Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.59□□□□□ -1.83
RXRBP28702 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
RXRBP28702 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
RXRBP28702 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.59□□□□□ -1.83
RXRBP28702 MIR367-201ENST00000362299 68 ntBASIC3.59□□□□□ -1.83
RXRBP28702 SNORD45.3-201ENST00000363836 72 ntBASIC3.59□□□□□ -1.83
RXRBP28702 RNY3P5-201ENST00000384127 102 ntBASIC3.59□□□□□ -1.83
RXRBP28702 AC007064.1-201ENST00000412238 351 ntBASIC3.59□□□□□ -1.83
RXRBP28702 AC145146.1-201ENST00000496370 254 ntBASIC3.59□□□□□ -1.83
RXRBP28702 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.59□□□□□ -1.83
RXRBP28702 MTND5P34-201ENST00000568888 325 ntBASIC3.59□□□□□ -1.83
RXRBP28702 MIR548AY-201ENST00000617669 107 ntBASIC3.59□□□□□ -1.83
RXRBP28702 AC007496.3-201ENST00000624987 3443 ntBASIC3.58□□□□□ -1.84
RXRBP28702 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
RXRBP28702 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.58□□□□□ -1.84
RXRBP28702 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.58□□□□□ -1.84
RXRBP28702 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RXRBP28702 RNU6-748P-201ENST00000384648 107 ntBASIC3.58□□□□□ -1.84
RXRBP28702 SNORA36B-201ENST00000410438 131 ntBASIC3.58□□□□□ -1.84
RXRBP28702 Y_RNA.630-201ENST00000411370 108 ntBASIC3.58□□□□□ -1.84
RXRBP28702 AC092185.1-201ENST00000491371 97 ntBASIC3.58□□□□□ -1.84
RXRBP28702 SNORA72.7-201ENST00000516349 94 ntBASIC3.58□□□□□ -1.84
RXRBP28702 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC3.58□□□□□ -1.84
RXRBP28702 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.58□□□□□ -1.84
RXRBP28702 AC108081.1-201ENST00000604358 221 ntBASIC3.58□□□□□ -1.84
RXRBP28702 RNU6-91P-201ENST00000607774 107 ntBASIC3.58□□□□□ -1.84
RXRBP28702 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.57□□□□□ -1.84
RXRBP28702 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.57□□□□□ -1.84
RXRBP28702 RNA5SP89-201ENST00000410300 108 ntBASIC3.57□□□□□ -1.84
RXRBP28702 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.57□□□□□ -1.84
RXRBP28702 AL357134.1-201ENST00000445848 426 ntBASIC3.57□□□□□ -1.84
RXRBP28702 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.57□□□□□ -1.84
RXRBP28702 RNU5E-3P-201ENST00000515913 68 ntBASIC3.57□□□□□ -1.84
RXRBP28702 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC3.57□□□□□ -1.84
RXRBP28702 AC025281.1-201ENST00000567026 265 ntBASIC3.57□□□□□ -1.84
RXRBP28702 MIR4474-201ENST00000579189 78 ntBASIC3.57□□□□□ -1.84
RXRBP28702 AL031274.2-201ENST00000599419 203 ntBASIC3.57□□□□□ -1.84
RXRBP28702 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.57□□□□□ -1.84
RXRBP28702 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RXRBP28702 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
RXRBP28702 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RXRBP28702 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RXRBP28702 RNU6-1164P-201ENST00000364428 107 ntBASIC3.56□□□□□ -1.84
RXRBP28702 SNORA20B-201ENST00000384220 132 ntBASIC3.56□□□□□ -1.84
RXRBP28702 SNORD116-13-201ENST00000384408 92 ntBASIC3.56□□□□□ -1.84
RXRBP28702 AL355796.1-201ENST00000406706 323 ntBASIC3.56□□□□□ -1.84
RXRBP28702 Y_RNA.622-201ENST00000411091 108 ntBASIC3.56□□□□□ -1.84
RXRBP28702 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RXRBP28702 RPL23AP42-201ENST00000471152 471 ntBASIC3.56□□□□□ -1.84
