Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
HERC6Q8IVU3 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
HERC6Q8IVU3 Y_RNA.214-201ENST00000364201 112 ntBASIC2.1□□□□□ -2.07
HERC6Q8IVU3 RNU4-50P-201ENST00000364361 141 ntBASIC2.1□□□□□ -2.07
HERC6Q8IVU3 RNA5SP138-201ENST00000365098 114 ntBASIC2.1□□□□□ -2.07
HERC6Q8IVU3 Y_RNA.380-201ENST00000365663 111 ntBASIC2.1□□□□□ -2.07
HERC6Q8IVU3 RNU6-417P-201ENST00000384712 107 ntBASIC2.1□□□□□ -2.07
HERC6Q8IVU3 MIR568-201ENST00000385036 95 ntBASIC2.1□□□□□ -2.07
HERC6Q8IVU3 ELOCP20-201ENST00000422460 345 ntBASIC2.1□□□□□ -2.07
HERC6Q8IVU3 AC010154.1-201ENST00000425857 269 ntBASIC2.1□□□□□ -2.07
HERC6Q8IVU3 AC003989.2-201ENST00000440224 169 ntBASIC2.1□□□□□ -2.07
HERC6Q8IVU3 RPEP5-201ENST00000441137 268 ntBASIC2.1□□□□□ -2.07
HERC6Q8IVU3 RPL23AP7-203ENST00000449021 469 ntBASIC2.1□□□□□ -2.07
HERC6Q8IVU3 SNORA25.15-201ENST00000516487 89 ntBASIC2.1□□□□□ -2.07
HERC6Q8IVU3 RNU1-142P-201ENST00000516682 145 ntBASIC2.1□□□□□ -2.07
HERC6Q8IVU3 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.1□□□□□ -2.07
HERC6Q8IVU3 AL117187.1-201ENST00000555482 181 ntBASIC2.1□□□□□ -2.07
HERC6Q8IVU3 MIR5089-201ENST00000580047 84 ntBASIC2.1□□□□□ -2.07
HERC6Q8IVU3 AL109918.3-201ENST00000603072 338 ntBASIC2.1□□□□□ -2.07
HERC6Q8IVU3 AL162730.1-201ENST00000605734 292 ntBASIC2.1□□□□□ -2.07
HERC6Q8IVU3 AL627230.6-201ENST00000611129 280 ntBASIC2.1□□□□□ -2.07
HERC6Q8IVU3 AC240442.1-201ENST00000616055 283 ntBASIC2.1□□□□□ -2.07
HERC6Q8IVU3 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.1□□□□□ -2.07
HERC6Q8IVU3 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.1□□□□□ -2.07
HERC6Q8IVU3 Y_RNA.26-201ENST00000362539 101 ntBASIC2.09□□□□□ -2.07
HERC6Q8IVU3 Y_RNA.269-201ENST00000364685 89 ntBASIC2.09□□□□□ -2.07
HERC6Q8IVU3 Y_RNA.471-201ENST00000384312 102 ntBASIC2.09□□□□□ -2.07
HERC6Q8IVU3 RNU2-7P-201ENST00000410794 178 ntBASIC2.09□□□□□ -2.07
HERC6Q8IVU3 RNU6-397P-201ENST00000516226 104 ntBASIC2.09□□□□□ -2.07
HERC6Q8IVU3 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.09□□□□□ -2.07
HERC6Q8IVU3 RNU6-897P-201ENST00000517135 105 ntBASIC2.09□□□□□ -2.07
HERC6Q8IVU3 AC131281.1-201ENST00000522984 164 ntBASIC2.09□□□□□ -2.07
HERC6Q8IVU3 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.09□□□□□ -2.07
HERC6Q8IVU3 SNRPGP19-201ENST00000603826 189 ntBASIC2.09□□□□□ -2.07
HERC6Q8IVU3 AL355297.3-201ENST00000604082 446 ntBASIC2.09□□□□□ -2.07
HERC6Q8IVU3 AL121655.1-201ENST00000605811 308 ntBASIC2.09□□□□□ -2.07
HERC6Q8IVU3 AL359075.3-201ENST00000613288 217 ntBASIC2.09□□□□□ -2.07
HERC6Q8IVU3 AC010205.1-201ENST00000616668 449 ntBASIC2.09□□□□□ -2.07
HERC6Q8IVU3 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
HERC6Q8IVU3 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
HERC6Q8IVU3 AC010615.1-201ENST00000594254 1764 ntBASIC2.08□□□□□ -2.08
HERC6Q8IVU3 RNU6-661P-201ENST00000362409 107 ntBASIC2.08□□□□□ -2.08
HERC6Q8IVU3 Y_RNA.105-201ENST00000363182 111 ntBASIC2.08□□□□□ -2.08
HERC6Q8IVU3 RNU6-1309P-201ENST00000363305 108 ntBASIC2.08□□□□□ -2.08
HERC6Q8IVU3 RNU6-271P-201ENST00000363858 105 ntBASIC2.08□□□□□ -2.08
HERC6Q8IVU3 Y_RNA.210-201ENST00000364161 110 ntBASIC2.08□□□□□ -2.08
HERC6Q8IVU3 RNU6-806P-201ENST00000365147 105 ntBASIC2.08□□□□□ -2.08
HERC6Q8IVU3 Y_RNA.508-201ENST00000384502 114 ntBASIC2.08□□□□□ -2.08
HERC6Q8IVU3 Y_RNA.512-201ENST00000384518 102 ntBASIC2.08□□□□□ -2.08
HERC6Q8IVU3 MIR520A-201ENST00000384862 85 ntBASIC2.08□□□□□ -2.08
HERC6Q8IVU3 RPL21P1-201ENST00000399532 476 ntBASIC2.08□□□□□ -2.08
HERC6Q8IVU3 AL117342.1-201ENST00000404861 406 ntBASIC2.08□□□□□ -2.08
HERC6Q8IVU3 U3.40-201ENST00000408706 208 ntBASIC2.08□□□□□ -2.08
HERC6Q8IVU3 AL021397.1-201ENST00000451806 248 ntBASIC2.08□□□□□ -2.08
HERC6Q8IVU3 SNORD65B-201ENST00000459126 73 ntBASIC2.08□□□□□ -2.08
HERC6Q8IVU3 RPL26P26-201ENST00000480251 434 ntBASIC2.08□□□□□ -2.08
HERC6Q8IVU3 MRPS17P9-201ENST00000511924 393 ntBASIC2.08□□□□□ -2.08
HERC6Q8IVU3 RNU1-40P-201ENST00000516816 164 ntBASIC2.08□□□□□ -2.08
HERC6Q8IVU3 RNU1-97P-201ENST00000516872 164 ntBASIC2.08□□□□□ -2.08
HERC6Q8IVU3 SUB1P4-201ENST00000566062 339 ntBASIC2.08□□□□□ -2.08
HERC6Q8IVU3 MIR4299-201ENST00000577899 72 ntBASIC2.08□□□□□ -2.08
HERC6Q8IVU3 AC002984.1-201ENST00000591692 448 ntBASIC2.08□□□□□ -2.08
HERC6Q8IVU3 AC005176.2-201ENST00000596933 147 ntBASIC2.08□□□□□ -2.08
HERC6Q8IVU3 AC008749.1-201ENST00000597650 306 ntBASIC2.08□□□□□ -2.08
HERC6Q8IVU3 AL390123.1-201ENST00000603216 237 ntBASIC2.08□□□□□ -2.08
HERC6Q8IVU3 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.08□□□□□ -2.08
HERC6Q8IVU3 AC022513.1-201ENST00000624512 117 ntBASIC2.08□□□□□ -2.08
HERC6Q8IVU3 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.08□□□□□ -2.08
HERC6Q8IVU3 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
HERC6Q8IVU3 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.07□□□□□ -2.08
HERC6Q8IVU3 Y_RNA.118-201ENST00000363300 101 ntBASIC2.07□□□□□ -2.08
HERC6Q8IVU3 RNU6-961P-201ENST00000363893 105 ntBASIC2.07□□□□□ -2.08
HERC6Q8IVU3 Y_RNA.222-201ENST00000364264 102 ntBASIC2.07□□□□□ -2.08
HERC6Q8IVU3 Y_RNA.230-201ENST00000364348 109 ntBASIC2.07□□□□□ -2.08
HERC6Q8IVU3 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.07□□□□□ -2.08
HERC6Q8IVU3 RNU6-1109P-201ENST00000391187 107 ntBASIC2.07□□□□□ -2.08
HERC6Q8IVU3 AL627390.1-201ENST00000396055 340 ntBASIC2.07□□□□□ -2.08
HERC6Q8IVU3 AC016909.1-201ENST00000415916 166 ntBASIC2.07□□□□□ -2.08
HERC6Q8IVU3 AL390729.2-201ENST00000416137 156 ntBASIC2.07□□□□□ -2.08
HERC6Q8IVU3 AC099677.2-201ENST00000436385 175 ntBASIC2.07□□□□□ -2.08
HERC6Q8IVU3 MTND3P2-201ENST00000438452 342 ntBASIC2.07□□□□□ -2.08
HERC6Q8IVU3 AC073910.1-201ENST00000445047 438 ntBASIC2.07□□□□□ -2.08
HERC6Q8IVU3 AC025033.1-201ENST00000463883 194 ntBASIC2.07□□□□□ -2.08
HERC6Q8IVU3 AC005840.1-201ENST00000498412 377 ntBASIC2.07□□□□□ -2.08
HERC6Q8IVU3 MRPS35P2-201ENST00000508242 191 ntBASIC2.07□□□□□ -2.08
HERC6Q8IVU3 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
HERC6Q8IVU3 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.07□□□□□ -2.08
HERC6Q8IVU3 AC008269.2-201ENST00000561915 1105 ntBASIC2.07□□□□□ -2.08
HERC6Q8IVU3 AL359821.1-201ENST00000605519 182 ntBASIC2.07□□□□□ -2.08
HERC6Q8IVU3 AC004467.1-201ENST00000615678 330 ntBASIC2.07□□□□□ -2.08
HERC6Q8IVU3 MIR8070-201ENST00000616510 88 ntBASIC2.07□□□□□ -2.08
HERC6Q8IVU3 CENPCP1-201ENST00000533085 2578 ntBASIC2.07□□□□□ -2.08
HERC6Q8IVU3 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
HERC6Q8IVU3 RNY1P10-201ENST00000363268 113 ntBASIC2.06□□□□□ -2.08
HERC6Q8IVU3 RNU6-626P-201ENST00000363354 107 ntBASIC2.06□□□□□ -2.08
HERC6Q8IVU3 Y_RNA.287-201ENST00000364853 94 ntBASIC2.06□□□□□ -2.08
HERC6Q8IVU3 RNA5SP160-201ENST00000364866 120 ntBASIC2.06□□□□□ -2.08
HERC6Q8IVU3 SNORA63.7-201ENST00000365579 123 ntBASIC2.06□□□□□ -2.08
HERC6Q8IVU3 MIR499A-201ENST00000384903 122 ntBASIC2.06□□□□□ -2.08
HERC6Q8IVU3 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms