Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 MTCO1P44-201ENST00000441935 243 ntBASIC3.06□□□□□ -1.92
BRF1Q92994 AL357134.1-201ENST00000445848 426 ntBASIC3.06□□□□□ -1.92
BRF1Q92994 SNORD109B-201ENST00000458961 67 ntBASIC3.06□□□□□ -1.92
BRF1Q92994 SNORD109A-201ENST00000459128 67 ntBASIC3.06□□□□□ -1.92
BRF1Q92994 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.06□□□□□ -1.92
BRF1Q92994 AC093259.1-201ENST00000509755 300 ntBASIC3.06□□□□□ -1.92
BRF1Q92994 AC127455.1-201ENST00000565496 145 ntBASIC3.06□□□□□ -1.92
BRF1Q92994 Y_RNA.778-201ENST00000620203 90 ntBASIC3.06□□□□□ -1.92
BRF1Q92994 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.06□□□□□ -1.92
BRF1Q92994 AL356292.1-201ENST00000283110 373 ntBASIC3.05□□□□□ -1.92
BRF1Q92994 Y_RNA.215-201ENST00000364204 112 ntBASIC3.05□□□□□ -1.92
BRF1Q92994 Y_RNA.332-201ENST00000365271 113 ntBASIC3.05□□□□□ -1.92
BRF1Q92994 RNU6-117P-201ENST00000365415 107 ntBASIC3.05□□□□□ -1.92
BRF1Q92994 Y_RNA.488-201ENST00000384403 102 ntBASIC3.05□□□□□ -1.92
BRF1Q92994 RNU2-48P-201ENST00000410694 191 ntBASIC3.05□□□□□ -1.92
BRF1Q92994 RPL39P40-201ENST00000445481 146 ntBASIC3.05□□□□□ -1.92
BRF1Q92994 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.05□□□□□ -1.92
BRF1Q92994 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.05□□□□□ -1.92
BRF1Q92994 CKS1BP2-201ENST00000497342 240 ntBASIC3.05□□□□□ -1.92
BRF1Q92994 AC107027.2-201ENST00000512197 115 ntBASIC3.05□□□□□ -1.92
BRF1Q92994 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.05□□□□□ -1.92
BRF1Q92994 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC3.05□□□□□ -1.92
BRF1Q92994 PRELID2P1-201ENST00000552837 301 ntBASIC3.05□□□□□ -1.92
BRF1Q92994 POLR3GP1-201ENST00000594073 261 ntBASIC3.05□□□□□ -1.92
BRF1Q92994 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.05□□□□□ -1.92
BRF1Q92994 AC013412.1-201ENST00000610687 192 ntBASIC3.05□□□□□ -1.92
BRF1Q92994 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.05□□□□□ -1.92
BRF1Q92994 CENPCP1-201ENST00000533085 2578 ntBASIC3.04□□□□□ -1.92
BRF1Q92994 Y_RNA.291-201ENST00000364886 113 ntBASIC3.04□□□□□ -1.92
BRF1Q92994 RNY3P5-201ENST00000384127 102 ntBASIC3.04□□□□□ -1.92
BRF1Q92994 Y_RNA.568-201ENST00000384742 113 ntBASIC3.04□□□□□ -1.92
BRF1Q92994 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
BRF1Q92994 AL135786.1-201ENST00000415892 214 ntBASIC3.04□□□□□ -1.92
BRF1Q92994 AC123900.1-201ENST00000420390 96 ntBASIC3.04□□□□□ -1.92
BRF1Q92994 AL137159.1-201ENST00000452808 512 ntBASIC3.04□□□□□ -1.92
BRF1Q92994 AC245047.8-201ENST00000456455 284 ntBASIC3.04□□□□□ -1.92
BRF1Q92994 RNA5SP282-201ENST00000516355 108 ntBASIC3.04□□□□□ -1.92
BRF1Q92994 SNORD116-25-201ENST00000516517 92 ntBASIC3.04□□□□□ -1.92
BRF1Q92994 RNU6-1007P-201ENST00000516586 107 ntBASIC3.04□□□□□ -1.92
BRF1Q92994 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.04□□□□□ -1.92
BRF1Q92994 AC090616.3-201ENST00000582184 217 ntBASIC3.04□□□□□ -1.92
BRF1Q92994 MIR7106-201ENST00000612419 65 ntBASIC3.04□□□□□ -1.92
BRF1Q92994 AC012640.5-201ENST00000623897 319 ntBASIC3.04□□□□□ -1.92
BRF1Q92994 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.04□□□□□ -1.92
BRF1Q92994 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
BRF1Q92994 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
BRF1Q92994 RNU6-859P-201ENST00000362728 107 ntBASIC3.03□□□□□ -1.92
BRF1Q92994 RNU1-23P-201ENST00000363361 144 ntBASIC3.03□□□□□ -1.92
BRF1Q92994 RNU6-674P-201ENST00000363831 107 ntBASIC3.03□□□□□ -1.92
BRF1Q92994 MIR561-201ENST00000385216 97 ntBASIC3.03□□□□□ -1.92
BRF1Q92994 AC003685.2-201ENST00000422795 395 ntBASIC3.03□□□□□ -1.92
BRF1Q92994 AL162725.1-201ENST00000435405 301 ntBASIC3.03□□□□□ -1.92
BRF1Q92994 RPL23AP58-201ENST00000440453 469 ntBASIC3.03□□□□□ -1.92
BRF1Q92994 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.03□□□□□ -1.92
BRF1Q92994 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
BRF1Q92994 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
BRF1Q92994 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
BRF1Q92994 RNU6-151P-201ENST00000364158 107 ntBASIC3.02□□□□□ -1.93
BRF1Q92994 RNU6-461P-201ENST00000364195 107 ntBASIC3.02□□□□□ -1.93
BRF1Q92994 Y_RNA.497-201ENST00000384447 98 ntBASIC3.02□□□□□ -1.93
BRF1Q92994 MT-TT-201ENST00000387460 66 ntBASIC3.02□□□□□ -1.93
BRF1Q92994 RNU6-220P-201ENST00000390919 107 ntBASIC3.02□□□□□ -1.93
BRF1Q92994 RNU6-131P-201ENST00000391144 107 ntBASIC3.02□□□□□ -1.93
BRF1Q92994 MIR887-201ENST00000401258 79 ntBASIC3.02□□□□□ -1.93
BRF1Q92994 AL606845.1-201ENST00000404881 255 ntBASIC3.02□□□□□ -1.93
BRF1Q92994 MIR1278-201ENST00000408753 81 ntBASIC3.02□□□□□ -1.93
BRF1Q92994 AP001486.1-201ENST00000463339 476 ntBASIC3.02□□□□□ -1.93
BRF1Q92994 AC096725.1-201ENST00000514266 313 ntBASIC3.02□□□□□ -1.93
BRF1Q92994 MIR4319-201ENST00000577285 85 ntBASIC3.02□□□□□ -1.93
BRF1Q92994 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
BRF1Q92994 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
BRF1Q92994 AC138915.1-201ENST00000565427 1685 ntBASIC3.01□□□□□ -1.93
BRF1Q92994 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
BRF1Q92994 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
BRF1Q92994 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
BRF1Q92994 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.01□□□□□ -1.93
BRF1Q92994 RNA5SP496-201ENST00000391240 109 ntBASIC3.01□□□□□ -1.93
BRF1Q92994 RNU6-383P-201ENST00000410864 94 ntBASIC3.01□□□□□ -1.93
BRF1Q92994 AC104332.2-201ENST00000429959 156 ntBASIC3.01□□□□□ -1.93
BRF1Q92994 AC108938.1-201ENST00000451204 136 ntBASIC3.01□□□□□ -1.93
BRF1Q92994 RNA5SP356-201ENST00000515972 94 ntBASIC3.01□□□□□ -1.93
BRF1Q92994 RNU6-856P-201ENST00000516959 98 ntBASIC3.01□□□□□ -1.93
BRF1Q92994 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.01□□□□□ -1.93
BRF1Q92994 AC027419.1-201ENST00000522976 328 ntBASIC3.01□□□□□ -1.93
BRF1Q92994 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.01□□□□□ -1.93
BRF1Q92994 AC015720.1-201ENST00000565251 277 ntBASIC3.01□□□□□ -1.93
BRF1Q92994 DNAJC19P2-201ENST00000593340 302 ntBASIC3.01□□□□□ -1.93
BRF1Q92994 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.01□□□□□ -1.93
BRF1Q92994 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
BRF1Q92994 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.01□□□□□ -1.93
BRF1Q92994 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3□□□□□ -1.93
BRF1Q92994 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3□□□□□ -1.93
BRF1Q92994 Y_RNA.337-201ENST00000365312 102 ntBASIC3□□□□□ -1.93
BRF1Q92994 RNU6-728P-201ENST00000365375 104 ntBASIC3□□□□□ -1.93
BRF1Q92994 MIR569-201ENST00000385228 96 ntBASIC3□□□□□ -1.93
BRF1Q92994 RNA5SP511-201ENST00000410487 115 ntBASIC3□□□□□ -1.93
BRF1Q92994 RNU4-43P-201ENST00000410628 137 ntBASIC3□□□□□ -1.93
BRF1Q92994 AL121914.1-201ENST00000450188 156 ntBASIC3□□□□□ -1.93
BRF1Q92994 RNU6-437P-201ENST00000459408 95 ntBASIC3□□□□□ -1.93
BRF1Q92994 AC010409.1-201ENST00000487382 476 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms