Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 Y_RNA.486-201ENST00000384398 107 ntBASIC3.62□□□□□ -1.83
TRIM50Q86XT4 RNU6-429P-201ENST00000384582 108 ntBASIC3.62□□□□□ -1.83
TRIM50Q86XT4 RNU6-476P-201ENST00000384726 107 ntBASIC3.62□□□□□ -1.83
TRIM50Q86XT4 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
TRIM50Q86XT4 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
TRIM50Q86XT4 RNU4-47P-201ENST00000410876 114 ntBASIC3.62□□□□□ -1.83
TRIM50Q86XT4 RPL23AP67-201ENST00000465341 474 ntBASIC3.62□□□□□ -1.83
TRIM50Q86XT4 MTND5P34-201ENST00000568888 325 ntBASIC3.62□□□□□ -1.83
TRIM50Q86XT4 MIR2682-201ENST00000580305 110 ntBASIC3.62□□□□□ -1.83
TRIM50Q86XT4 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.62□□□□□ -1.83
TRIM50Q86XT4 MIR7153-201ENST00000637758 57 ntBASIC3.62□□□□□ -1.83
TRIM50Q86XT4 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
TRIM50Q86XT4 AC093908.1-201ENST00000623125 8092 ntBASIC3.62□□□□□ -1.83
TRIM50Q86XT4 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TRIM50Q86XT4 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
TRIM50Q86XT4 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
TRIM50Q86XT4 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
TRIM50Q86XT4 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
TRIM50Q86XT4 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
TRIM50Q86XT4 snoU2-30.2-201ENST00000362805 70 ntBASIC3.61□□□□□ -1.83
TRIM50Q86XT4 MIR592-201ENST00000384959 97 ntBASIC3.61□□□□□ -1.83
TRIM50Q86XT4 MIR561-201ENST00000385216 97 ntBASIC3.61□□□□□ -1.83
TRIM50Q86XT4 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC3.61□□□□□ -1.83
TRIM50Q86XT4 RPS15AP28-201ENST00000435088 386 ntBASIC3.61□□□□□ -1.83
TRIM50Q86XT4 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC3.61□□□□□ -1.83
TRIM50Q86XT4 RNU6-1041P-201ENST00000516254 102 ntBASIC3.61□□□□□ -1.83
TRIM50Q86XT4 MIR2276-201ENST00000516886 89 ntBASIC3.61□□□□□ -1.83
TRIM50Q86XT4 MIR4662B-201ENST00000579498 81 ntBASIC3.61□□□□□ -1.83
TRIM50Q86XT4 uc_338.1-201ENST00000612113 180 ntBASIC3.61□□□□□ -1.83
TRIM50Q86XT4 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.61□□□□□ -1.83
TRIM50Q86XT4 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TRIM50Q86XT4 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TRIM50Q86XT4 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.61□□□□□ -1.83
TRIM50Q86XT4 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
TRIM50Q86XT4 Y_RNA.114-201ENST00000363265 113 ntBASIC3.6□□□□□ -1.83
TRIM50Q86XT4 RNU1-96P-201ENST00000364163 162 ntBASIC3.6□□□□□ -1.83
TRIM50Q86XT4 RNU6-1138P-201ENST00000365359 106 ntBASIC3.6□□□□□ -1.83
TRIM50Q86XT4 RNU6-220P-201ENST00000390919 107 ntBASIC3.6□□□□□ -1.83
TRIM50Q86XT4 AL158147.1-201ENST00000443970 75 ntBASIC3.6□□□□□ -1.83
TRIM50Q86XT4 RPL39P40-201ENST00000445481 146 ntBASIC3.6□□□□□ -1.83
TRIM50Q86XT4 SNORA18.4-201ENST00000516440 124 ntBASIC3.6□□□□□ -1.83
TRIM50Q86XT4 RNU6-1061P-201ENST00000516530 99 ntBASIC3.6□□□□□ -1.83
TRIM50Q86XT4 RNU6-1291P-201ENST00000516591 104 ntBASIC3.6□□□□□ -1.83
TRIM50Q86XT4 Y_RNA.690-201ENST00000516603 95 ntBASIC3.6□□□□□ -1.83
TRIM50Q86XT4 AC007229.1-201ENST00000590455 412 ntBASIC3.6□□□□□ -1.83
TRIM50Q86XT4 SNORA50A-202ENST00000629536 136 ntBASIC3.6□□□□□ -1.83
TRIM50Q86XT4 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TRIM50Q86XT4 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TRIM50Q86XT4 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC3.6□□□□□ -1.83
TRIM50Q86XT4 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.6□□□□□ -1.83
TRIM50Q86XT4 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
TRIM50Q86XT4 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TRIM50Q86XT4 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
TRIM50Q86XT4 SNORA63.4-201ENST00000362763 126 ntBASIC3.59□□□□□ -1.83
TRIM50Q86XT4 RNU6-1144P-201ENST00000384247 104 ntBASIC3.59□□□□□ -1.83
TRIM50Q86XT4 RNA5SP467-201ENST00000391274 118 ntBASIC3.59□□□□□ -1.83
TRIM50Q86XT4 AL049873.1-201ENST00000480540 376 ntBASIC3.59□□□□□ -1.83
TRIM50Q86XT4 RNU7-99P-201ENST00000516271 62 ntBASIC3.59□□□□□ -1.83
TRIM50Q86XT4 RNU6-365P-201ENST00000517113 106 ntBASIC3.59□□□□□ -1.83
TRIM50Q86XT4 AC133485.4-201ENST00000561835 220 ntBASIC3.59□□□□□ -1.83
TRIM50Q86XT4 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.59□□□□□ -1.83
TRIM50Q86XT4 AC138907.4-201ENST00000570107 226 ntBASIC3.59□□□□□ -1.83
TRIM50Q86XT4 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.59□□□□□ -1.83
TRIM50Q86XT4 MIR3914-2-201ENST00000637339 95 ntBASIC3.59□□□□□ -1.83
TRIM50Q86XT4 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
TRIM50Q86XT4 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
TRIM50Q86XT4 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
TRIM50Q86XT4 MIR422A-201ENST00000362286 90 ntBASIC3.58□□□□□ -1.84
TRIM50Q86XT4 SNORA12.1-201ENST00000390873 148 ntBASIC3.58□□□□□ -1.84
TRIM50Q86XT4 S100A11P2-201ENST00000467589 312 ntBASIC3.58□□□□□ -1.84
TRIM50Q86XT4 NDUFA4P2-201ENST00000489989 244 ntBASIC3.58□□□□□ -1.84
TRIM50Q86XT4 RNU6-126P-201ENST00000516685 103 ntBASIC3.58□□□□□ -1.84
TRIM50Q86XT4 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.58□□□□□ -1.84
TRIM50Q86XT4 EIF4BP1-201ENST00000554881 351 ntBASIC3.58□□□□□ -1.84
TRIM50Q86XT4 MIR3121-201ENST00000579680 77 ntBASIC3.58□□□□□ -1.84
TRIM50Q86XT4 UBL5P2-201ENST00000583788 219 ntBASIC3.58□□□□□ -1.84
TRIM50Q86XT4 AC245060.5-201ENST00000610778 3293 ntBASIC3.58□□□□□ -1.84
TRIM50Q86XT4 AC017071.1-201ENST00000564407 2204 ntBASIC3.58□□□□□ -1.84
TRIM50Q86XT4 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
TRIM50Q86XT4 Y_RNA.267-201ENST00000364679 109 ntBASIC3.57□□□□□ -1.84
TRIM50Q86XT4 EDDM3CP-201ENST00000415977 425 ntBASIC3.57□□□□□ -1.84
TRIM50Q86XT4 SNRPGP10-201ENST00000432323 225 ntBASIC3.57□□□□□ -1.84
TRIM50Q86XT4 AC018868.1-201ENST00000491307 315 ntBASIC3.57□□□□□ -1.84
TRIM50Q86XT4 HMGN1P7-201ENST00000491722 313 ntBASIC3.57□□□□□ -1.84
TRIM50Q86XT4 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.57□□□□□ -1.84
TRIM50Q86XT4 RNU7-128P-201ENST00000517247 62 ntBASIC3.57□□□□□ -1.84
TRIM50Q86XT4 RNU1-104P-201ENST00000517280 175 ntBASIC3.57□□□□□ -1.84
TRIM50Q86XT4 RNU2-60P-201ENST00000517290 128 ntBASIC3.57□□□□□ -1.84
TRIM50Q86XT4 NDUFB9P3-201ENST00000521269 501 ntBASIC3.57□□□□□ -1.84
TRIM50Q86XT4 MIR4425-201ENST00000580572 84 ntBASIC3.57□□□□□ -1.84
TRIM50Q86XT4 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.57□□□□□ -1.84
TRIM50Q86XT4 AL359075.3-201ENST00000613288 217 ntBASIC3.57□□□□□ -1.84
TRIM50Q86XT4 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
TRIM50Q86XT4 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM50Q86XT4 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
TRIM50Q86XT4 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.56□□□□□ -1.84
TRIM50Q86XT4 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.56□□□□□ -1.84
TRIM50Q86XT4 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.56□□□□□ -1.84
TRIM50Q86XT4 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM50Q86XT4 RNU6-508P-201ENST00000363231 103 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 1229.9 ms