RXRBP28702 SNORA31.1-201ENST00000515993 133 ntBASIC3.56□□□□□ -1.84
RXRBP28702 SNORA70.12-201ENST00000516084 153 ntBASIC3.56□□□□□ -1.84
RXRBP28702 SNORA31.5-201ENST00000516190 133 ntBASIC3.56□□□□□ -1.84
RXRBP28702 SCARNA17.1-201ENST00000516211 143 ntBASIC3.56□□□□□ -1.84
RXRBP28702 SNORD33.1-201ENST00000516213 88 ntBASIC3.56□□□□□ -1.84
RXRBP28702 SCARNA17.2-201ENST00000516334 143 ntBASIC3.56□□□□□ -1.84
RXRBP28702 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.56□□□□□ -1.84
RXRBP28702 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.56□□□□□ -1.84
RXRBP28702 AC107294.3-201ENST00000609211 526 ntBASIC3.56□□□□□ -1.84
RXRBP28702 SCARNA17.4-201ENST00000614296 143 ntBASIC3.56□□□□□ -1.84
RXRBP28702 AC006111.3-201ENST00000622137 383 ntBASIC3.56□□□□□ -1.84
RXRBP28702 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC3.56□□□□□ -1.84
RXRBP28702 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RXRBP28702 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RXRBP28702 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RXRBP28702 SNORD114-7-201ENST00000362520 77 ntBASIC3.55□□□□□ -1.84
RXRBP28702 RNU6-978P-201ENST00000364371 103 ntBASIC3.55□□□□□ -1.84
RXRBP28702 Y_RNA.309-201ENST00000365046 111 ntBASIC3.55□□□□□ -1.84
RXRBP28702 RNU6-19P-201ENST00000384718 107 ntBASIC3.55□□□□□ -1.84
RXRBP28702 Y_RNA.584-201ENST00000391090 114 ntBASIC3.55□□□□□ -1.84
RXRBP28702 RNA5SP274-201ENST00000410484 108 ntBASIC3.55□□□□□ -1.84
RXRBP28702 RNU6-1077P-201ENST00000410506 102 ntBASIC3.55□□□□□ -1.84
RXRBP28702 AL365496.1-201ENST00000426885 215 ntBASIC3.55□□□□□ -1.84
RXRBP28702 RPL23AP7-203ENST00000449021 469 ntBASIC3.55□□□□□ -1.84
RXRBP28702 AC107626.1-201ENST00000471084 183 ntBASIC3.55□□□□□ -1.84
RXRBP28702 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.55□□□□□ -1.84
RXRBP28702 AC104027.1-201ENST00000521887 300 ntBASIC3.55□□□□□ -1.84
RXRBP28702 MIR3121-201ENST00000579680 77 ntBASIC3.55□□□□□ -1.84
RXRBP28702 MIR378D2-201ENST00000580636 98 ntBASIC3.55□□□□□ -1.84
RXRBP28702 AP003357.1-201ENST00000604497 148 ntBASIC3.55□□□□□ -1.84
RXRBP28702 AC068647.2-201ENST00000637380 353 ntBASIC3.55□□□□□ -1.84
RXRBP28702 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RXRBP28702 AP003122.5-201ENST00000527668 3766 ntBASIC3.55□□□□□ -1.84
RXRBP28702 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RXRBP28702 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.54□□□□□ -1.84
RXRBP28702 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RXRBP28702 U8.1-201ENST00000362843 134 ntBASIC3.54□□□□□ -1.84
RXRBP28702 SNORA12-201ENST00000391162 147 ntBASIC3.54□□□□□ -1.84
RXRBP28702 MIR1185-2-201ENST00000408687 86 ntBASIC3.54□□□□□ -1.84
RXRBP28702 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.54□□□□□ -1.84
RXRBP28702 HSPE1P21-201ENST00000438283 308 ntBASIC3.54□□□□□ -1.84
RXRBP28702 AL158147.1-201ENST00000443970 75 ntBASIC3.54□□□□□ -1.84
RXRBP28702 AC010099.1-201ENST00000455434 375 ntBASIC3.54□□□□□ -1.84
RXRBP28702 snoU13.28-201ENST00000459235 104 ntBASIC3.54□□□□□ -1.84
RXRBP28702 RN7SL636P-201ENST00000497504 294 ntBASIC3.54□□□□□ -1.84
RXRBP28702 RNA5SP320-201ENST00000516263 124 ntBASIC3.54□□□□□ -1.84
RXRBP28702 RNU6-1337P-201ENST00000516525 95 ntBASIC3.54□□□□□ -1.84
RXRBP28702 AL021707.8-201ENST00000609428 183 ntBASIC3.54□□□□□ -1.84
RXRBP28702 U4.3-201ENST00000621047 82 ntBASIC3.54□□□□□ -1.84
RXRBP28702 U6.95-201ENST00000636931 70 ntBASIC3.54□□□□□ -1.84
RXRBP28702 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms