNORA25.8-201ENST00000364831 128 ntBASIC2.77□□□□□ -1.97
KRTAP3-3Q9BYR6 RNU6-742P-201ENST00000365289 107 ntBASIC2.77□□□□□ -1.97
KRTAP3-3Q9BYR6 RNU6-172P-201ENST00000411000 93 ntBASIC2.77□□□□□ -1.97
KRTAP3-3Q9BYR6 AC003982.1-202ENST00000469928 248 ntBASIC2.77□□□□□ -1.97
KRTAP3-3Q9BYR6 RN7SL481P-201ENST00000477764 299 ntBASIC2.77□□□□□ -1.97
KRTAP3-3Q9BYR6 RN7SL459P-201ENST00000481078 302 ntBASIC2.77□□□□□ -1.97
KRTAP3-3Q9BYR6 MIR4474-201ENST00000579189 78 ntBASIC2.77□□□□□ -1.97
KRTAP3-3Q9BYR6 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.77□□□□□ -1.97
KRTAP3-3Q9BYR6 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
KRTAP3-3Q9BYR6 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
KRTAP3-3Q9BYR6 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC2.77□□□□□ -1.97
KRTAP3-3Q9BYR6 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
KRTAP3-3Q9BYR6 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
KRTAP3-3Q9BYR6 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC2.77□□□□□ -1.97
KRTAP3-3Q9BYR6 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC2.76□□□□□ -1.97
KRTAP3-3Q9BYR6 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC2.76□□□□□ -1.97
KRTAP3-3Q9BYR6 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
KRTAP3-3Q9BYR6 Y_RNA.74-201ENST00000362911 99 ntBASIC2.76□□□□□ -1.97
KRTAP3-3Q9BYR6 SNORA51.9-201ENST00000384295 124 ntBASIC2.76□□□□□ -1.97
KRTAP3-3Q9BYR6 MIR130B-202ENST00000385018 82 ntBASIC2.76□□□□□ -1.97
KRTAP3-3Q9BYR6 RNU6-1246P-201ENST00000391064 107 ntBASIC2.76□□□□□ -1.97
KRTAP3-3Q9BYR6 RNU6-721P-201ENST00000410155 105 ntBASIC2.76□□□□□ -1.97
KRTAP3-3Q9BYR6 RNA5SP95-201ENST00000410319 137 ntBASIC2.76□□□□□ -1.97
KRTAP3-3Q9BYR6 TMEM183AP1-205ENST00000432739 290 ntBASIC2.76□□□□□ -1.97
KRTAP3-3Q9BYR6 snoU13.13-201ENST00000458842 104 ntBASIC2.76□□□□□ -1.97
KRTAP3-3Q9BYR6 RN7SKP35-201ENST00000517210 151 ntBASIC2.76□□□□□ -1.97
KRTAP3-3Q9BYR6 MT1CP-201ENST00000567054 174 ntBASIC2.76□□□□□ -1.97
KRTAP3-3Q9BYR6 MIR4660-201ENST00000583549 74 ntBASIC2.76□□□□□ -1.97
KRTAP3-3Q9BYR6 MIR7853-201ENST00000584820 132 ntBASIC2.76□□□□□ -1.97
KRTAP3-3Q9BYR6 AL645939.4-201ENST00000604495 135 ntBASIC2.76□□□□□ -1.97
KRTAP3-3Q9BYR6 AC022202.1-201ENST00000613515 211 ntBASIC2.76□□□□□ -1.97
KRTAP3-3Q9BYR6 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
KRTAP3-3Q9BYR6 AP006437.1-201ENST00000641440 3685 ntBASIC2.76□□□□□ -1.97
KRTAP3-3Q9BYR6 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC2.76□□□□□ -1.97
KRTAP3-3Q9BYR6 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
KRTAP3-3Q9BYR6 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
KRTAP3-3Q9BYR6 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
KRTAP3-3Q9BYR6 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.75□□□□□ -1.97
KRTAP3-3Q9BYR6 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
KRTAP3-3Q9BYR6 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
KRTAP3-3Q9BYR6 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
KRTAP3-3Q9BYR6 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
KRTAP3-3Q9BYR6 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
KRTAP3-3Q9BYR6 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
KRTAP3-3Q9BYR6 RNA5SP403-201ENST00000363598 108 ntBASIC2.75□□□□□ -1.97
KRTAP3-3Q9BYR6 MIR1283-2-201ENST00000408621 87 ntBASIC2.75□□□□□ -1.97
KRTAP3-3Q9BYR6 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC2.75□□□□□ -1.97
KRTAP3-3Q9BYR6 RPL12P49-201ENST00000441100 121 ntBASIC2.75□□□□□ -1.97
KRTAP3-3Q9BYR6 RPS17P15-201ENST00000475609 349 ntBASIC2.75□□□□□ -1.97
KRTAP3-3Q9BYR6 RN7SL570P-201ENST00000484405 292 ntBASIC2.75□□□□□ -1.97
KRTAP3-3Q9BYR6 AC021678.3-201ENST00000517893 476 ntBASIC2.75□□□□□ -1.97
KRTAP3-3Q9BYR6 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC2.75□□□□□ -1.97
KRTAP3-3Q9BYR6 MIR4776-2-201ENST00000580204 80 ntBASIC2.75□□□□□ -1.97
KRTAP3-3Q9BYR6 RN7SL66P-201ENST00000582099 264 ntBASIC2.75□□□□□ -1.97
KRTAP3-3Q9BYR6 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
KRTAP3-3Q9BYR6 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
KRTAP3-3Q9BYR6 MAPK10-303ENST00000641324 3959 ntBASIC2.75□□□□□ -1.97
KRTAP3-3Q9BYR6 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC2.75□□□□□ -1.97
KRTAP3-3Q9BYR6 ZNF658B-202ENST00000615961 3375 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms