Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC4.2□□□□□ -1.74
MS4A3Q96HJ5 RNU6-709P-201ENST00000517257 104 ntBASIC4.2□□□□□ -1.74
MS4A3Q96HJ5 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.2□□□□□ -1.74
MS4A3Q96HJ5 MIR3667-201ENST00000581025 74 ntBASIC4.2□□□□□ -1.74
MS4A3Q96HJ5 MIR4480-201ENST00000582492 71 ntBASIC4.2□□□□□ -1.74
MS4A3Q96HJ5 FAM27B-201ENST00000610601 213 ntBASIC4.2□□□□□ -1.74
MS4A3Q96HJ5 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
MS4A3Q96HJ5 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
MS4A3Q96HJ5 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
MS4A3Q96HJ5 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
MS4A3Q96HJ5 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.2□□□□□ -1.74
MS4A3Q96HJ5 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
MS4A3Q96HJ5 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
MS4A3Q96HJ5 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.19□□□□□ -1.74
MS4A3Q96HJ5 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC4.19□□□□□ -1.74
MS4A3Q96HJ5 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
MS4A3Q96HJ5 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
MS4A3Q96HJ5 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.19□□□□□ -1.74
MS4A3Q96HJ5 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
MS4A3Q96HJ5 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
MS4A3Q96HJ5 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
MS4A3Q96HJ5 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.19□□□□□ -1.74
MS4A3Q96HJ5 Y_RNA.99-201ENST00000363138 105 ntBASIC4.19□□□□□ -1.74
MS4A3Q96HJ5 RNY1P2-201ENST00000364820 117 ntBASIC4.19□□□□□ -1.74
MS4A3Q96HJ5 RNU6-132P-201ENST00000383863 107 ntBASIC4.19□□□□□ -1.74
MS4A3Q96HJ5 HDGFP1-201ENST00000405943 252 ntBASIC4.19□□□□□ -1.74
MS4A3Q96HJ5 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.19□□□□□ -1.74
MS4A3Q96HJ5 MIR548AR-201ENST00000582191 57 ntBASIC4.19□□□□□ -1.74
MS4A3Q96HJ5 AC022726.1-201ENST00000587475 207 ntBASIC4.19□□□□□ -1.74
MS4A3Q96HJ5 AL121932.1-201ENST00000605542 214 ntBASIC4.19□□□□□ -1.74
MS4A3Q96HJ5 AC140113.4-201ENST00000622087 222 ntBASIC4.19□□□□□ -1.74
MS4A3Q96HJ5 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC4.19□□□□□ -1.74
MS4A3Q96HJ5 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
MS4A3Q96HJ5 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.19□□□□□ -1.74
MS4A3Q96HJ5 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.18□□□□□ -1.74
MS4A3Q96HJ5 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
MS4A3Q96HJ5 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
MS4A3Q96HJ5 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
MS4A3Q96HJ5 AP000542.2-201ENST00000623199 6179 ntBASIC4.18□□□□□ -1.74
MS4A3Q96HJ5 RNU6-681P-201ENST00000364012 104 ntBASIC4.18□□□□□ -1.74
MS4A3Q96HJ5 RNU6-1067P-201ENST00000384752 107 ntBASIC4.18□□□□□ -1.74
MS4A3Q96HJ5 RNA5SP372-201ENST00000390836 115 ntBASIC4.18□□□□□ -1.74
MS4A3Q96HJ5 SNORD28B-201ENST00000390993 75 ntBASIC4.18□□□□□ -1.74
MS4A3Q96HJ5 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
MS4A3Q96HJ5 RNU6-850P-201ENST00000516934 103 ntBASIC4.18□□□□□ -1.74
MS4A3Q96HJ5 AC090897.1-201ENST00000580909 226 ntBASIC4.18□□□□□ -1.74
MS4A3Q96HJ5 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
MS4A3Q96HJ5 Z97988.1-201ENST00000637697 135 ntBASIC4.18□□□□□ -1.74
MS4A3Q96HJ5 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
MS4A3Q96HJ5 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
MS4A3Q96HJ5 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.18□□□□□ -1.74
MS4A3Q96HJ5 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
MS4A3Q96HJ5 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
MS4A3Q96HJ5 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
MS4A3Q96HJ5 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
MS4A3Q96HJ5 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
MS4A3Q96HJ5 ZFRP1-201ENST00000457579 2970 ntBASIC4.17□□□□□ -1.74
MS4A3Q96HJ5 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
MS4A3Q96HJ5 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
MS4A3Q96HJ5 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
MS4A3Q96HJ5 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
MS4A3Q96HJ5 RNU6-330P-201ENST00000363015 107 ntBASIC4.17□□□□□ -1.74
MS4A3Q96HJ5 RNY1P13-201ENST00000365030 105 ntBASIC4.17□□□□□ -1.74
MS4A3Q96HJ5 RNU6-154P-201ENST00000384306 106 ntBASIC4.17□□□□□ -1.74
MS4A3Q96HJ5 MIR592-201ENST00000384959 97 ntBASIC4.17□□□□□ -1.74
MS4A3Q96HJ5 RNU1-82P-201ENST00000390851 165 ntBASIC4.17□□□□□ -1.74
MS4A3Q96HJ5 U8.16-201ENST00000391279 133 ntBASIC4.17□□□□□ -1.74
MS4A3Q96HJ5 RPL18P10-201ENST00000425606 538 ntBASIC4.17□□□□□ -1.74
MS4A3Q96HJ5 AC093850.1-201ENST00000454121 251 ntBASIC4.17□□□□□ -1.74
MS4A3Q96HJ5 AC005908.1-201ENST00000468701 347 ntBASIC4.17□□□□□ -1.74
MS4A3Q96HJ5 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.17□□□□□ -1.74
MS4A3Q96HJ5 MIR4737-201ENST00000583979 81 ntBASIC4.17□□□□□ -1.74
MS4A3Q96HJ5 AC006111.3-201ENST00000622137 383 ntBASIC4.17□□□□□ -1.74
MS4A3Q96HJ5 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
MS4A3Q96HJ5 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
MS4A3Q96HJ5 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.17□□□□□ -1.74
MS4A3Q96HJ5 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
MS4A3Q96HJ5 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
MS4A3Q96HJ5 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.17□□□□□ -1.74
MS4A3Q96HJ5 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.16□□□□□ -1.74
MS4A3Q96HJ5 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
MS4A3Q96HJ5 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.16□□□□□ -1.74
MS4A3Q96HJ5 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
MS4A3Q96HJ5 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.16□□□□□ -1.74
MS4A3Q96HJ5 HSPE1P26-201ENST00000405341 275 ntBASIC4.16□□□□□ -1.74
MS4A3Q96HJ5 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.16□□□□□ -1.74
MS4A3Q96HJ5 AC006466.1-201ENST00000438721 289 ntBASIC4.16□□□□□ -1.74
MS4A3Q96HJ5 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.16□□□□□ -1.74
MS4A3Q96HJ5 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.16□□□□□ -1.74
MS4A3Q96HJ5 MIR5699-201ENST00000578903 90 ntBASIC4.16□□□□□ -1.74
MS4A3Q96HJ5 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
MS4A3Q96HJ5 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
MS4A3Q96HJ5 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.16□□□□□ -1.74
MS4A3Q96HJ5 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
MS4A3Q96HJ5 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
MS4A3Q96HJ5 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.15□□□□□ -1.74
MS4A3Q96HJ5 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
MS4A3Q96HJ5 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.15□□□□□ -1.75
MS4A3Q96HJ5 RNU6-283P-201ENST00000364788 107 ntBASIC4.15□□□□□ -1.75
MS4A3Q96HJ5 RNU6-571P-201ENST00000384128 107 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms