Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.95□□□□□ -1.78
SCUBE3Q8IX30 Y_RNA.351-201ENST00000365436 96 ntBASIC3.95□□□□□ -1.78
SCUBE3Q8IX30 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
SCUBE3Q8IX30 AL138878.1-201ENST00000405131 347 ntBASIC3.95□□□□□ -1.78
SCUBE3Q8IX30 RNU7-80P-201ENST00000459562 61 ntBASIC3.95□□□□□ -1.78
SCUBE3Q8IX30 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.95□□□□□ -1.78
SCUBE3Q8IX30 RNU6-162P-201ENST00000516228 103 ntBASIC3.95□□□□□ -1.78
SCUBE3Q8IX30 RNU1-95P-201ENST00000516357 160 ntBASIC3.95□□□□□ -1.78
SCUBE3Q8IX30 RNU7-25P-201ENST00000516544 62 ntBASIC3.95□□□□□ -1.78
SCUBE3Q8IX30 MIR2114-201ENST00000516645 80 ntBASIC3.95□□□□□ -1.78
SCUBE3Q8IX30 RNU1-128P-201ENST00000516704 160 ntBASIC3.95□□□□□ -1.78
SCUBE3Q8IX30 DLEU2_5.2-201ENST00000610606 84 ntBASIC3.95□□□□□ -1.78
SCUBE3Q8IX30 MIR6079-201ENST00000635807 62 ntBASIC3.95□□□□□ -1.78
SCUBE3Q8IX30 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.95□□□□□ -1.78
SCUBE3Q8IX30 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
SCUBE3Q8IX30 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
SCUBE3Q8IX30 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SCUBE3Q8IX30 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SCUBE3Q8IX30 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.94□□□□□ -1.78
SCUBE3Q8IX30 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
SCUBE3Q8IX30 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SCUBE3Q8IX30 RNU1-105P-201ENST00000363470 161 ntBASIC3.94□□□□□ -1.78
SCUBE3Q8IX30 Y_RNA.440-201ENST00000384120 114 ntBASIC3.94□□□□□ -1.78
SCUBE3Q8IX30 U8.11-201ENST00000384699 133 ntBASIC3.94□□□□□ -1.78
SCUBE3Q8IX30 AC123900.1-201ENST00000420390 96 ntBASIC3.94□□□□□ -1.78
SCUBE3Q8IX30 AC060773.1-201ENST00000421698 310 ntBASIC3.94□□□□□ -1.78
SCUBE3Q8IX30 AC004941.2-201ENST00000427009 228 ntBASIC3.94□□□□□ -1.78
SCUBE3Q8IX30 U8.18-201ENST00000459285 133 ntBASIC3.94□□□□□ -1.78
SCUBE3Q8IX30 SNORD36C-201ENST00000516733 66 ntBASIC3.94□□□□□ -1.78
SCUBE3Q8IX30 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.94□□□□□ -1.78
SCUBE3Q8IX30 MIR4694-201ENST00000578534 80 ntBASIC3.94□□□□□ -1.78
SCUBE3Q8IX30 MIR5187-201ENST00000583479 76 ntBASIC3.94□□□□□ -1.78
SCUBE3Q8IX30 AC020914.4-201ENST00000597690 277 ntBASIC3.94□□□□□ -1.78
SCUBE3Q8IX30 AC012531.4-201ENST00000616509 177 ntBASIC3.94□□□□□ -1.78
SCUBE3Q8IX30 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SCUBE3Q8IX30 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.94□□□□□ -1.78
SCUBE3Q8IX30 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SCUBE3Q8IX30 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
SCUBE3Q8IX30 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.93□□□□□ -1.78
SCUBE3Q8IX30 RNU6-170P-201ENST00000362832 104 ntBASIC3.93□□□□□ -1.78
SCUBE3Q8IX30 RNU1-72P-201ENST00000362976 153 ntBASIC3.93□□□□□ -1.78
SCUBE3Q8IX30 RNU6-675P-201ENST00000384236 104 ntBASIC3.93□□□□□ -1.78
SCUBE3Q8IX30 Y_RNA.547-201ENST00000384654 119 ntBASIC3.93□□□□□ -1.78
SCUBE3Q8IX30 MIR767-201ENST00000390228 109 ntBASIC3.93□□□□□ -1.78
SCUBE3Q8IX30 RNA5SP424-201ENST00000390988 115 ntBASIC3.93□□□□□ -1.78
SCUBE3Q8IX30 RNU2-37P-201ENST00000410695 177 ntBASIC3.93□□□□□ -1.78
SCUBE3Q8IX30 RNU6-938P-201ENST00000411285 103 ntBASIC3.93□□□□□ -1.78
SCUBE3Q8IX30 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.93□□□□□ -1.78
SCUBE3Q8IX30 AC113410.1-201ENST00000505029 247 ntBASIC3.93□□□□□ -1.78
SCUBE3Q8IX30 AC093259.1-201ENST00000509755 300 ntBASIC3.93□□□□□ -1.78
SCUBE3Q8IX30 RNU6-795P-201ENST00000516323 103 ntBASIC3.93□□□□□ -1.78
SCUBE3Q8IX30 RNU7-128P-201ENST00000517247 62 ntBASIC3.93□□□□□ -1.78
SCUBE3Q8IX30 AC087741.2-201ENST00000619415 172 ntBASIC3.93□□□□□ -1.78
SCUBE3Q8IX30 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SCUBE3Q8IX30 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SCUBE3Q8IX30 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SCUBE3Q8IX30 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
SCUBE3Q8IX30 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.92□□□□□ -1.78
SCUBE3Q8IX30 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SCUBE3Q8IX30 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
SCUBE3Q8IX30 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SCUBE3Q8IX30 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SCUBE3Q8IX30 RNU6-832P-201ENST00000363319 107 ntBASIC3.92□□□□□ -1.78
SCUBE3Q8IX30 RNU6-979P-201ENST00000383896 107 ntBASIC3.92□□□□□ -1.78
SCUBE3Q8IX30 RNU6-442P-201ENST00000383968 104 ntBASIC3.92□□□□□ -1.78
SCUBE3Q8IX30 SNORA5A-201ENST00000384111 134 ntBASIC3.92□□□□□ -1.78
SCUBE3Q8IX30 Y_RNA.454-201ENST00000384224 113 ntBASIC3.92□□□□□ -1.78
SCUBE3Q8IX30 AC244505.4-201ENST00000434905 287 ntBASIC3.92□□□□□ -1.78
SCUBE3Q8IX30 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.92□□□□□ -1.78
SCUBE3Q8IX30 SSXP5-201ENST00000443473 287 ntBASIC3.92□□□□□ -1.78
SCUBE3Q8IX30 AL049830.1-201ENST00000468034 425 ntBASIC3.92□□□□□ -1.78
SCUBE3Q8IX30 AC106707.2-201ENST00000484182 374 ntBASIC3.92□□□□□ -1.78
SCUBE3Q8IX30 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.92□□□□□ -1.78
SCUBE3Q8IX30 SNORA70.14-201ENST00000516205 110 ntBASIC3.92□□□□□ -1.78
SCUBE3Q8IX30 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.92□□□□□ -1.78
SCUBE3Q8IX30 AC244505.7-201ENST00000599675 272 ntBASIC3.92□□□□□ -1.78
SCUBE3Q8IX30 AC006111.3-201ENST00000622137 383 ntBASIC3.92□□□□□ -1.78
SCUBE3Q8IX30 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.92□□□□□ -1.78
SCUBE3Q8IX30 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SCUBE3Q8IX30 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.92□□□□□ -1.78
SCUBE3Q8IX30 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.91□□□□□ -1.78
SCUBE3Q8IX30 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.91□□□□□ -1.78
SCUBE3Q8IX30 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SCUBE3Q8IX30 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
SCUBE3Q8IX30 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
SCUBE3Q8IX30 RNU6-1125P-201ENST00000363601 107 ntBASIC3.91□□□□□ -1.78
SCUBE3Q8IX30 Y_RNA.155-201ENST00000363632 101 ntBASIC3.91□□□□□ -1.78
SCUBE3Q8IX30 RNU6-1083P-201ENST00000384022 107 ntBASIC3.91□□□□□ -1.78
SCUBE3Q8IX30 SNORD116-22-201ENST00000384430 92 ntBASIC3.91□□□□□ -1.78
SCUBE3Q8IX30 MIR183-201ENST00000384958 110 ntBASIC3.91□□□□□ -1.78
SCUBE3Q8IX30 AL445646.1-201ENST00000431784 216 ntBASIC3.91□□□□□ -1.78
SCUBE3Q8IX30 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.91□□□□□ -1.78
SCUBE3Q8IX30 SNORA18.7-201ENST00000516910 131 ntBASIC3.91□□□□□ -1.78
SCUBE3Q8IX30 AC008011.1-201ENST00000545989 227 ntBASIC3.91□□□□□ -1.78
SCUBE3Q8IX30 MIR4666B-201ENST00000578142 81 ntBASIC3.91□□□□□ -1.78
SCUBE3Q8IX30 MIR5588-201ENST00000581890 63 ntBASIC3.91□□□□□ -1.78
SCUBE3Q8IX30 FAS-AS1.2-201ENST00000620386 170 ntBASIC3.91□□□□□ -1.78
SCUBE3Q8IX30 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.91□□□□□ -1.78
SCUBE3Q8IX30 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SCUBE3Q8IX30 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms