Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 RNU6-805P-201ENST00000365643 106 ntBASIC3.27□□□□□ -1.89
AP4E1Q9UPM8 MIR562-201ENST00000384894 95 ntBASIC3.27□□□□□ -1.89
AP4E1Q9UPM8 SNORA48.8-201ENST00000391324 134 ntBASIC3.27□□□□□ -1.89
AP4E1Q9UPM8 AL603914.1-201ENST00000401964 204 ntBASIC3.27□□□□□ -1.89
AP4E1Q9UPM8 RNA5SP293-201ENST00000410527 113 ntBASIC3.27□□□□□ -1.89
AP4E1Q9UPM8 RNU2-70P-201ENST00000410718 179 ntBASIC3.27□□□□□ -1.89
AP4E1Q9UPM8 RNA5SP120-201ENST00000410900 112 ntBASIC3.27□□□□□ -1.89
AP4E1Q9UPM8 Y_RNA.617-201ENST00000410920 90 ntBASIC3.27□□□□□ -1.89
AP4E1Q9UPM8 RPS27P29-201ENST00000463110 252 ntBASIC3.27□□□□□ -1.89
AP4E1Q9UPM8 RPL27AP5-201ENST00000469428 449 ntBASIC3.27□□□□□ -1.89
AP4E1Q9UPM8 MRPS36P2-201ENST00000512569 299 ntBASIC3.27□□□□□ -1.89
AP4E1Q9UPM8 AC097462.1-201ENST00000514125 324 ntBASIC3.27□□□□□ -1.89
AP4E1Q9UPM8 AC133485.4-201ENST00000561835 220 ntBASIC3.27□□□□□ -1.89
AP4E1Q9UPM8 AC138907.4-201ENST00000570107 226 ntBASIC3.27□□□□□ -1.89
AP4E1Q9UPM8 MIR5680-201ENST00000577577 84 ntBASIC3.27□□□□□ -1.89
AP4E1Q9UPM8 AL670379.3-201ENST00000605040 251 ntBASIC3.27□□□□□ -1.89
AP4E1Q9UPM8 AC013412.1-201ENST00000610687 192 ntBASIC3.27□□□□□ -1.89
AP4E1Q9UPM8 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.27□□□□□ -1.89
AP4E1Q9UPM8 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
AP4E1Q9UPM8 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.27□□□□□ -1.89
AP4E1Q9UPM8 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
AP4E1Q9UPM8 AC091564.4-201ENST00000533934 2194 ntBASIC3.27□□□□□ -1.89
AP4E1Q9UPM8 AC103988.1-201ENST00000566382 2177 ntBASIC3.27□□□□□ -1.89
AP4E1Q9UPM8 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
AP4E1Q9UPM8 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.26□□□□□ -1.89
AP4E1Q9UPM8 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
AP4E1Q9UPM8 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
AP4E1Q9UPM8 MAPK10-266ENST00000641066 6555 ntBASIC3.26□□□□□ -1.89
AP4E1Q9UPM8 SNORA63.1-201ENST00000362493 131 ntBASIC3.26□□□□□ -1.89
AP4E1Q9UPM8 RNU6-508P-201ENST00000363231 103 ntBASIC3.26□□□□□ -1.89
AP4E1Q9UPM8 RNU6-1164P-201ENST00000364428 107 ntBASIC3.26□□□□□ -1.89
AP4E1Q9UPM8 RNU6-1240P-201ENST00000365155 104 ntBASIC3.26□□□□□ -1.89
AP4E1Q9UPM8 RNU6-136P-201ENST00000384663 107 ntBASIC3.26□□□□□ -1.89
AP4E1Q9UPM8 AC092185.1-201ENST00000491371 97 ntBASIC3.26□□□□□ -1.89
AP4E1Q9UPM8 RNU2-34P-201ENST00000516534 121 ntBASIC3.26□□□□□ -1.89
AP4E1Q9UPM8 RNU6-586P-201ENST00000517265 104 ntBASIC3.26□□□□□ -1.89
AP4E1Q9UPM8 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
AP4E1Q9UPM8 AC091178.2-201ENST00000584401 117 ntBASIC3.26□□□□□ -1.89
AP4E1Q9UPM8 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
AP4E1Q9UPM8 AC002064.3-201ENST00000623448 346 ntBASIC3.26□□□□□ -1.89
AP4E1Q9UPM8 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC3.26□□□□□ -1.89
AP4E1Q9UPM8 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
AP4E1Q9UPM8 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
AP4E1Q9UPM8 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.26□□□□□ -1.89
AP4E1Q9UPM8 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
AP4E1Q9UPM8 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
AP4E1Q9UPM8 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
AP4E1Q9UPM8 MIRLET7F2-201ENST00000385277 83 ntBASIC3.25□□□□□ -1.89
AP4E1Q9UPM8 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
AP4E1Q9UPM8 RNA5SP354-201ENST00000391247 136 ntBASIC3.25□□□□□ -1.89
AP4E1Q9UPM8 RNU4-47P-201ENST00000410876 114 ntBASIC3.25□□□□□ -1.89
AP4E1Q9UPM8 RPS12P18-201ENST00000442381 270 ntBASIC3.25□□□□□ -1.89
AP4E1Q9UPM8 RPS26P45-201ENST00000471748 340 ntBASIC3.25□□□□□ -1.89
AP4E1Q9UPM8 RNU6-1061P-201ENST00000516530 99 ntBASIC3.25□□□□□ -1.89
AP4E1Q9UPM8 Y_RNA.690-201ENST00000516603 95 ntBASIC3.25□□□□□ -1.89
AP4E1Q9UPM8 SCARNA11.3-201ENST00000517276 130 ntBASIC3.25□□□□□ -1.89
AP4E1Q9UPM8 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.25□□□□□ -1.89
AP4E1Q9UPM8 MIR4679-2-201ENST00000578358 77 ntBASIC3.25□□□□□ -1.89
AP4E1Q9UPM8 MIR2681-201ENST00000581814 105 ntBASIC3.25□□□□□ -1.89
AP4E1Q9UPM8 AC105245.1-201ENST00000581934 244 ntBASIC3.25□□□□□ -1.89
AP4E1Q9UPM8 MIR3117-201ENST00000584034 78 ntBASIC3.25□□□□□ -1.89
AP4E1Q9UPM8 MIR1248-201ENST00000629190 106 ntBASIC3.25□□□□□ -1.89
AP4E1Q9UPM8 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.25□□□□□ -1.89
AP4E1Q9UPM8 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.25□□□□□ -1.89
AP4E1Q9UPM8 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
AP4E1Q9UPM8 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC3.25□□□□□ -1.89
AP4E1Q9UPM8 AC093010.3-201ENST00000570269 15214 ntBASIC3.24□□□□□ -1.89
AP4E1Q9UPM8 RNU6-1138P-201ENST00000365359 106 ntBASIC3.24□□□□□ -1.89
AP4E1Q9UPM8 SNORA7.4-201ENST00000384249 137 ntBASIC3.24□□□□□ -1.89
AP4E1Q9UPM8 MIR34B-201ENST00000385076 84 ntBASIC3.24□□□□□ -1.89
AP4E1Q9UPM8 AC063976.3-201ENST00000426849 329 ntBASIC3.24□□□□□ -1.89
AP4E1Q9UPM8 TRIAP1P1-201ENST00000427062 225 ntBASIC3.24□□□□□ -1.89
AP4E1Q9UPM8 snoU13.22-201ENST00000459428 104 ntBASIC3.24□□□□□ -1.89
AP4E1Q9UPM8 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.24□□□□□ -1.89
AP4E1Q9UPM8 AC068657.1-201ENST00000520807 306 ntBASIC3.24□□□□□ -1.89
AP4E1Q9UPM8 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.24□□□□□ -1.89
AP4E1Q9UPM8 MIR4438-201ENST00000585271 93 ntBASIC3.24□□□□□ -1.89
AP4E1Q9UPM8 AC110079.1-202ENST00000635213 138 ntBASIC3.24□□□□□ -1.89
AP4E1Q9UPM8 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
AP4E1Q9UPM8 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
AP4E1Q9UPM8 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
AP4E1Q9UPM8 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.23□□□□□ -1.89
AP4E1Q9UPM8 MIR148B-201ENST00000362252 99 ntBASIC3.23□□□□□ -1.89
AP4E1Q9UPM8 Y_RNA.52-201ENST00000362760 96 ntBASIC3.23□□□□□ -1.89
AP4E1Q9UPM8 Y_RNA.111-201ENST00000363248 100 ntBASIC3.23□□□□□ -1.89
AP4E1Q9UPM8 RNU6-1255P-201ENST00000363434 112 ntBASIC3.23□□□□□ -1.89
AP4E1Q9UPM8 RNU6-1209P-201ENST00000363655 107 ntBASIC3.23□□□□□ -1.89
AP4E1Q9UPM8 RNU6-647P-201ENST00000364243 107 ntBASIC3.23□□□□□ -1.89
AP4E1Q9UPM8 RNU6-781P-201ENST00000516377 101 ntBASIC3.23□□□□□ -1.89
AP4E1Q9UPM8 RNU6-965P-201ENST00000516721 96 ntBASIC3.23□□□□□ -1.89
AP4E1Q9UPM8 AC007751.1-201ENST00000529260 376 ntBASIC3.23□□□□□ -1.89
AP4E1Q9UPM8 PRELID2P1-201ENST00000552837 301 ntBASIC3.23□□□□□ -1.89
AP4E1Q9UPM8 AL365205.2-201ENST00000594586 68 ntBASIC3.23□□□□□ -1.89
AP4E1Q9UPM8 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.23□□□□□ -1.89
AP4E1Q9UPM8 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
AP4E1Q9UPM8 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
AP4E1Q9UPM8 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
AP4E1Q9UPM8 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
AP4E1Q9UPM8 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
AP4E1Q9UPM8 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 173 ms