Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CACNA1FO60840 AL109809.4-201ENST00000603520 2185 ntBASIC1.91□□□□□ -2.1
CACNA1FO60840 RNU6-879P-201ENST00000364328 108 ntBASIC1.91□□□□□ -2.1
CACNA1FO60840 Y_RNA.292-201ENST00000364904 97 ntBASIC1.91□□□□□ -2.1
CACNA1FO60840 Y_RNA.446-201ENST00000384178 104 ntBASIC1.91□□□□□ -2.1
CACNA1FO60840 MIR147B-201ENST00000390185 80 ntBASIC1.91□□□□□ -2.1
CACNA1FO60840 RNU6-220P-201ENST00000390919 107 ntBASIC1.91□□□□□ -2.1
CACNA1FO60840 SNORA46.1-201ENST00000391069 153 ntBASIC1.91□□□□□ -2.1
CACNA1FO60840 SNORD58.1-201ENST00000391313 66 ntBASIC1.91□□□□□ -2.1
CACNA1FO60840 MIR1298-201ENST00000408783 112 ntBASIC1.91□□□□□ -2.1
CACNA1FO60840 RNU6-1328P-201ENST00000410938 106 ntBASIC1.91□□□□□ -2.1
CACNA1FO60840 PIGPP3-201ENST00000425307 415 ntBASIC1.91□□□□□ -2.1
CACNA1FO60840 snoU13.6-201ENST00000458785 104 ntBASIC1.91□□□□□ -2.1
CACNA1FO60840 RNU7-95P-201ENST00000459222 64 ntBASIC1.91□□□□□ -2.1
CACNA1FO60840 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CACNA1FO60840 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.91□□□□□ -2.1
CACNA1FO60840 AC115990.1-201ENST00000526957 301 ntBASIC1.91□□□□□ -2.1
CACNA1FO60840 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.91□□□□□ -2.1
CACNA1FO60840 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.91□□□□□ -2.1
CACNA1FO60840 AC233702.2-202ENST00000562547 291 ntBASIC1.91□□□□□ -2.1
CACNA1FO60840 SNORD53B-201ENST00000577887 78 ntBASIC1.91□□□□□ -2.1
CACNA1FO60840 AC010999.1-201ENST00000611856 324 ntBASIC1.91□□□□□ -2.1
CACNA1FO60840 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
CACNA1FO60840 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CACNA1FO60840 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.9□□□□□ -2.1
CACNA1FO60840 RNU6-661P-201ENST00000362409 107 ntBASIC1.9□□□□□ -2.1
CACNA1FO60840 RNU6-1010P-201ENST00000362757 107 ntBASIC1.9□□□□□ -2.1
CACNA1FO60840 SNORD81.1-201ENST00000363064 77 ntBASIC1.9□□□□□ -2.1
CACNA1FO60840 RNU6-20P-201ENST00000384106 107 ntBASIC1.9□□□□□ -2.1
CACNA1FO60840 Y_RNA.785-201ENST00000384290 109 ntBASIC1.9□□□□□ -2.1
CACNA1FO60840 RNU6-102P-201ENST00000384485 104 ntBASIC1.9□□□□□ -2.1
CACNA1FO60840 RNU6-21P-201ENST00000384710 107 ntBASIC1.9□□□□□ -2.1
CACNA1FO60840 MIR320B2-201ENST00000408479 138 ntBASIC1.9□□□□□ -2.1
CACNA1FO60840 U6atac.2-201ENST00000408644 118 ntBASIC1.9□□□□□ -2.1
CACNA1FO60840 ELOCP21-201ENST00000412558 336 ntBASIC1.9□□□□□ -2.1
CACNA1FO60840 RPL23AP3-201ENST00000453844 468 ntBASIC1.9□□□□□ -2.1
CACNA1FO60840 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.9□□□□□ -2.1
CACNA1FO60840 RN7SL274P-201ENST00000492268 272 ntBASIC1.9□□□□□ -2.1
CACNA1FO60840 RNU6-111P-201ENST00000517179 105 ntBASIC1.9□□□□□ -2.1
CACNA1FO60840 AL713866.2-201ENST00000603579 219 ntBASIC1.9□□□□□ -2.1
CACNA1FO60840 AL034555.1-201ENST00000604816 211 ntBASIC1.9□□□□□ -2.1
CACNA1FO60840 MTND5P35-201ENST00000557537 1720 ntBASIC1.9□□□□□ -2.11
CACNA1FO60840 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
CACNA1FO60840 Y_RNA.40-201ENST00000362645 93 ntBASIC1.9□□□□□ -2.11
CACNA1FO60840 RNY1P10-201ENST00000363268 113 ntBASIC1.9□□□□□ -2.11
CACNA1FO60840 MIR17-201ENST00000385012 84 ntBASIC1.9□□□□□ -2.11
CACNA1FO60840 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
CACNA1FO60840 MIR548M-201ENST00000408260 86 ntBASIC1.9□□□□□ -2.11
CACNA1FO60840 RNA5SP475-201ENST00000410568 110 ntBASIC1.9□□□□□ -2.11
CACNA1FO60840 RAB28P5-201ENST00000427490 651 ntBASIC1.9□□□□□ -2.11
CACNA1FO60840 AC104332.1-201ENST00000440471 797 ntBASIC1.9□□□□□ -2.11
CACNA1FO60840 AC087441.2-201ENST00000529141 262 ntBASIC1.9□□□□□ -2.11
CACNA1FO60840 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.9□□□□□ -2.11
CACNA1FO60840 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.9□□□□□ -2.11
CACNA1FO60840 AL162424.1-201ENST00000602325 221 ntBASIC1.9□□□□□ -2.11
CACNA1FO60840 AL645939.4-201ENST00000604495 135 ntBASIC1.9□□□□□ -2.11
CACNA1FO60840 BX284668.6-201ENST00000606899 438 ntBASIC1.9□□□□□ -2.11
CACNA1FO60840 MIR8081-201ENST00000611533 95 ntBASIC1.9□□□□□ -2.11
CACNA1FO60840 AC012640.5-201ENST00000623897 319 ntBASIC1.9□□□□□ -2.11
CACNA1FO60840 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.9□□□□□ -2.11
CACNA1FO60840 RNU6-60P-201ENST00000364792 103 ntBASIC1.89□□□□□ -2.11
CACNA1FO60840 MIR208B-201ENST00000401172 77 ntBASIC1.89□□□□□ -2.11
CACNA1FO60840 Y_RNA.590-201ENST00000410140 107 ntBASIC1.89□□□□□ -2.11
CACNA1FO60840 AL390729.2-201ENST00000416137 156 ntBASIC1.89□□□□□ -2.11
CACNA1FO60840 AC007215.1-201ENST00000464893 276 ntBASIC1.89□□□□□ -2.11
CACNA1FO60840 AC130289.1-201ENST00000577321 73 ntBASIC1.89□□□□□ -2.11
CACNA1FO60840 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CACNA1FO60840 UBE2WP1-201ENST00000362030 340 ntBASIC1.89□□□□□ -2.11
CACNA1FO60840 Y_RNA.83-201ENST00000363005 113 ntBASIC1.89□□□□□ -2.11
CACNA1FO60840 Y_RNA.269-201ENST00000364685 89 ntBASIC1.89□□□□□ -2.11
CACNA1FO60840 RNU6-200P-201ENST00000364743 107 ntBASIC1.89□□□□□ -2.11
CACNA1FO60840 AL133475.1-201ENST00000404414 305 ntBASIC1.89□□□□□ -2.11
CACNA1FO60840 RNU6-651P-201ENST00000411040 105 ntBASIC1.89□□□□□ -2.11
CACNA1FO60840 RNU2-14P-201ENST00000411053 191 ntBASIC1.89□□□□□ -2.11
CACNA1FO60840 AC004866.1-201ENST00000411748 78 ntBASIC1.89□□□□□ -2.11
CACNA1FO60840 snoU13.18-201ENST00000459483 104 ntBASIC1.89□□□□□ -2.11
CACNA1FO60840 RNU6-138P-201ENST00000515952 107 ntBASIC1.89□□□□□ -2.11
CACNA1FO60840 RNU1-104P-201ENST00000517280 175 ntBASIC1.89□□□□□ -2.11
CACNA1FO60840 AP002392.1-201ENST00000537692 208 ntBASIC1.89□□□□□ -2.11
CACNA1FO60840 MIR3145-201ENST00000580727 82 ntBASIC1.89□□□□□ -2.11
CACNA1FO60840 AC005176.2-201ENST00000596933 147 ntBASIC1.89□□□□□ -2.11
CACNA1FO60840 AC091152.3-201ENST00000604227 325 ntBASIC1.89□□□□□ -2.11
CACNA1FO60840 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.88□□□□□ -2.11
CACNA1FO60840 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CACNA1FO60840 MIR411-201ENST00000362239 96 ntBASIC1.88□□□□□ -2.11
CACNA1FO60840 Y_RNA.8-201ENST00000362353 102 ntBASIC1.88□□□□□ -2.11
CACNA1FO60840 RNU4-15P-201ENST00000362613 141 ntBASIC1.88□□□□□ -2.11
CACNA1FO60840 Y_RNA.122-201ENST00000363331 96 ntBASIC1.88□□□□□ -2.11
CACNA1FO60840 Y_RNA.200-201ENST00000364018 102 ntBASIC1.88□□□□□ -2.11
CACNA1FO60840 RNU6-454P-201ENST00000364292 107 ntBASIC1.88□□□□□ -2.11
CACNA1FO60840 Y_RNA.275-201ENST00000364726 110 ntBASIC1.88□□□□□ -2.11
CACNA1FO60840 RNU1-52P-201ENST00000384190 164 ntBASIC1.88□□□□□ -2.11
CACNA1FO60840 AL355497.1-201ENST00000406262 551 ntBASIC1.88□□□□□ -2.11
CACNA1FO60840 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.88□□□□□ -2.11
CACNA1FO60840 AL161651.1-201ENST00000440882 223 ntBASIC1.88□□□□□ -2.11
CACNA1FO60840 RPL26P26-201ENST00000480251 434 ntBASIC1.88□□□□□ -2.11
CACNA1FO60840 AL670379.2-201ENST00000604983 252 ntBASIC1.88□□□□□ -2.11
CACNA1FO60840 AL359821.1-201ENST00000605519 182 ntBASIC1.88□□□□□ -2.11
CACNA1FO60840 Y_RNA.76-201ENST00000362931 109 ntBASIC1.87□□□□□ -2.11
CACNA1FO60840 Y_RNA.418-201ENST00000384029 102 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms