Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 FAS-AS1.2-201ENST00000620386 170 ntBASIC3.71□□□□□ -1.82
USB1Q9BQ65 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.71□□□□□ -1.82
USB1Q9BQ65 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.71□□□□□ -1.82
USB1Q9BQ65 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
USB1Q9BQ65 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.7□□□□□ -1.82
USB1Q9BQ65 RNU6-661P-201ENST00000362409 107 ntBASIC3.7□□□□□ -1.82
USB1Q9BQ65 SNORA80E-201ENST00000384744 137 ntBASIC3.7□□□□□ -1.82
USB1Q9BQ65 SNORA57.1-201ENST00000391227 145 ntBASIC3.7□□□□□ -1.82
USB1Q9BQ65 PTMAP2-201ENST00000397627 327 ntBASIC3.7□□□□□ -1.82
USB1Q9BQ65 RN7SKP200-201ENST00000410564 320 ntBASIC3.7□□□□□ -1.82
USB1Q9BQ65 MIR1911-201ENST00000410783 80 ntBASIC3.7□□□□□ -1.82
USB1Q9BQ65 AC096949.1-201ENST00000412047 152 ntBASIC3.7□□□□□ -1.82
USB1Q9BQ65 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.7□□□□□ -1.82
USB1Q9BQ65 ABCF2P2-201ENST00000450549 296 ntBASIC3.7□□□□□ -1.82
USB1Q9BQ65 AL109933.2-201ENST00000452651 260 ntBASIC3.7□□□□□ -1.82
USB1Q9BQ65 RNA5SP519-201ENST00000516480 119 ntBASIC3.7□□□□□ -1.82
USB1Q9BQ65 AL356280.1-201ENST00000603614 379 ntBASIC3.7□□□□□ -1.82
USB1Q9BQ65 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
USB1Q9BQ65 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
USB1Q9BQ65 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.69□□□□□ -1.82
USB1Q9BQ65 RNU1-15P-201ENST00000353977 144 ntBASIC3.69□□□□□ -1.82
USB1Q9BQ65 RNU6-170P-201ENST00000362832 104 ntBASIC3.69□□□□□ -1.82
USB1Q9BQ65 RNU6-363P-201ENST00000362895 105 ntBASIC3.69□□□□□ -1.82
USB1Q9BQ65 RNU6-832P-201ENST00000363319 107 ntBASIC3.69□□□□□ -1.82
USB1Q9BQ65 RNU6-497P-201ENST00000365316 104 ntBASIC3.69□□□□□ -1.82
USB1Q9BQ65 RNU6-1276P-201ENST00000365372 104 ntBASIC3.69□□□□□ -1.82
USB1Q9BQ65 RNU6-409P-201ENST00000384114 104 ntBASIC3.69□□□□□ -1.82
USB1Q9BQ65 MIR515-2-201ENST00000384883 83 ntBASIC3.69□□□□□ -1.82
USB1Q9BQ65 MIR515-1-201ENST00000384884 83 ntBASIC3.69□□□□□ -1.82
USB1Q9BQ65 MIR577-201ENST00000385196 96 ntBASIC3.69□□□□□ -1.82
USB1Q9BQ65 RNU6-733P-201ENST00000410759 104 ntBASIC3.69□□□□□ -1.82
USB1Q9BQ65 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.69□□□□□ -1.82
USB1Q9BQ65 AL162151.2-201ENST00000448875 158 ntBASIC3.69□□□□□ -1.82
USB1Q9BQ65 RPS29P19-201ENST00000479709 171 ntBASIC3.69□□□□□ -1.82
USB1Q9BQ65 RN7SL271P-201ENST00000487601 295 ntBASIC3.69□□□□□ -1.82
USB1Q9BQ65 AL163195.1-201ENST00000496941 348 ntBASIC3.69□□□□□ -1.82
USB1Q9BQ65 RNA5SP143-201ENST00000516936 115 ntBASIC3.69□□□□□ -1.82
USB1Q9BQ65 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.69□□□□□ -1.82
USB1Q9BQ65 MIR4474-201ENST00000579189 78 ntBASIC3.69□□□□□ -1.82
USB1Q9BQ65 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.69□□□□□ -1.82
USB1Q9BQ65 ZYXP1-201ENST00000617638 118 ntBASIC3.69□□□□□ -1.82
USB1Q9BQ65 AC068724.3-201ENST00000625906 87 ntBASIC3.69□□□□□ -1.82
USB1Q9BQ65 CTSLP2-204ENST00000629029 392 ntBASIC3.69□□□□□ -1.82
USB1Q9BQ65 MIR203B-201ENST00000636080 86 ntBASIC3.69□□□□□ -1.82
USB1Q9BQ65 MIR1255B1-201ENST00000636325 63 ntBASIC3.69□□□□□ -1.82
USB1Q9BQ65 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.69□□□□□ -1.82
USB1Q9BQ65 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
USB1Q9BQ65 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
USB1Q9BQ65 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.69□□□□□ -1.82
USB1Q9BQ65 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
USB1Q9BQ65 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.68□□□□□ -1.82
USB1Q9BQ65 Y_RNA.360-201ENST00000365512 102 ntBASIC3.68□□□□□ -1.82
USB1Q9BQ65 RNU6-628P-201ENST00000410675 107 ntBASIC3.68□□□□□ -1.82
USB1Q9BQ65 AL035398.1-201ENST00000430869 322 ntBASIC3.68□□□□□ -1.82
USB1Q9BQ65 RPS23P4-201ENST00000487908 423 ntBASIC3.68□□□□□ -1.82
USB1Q9BQ65 RN7SL604P-201ENST00000492589 296 ntBASIC3.68□□□□□ -1.82
USB1Q9BQ65 RNA5SP367-201ENST00000516557 118 ntBASIC3.68□□□□□ -1.82
USB1Q9BQ65 IGHVII-40-1-201ENST00000517316 58 ntBASIC3.68□□□□□ -1.82
USB1Q9BQ65 AC024995.1-201ENST00000523014 93 ntBASIC3.68□□□□□ -1.82
USB1Q9BQ65 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.68□□□□□ -1.82
USB1Q9BQ65 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.68□□□□□ -1.82
USB1Q9BQ65 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
USB1Q9BQ65 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.68□□□□□ -1.82
USB1Q9BQ65 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
USB1Q9BQ65 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.68□□□□□ -1.82
USB1Q9BQ65 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.68□□□□□ -1.82
USB1Q9BQ65 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.67□□□□□ -1.82
USB1Q9BQ65 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
USB1Q9BQ65 Y_RNA.73-201ENST00000362910 113 ntBASIC3.67□□□□□ -1.82
USB1Q9BQ65 SNORD115-19-201ENST00000363098 82 ntBASIC3.67□□□□□ -1.82
USB1Q9BQ65 SNORD115-18-201ENST00000363293 82 ntBASIC3.67□□□□□ -1.82
USB1Q9BQ65 SNORD115-17-201ENST00000364612 82 ntBASIC3.67□□□□□ -1.82
USB1Q9BQ65 RNA5SP479-201ENST00000364858 117 ntBASIC3.67□□□□□ -1.82
USB1Q9BQ65 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
USB1Q9BQ65 AL451046.2-201ENST00000403074 277 ntBASIC3.67□□□□□ -1.82
USB1Q9BQ65 RNA5SP144-201ENST00000410846 116 ntBASIC3.67□□□□□ -1.82
USB1Q9BQ65 ATP5J2P3-201ENST00000451550 258 ntBASIC3.67□□□□□ -1.82
USB1Q9BQ65 AC004812.1-201ENST00000540773 146 ntBASIC3.67□□□□□ -1.82
USB1Q9BQ65 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.67□□□□□ -1.82
USB1Q9BQ65 AL513534.2-201ENST00000603836 250 ntBASIC3.67□□□□□ -1.82
USB1Q9BQ65 Y_RNA.773-201ENST00000607168 90 ntBASIC3.67□□□□□ -1.82
USB1Q9BQ65 AL161912.2-201ENST00000565707 3007 ntBASIC3.67□□□□□ -1.82
USB1Q9BQ65 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
USB1Q9BQ65 MAPK10-373ENST00000641983 6772 ntBASIC3.67□□□□□ -1.82
USB1Q9BQ65 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
USB1Q9BQ65 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.66□□□□□ -1.82
USB1Q9BQ65 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
USB1Q9BQ65 RNA5SP139-201ENST00000364340 117 ntBASIC3.66□□□□□ -1.82
USB1Q9BQ65 RNU4-67P-201ENST00000364569 141 ntBASIC3.66□□□□□ -1.82
USB1Q9BQ65 SNORD66.1-201ENST00000391230 76 ntBASIC3.66□□□□□ -1.82
USB1Q9BQ65 RNA5SP317-201ENST00000410176 116 ntBASIC3.66□□□□□ -1.82
USB1Q9BQ65 RNU2-63P-201ENST00000410792 194 ntBASIC3.66□□□□□ -1.82
USB1Q9BQ65 RNA5SP311-201ENST00000411290 116 ntBASIC3.66□□□□□ -1.82
USB1Q9BQ65 AL022718.1-201ENST00000412004 84 ntBASIC3.66□□□□□ -1.82
USB1Q9BQ65 AL512326.2-201ENST00000426359 151 ntBASIC3.66□□□□□ -1.82
USB1Q9BQ65 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.66□□□□□ -1.82
USB1Q9BQ65 TRBV12-1-201ENST00000479785 344 ntBASIC3.66□□□□□ -1.82
USB1Q9BQ65 RN7SL636P-201ENST00000497504 294 ntBASIC3.66□□□□□ -1.82
USB1Q9BQ65 RNA5SP315-201ENST00000516340 116 ntBASIC3.66□□□□□ -1.82
USB1Q9BQ65 RNA5SP312-201ENST00000517068 116 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms