Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 AC027119.1-201ENST00000440877 241 ntBASIC6.28□□□□□ -1.4
MSH5O43196 CYCSP35-201ENST00000451978 304 ntBASIC6.28□□□□□ -1.4
MSH5O43196 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
MSH5O43196 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
MSH5O43196 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC6.28□□□□□ -1.4
MSH5O43196 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
MSH5O43196 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
MSH5O43196 SNORA24B-201ENST00000384176 131 ntBASIC6.27□□□□□ -1.41
MSH5O43196 SNORD28B-201ENST00000390993 75 ntBASIC6.27□□□□□ -1.41
MSH5O43196 RN7SL297P-201ENST00000483161 293 ntBASIC6.27□□□□□ -1.41
MSH5O43196 RNA5SP168-201ENST00000516642 112 ntBASIC6.27□□□□□ -1.41
MSH5O43196 AC138749.4-201ENST00000563970 127 ntBASIC6.27□□□□□ -1.41
MSH5O43196 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC6.27□□□□□ -1.41
MSH5O43196 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC6.27□□□□□ -1.41
MSH5O43196 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC6.26□□□□□ -1.41
MSH5O43196 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC6.26□□□□□ -1.41
MSH5O43196 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC6.26□□□□□ -1.41
MSH5O43196 MIR3609-201ENST00000582661 80 ntBASIC6.26□□□□□ -1.41
MSH5O43196 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC6.26□□□□□ -1.41
MSH5O43196 NEAT1-202ENST00000501122 22743 ntBASIC6.26□□□□□ -1.41
MSH5O43196 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
MSH5O43196 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
MSH5O43196 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
MSH5O43196 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC6.25□□□□□ -1.41
MSH5O43196 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
MSH5O43196 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
MSH5O43196 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
MSH5O43196 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC6.25□□□□□ -1.41
MSH5O43196 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
MSH5O43196 RNU6-862P-201ENST00000362804 105 ntBASIC6.25□□□□□ -1.41
MSH5O43196 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
MSH5O43196 SNORA84-201ENST00000459229 133 ntBASIC6.25□□□□□ -1.41
MSH5O43196 YPEL5P3-201ENST00000547227 352 ntBASIC6.25□□□□□ -1.41
MSH5O43196 U4.3-201ENST00000621047 82 ntBASIC6.25□□□□□ -1.41
MSH5O43196 PLD1-217ENST00000627725 174 ntTSL 5 BASIC6.25□□□□□ -1.41
MSH5O43196 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC6.25□□□□□ -1.41
MSH5O43196 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
MSH5O43196 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
MSH5O43196 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
MSH5O43196 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
MSH5O43196 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC6.24□□□□□ -1.41
MSH5O43196 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC6.24□□□□□ -1.41
MSH5O43196 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
MSH5O43196 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC6.24□□□□□ -1.41
MSH5O43196 AL606517.2-201ENST00000442855 241 ntBASIC6.24□□□□□ -1.41
MSH5O43196 RN7SL517P-201ENST00000462240 305 ntBASIC6.24□□□□□ -1.41
MSH5O43196 MIR3920-201ENST00000581751 86 ntBASIC6.24□□□□□ -1.41
MSH5O43196 MIR6715B-201ENST00000637172 77 ntBASIC6.24□□□□□ -1.41
MSH5O43196 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC6.24□□□□□ -1.41
MSH5O43196 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC6.24□□□□□ -1.41
MSH5O43196 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
MSH5O43196 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
MSH5O43196 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
MSH5O43196 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
MSH5O43196 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC6.23□□□□□ -1.41
MSH5O43196 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
MSH5O43196 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
MSH5O43196 RNA5SP299-201ENST00000391203 116 ntBASIC6.23□□□□□ -1.41
MSH5O43196 SRIP3-201ENST00000413200 219 ntBASIC6.23□□□□□ -1.41
MSH5O43196 APOA2-207ENST00000470459 416 ntTSL 5 BASIC6.23□□□□□ -1.41
MSH5O43196 AC024995.1-201ENST00000523014 93 ntBASIC6.23□□□□□ -1.41
MSH5O43196 MIR548AR-201ENST00000582191 57 ntBASIC6.23□□□□□ -1.41
MSH5O43196 ZYXP1-201ENST00000617638 118 ntBASIC6.23□□□□□ -1.41
MSH5O43196 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
MSH5O43196 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC6.23□□□□□ -1.41
MSH5O43196 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
MSH5O43196 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
MSH5O43196 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
MSH5O43196 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
MSH5O43196 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC6.22□□□□□ -1.41
MSH5O43196 Y_RNA.239-201ENST00000364444 113 ntBASIC6.22□□□□□ -1.41
MSH5O43196 RNA5SP509-201ENST00000364577 119 ntBASIC6.22□□□□□ -1.41
MSH5O43196 RNA5SP372-201ENST00000390836 115 ntBASIC6.22□□□□□ -1.41
MSH5O43196 SNORA75.1-201ENST00000391130 148 ntBASIC6.22□□□□□ -1.41
MSH5O43196 HDGFP1-201ENST00000405943 252 ntBASIC6.22□□□□□ -1.41
MSH5O43196 SNORA31.9-201ENST00000516429 84 ntBASIC6.22□□□□□ -1.41
MSH5O43196 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
MSH5O43196 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
MSH5O43196 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
MSH5O43196 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
MSH5O43196 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.41
MSH5O43196 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
MSH5O43196 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
MSH5O43196 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
MSH5O43196 RNU6-1250P-201ENST00000391218 107 ntBASIC6.21□□□□□ -1.42
MSH5O43196 SCARNA10-201ENST00000459255 330 ntBASIC6.21□□□□□ -1.42
MSH5O43196 RPL32P34-201ENST00000486380 400 ntBASIC6.21□□□□□ -1.42
MSH5O43196 AC141846.1-201ENST00000568348 142 ntBASIC6.21□□□□□ -1.42
MSH5O43196 AC140113.4-201ENST00000622087 222 ntBASIC6.21□□□□□ -1.42
MSH5O43196 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
MSH5O43196 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
MSH5O43196 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
MSH5O43196 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC6.2□□□□□ -1.42
MSH5O43196 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC6.2□□□□□ -1.42
MSH5O43196 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC6.2□□□□□ -1.42
MSH5O43196 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
MSH5O43196 RNA5SP387-201ENST00000364226 106 ntBASIC6.2□□□□□ -1.42
MSH5O43196 MIR124-3-201ENST00000384866 87 ntBASIC6.2□□□□□ -1.42
MSH5O43196 RNU6-994P-201ENST00000410507 111 ntBASIC6.2□□□□□ -1.42
MSH5O43196 snoU13.16-201ENST00000459350 104 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 133.9 ms