Protein–RNA interactions for Protein: Q9HCL0

PCDH18, Protocadherin-18, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18Q9HCL0 MIR526A2-201ENST00000390198 65 ntBASIC2.94□□□□□ -1.94
PCDH18Q9HCL0 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
PCDH18Q9HCL0 AL139132.1-201ENST00000431587 344 ntBASIC2.94□□□□□ -1.94
PCDH18Q9HCL0 SNORD65B-201ENST00000459126 73 ntBASIC2.94□□□□□ -1.94
PCDH18Q9HCL0 AC114982.1-201ENST00000469402 321 ntBASIC2.94□□□□□ -1.94
PCDH18Q9HCL0 RPL23AP54-201ENST00000495129 419 ntBASIC2.94□□□□□ -1.94
PCDH18Q9HCL0 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.94□□□□□ -1.94
PCDH18Q9HCL0 AC004486.1-201ENST00000546846 233 ntBASIC2.94□□□□□ -1.94
PCDH18Q9HCL0 POLR3GP1-201ENST00000594073 261 ntBASIC2.94□□□□□ -1.94
PCDH18Q9HCL0 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.94□□□□□ -1.94
PCDH18Q9HCL0 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.94□□□□□ -1.94
PCDH18Q9HCL0 SNORA70.4-201ENST00000365509 134 ntBASIC2.93□□□□□ -1.94
PCDH18Q9HCL0 CD24P4-201ENST00000382840 243 ntBASIC2.93□□□□□ -1.94
PCDH18Q9HCL0 Y_RNA.525-201ENST00000384570 113 ntBASIC2.93□□□□□ -1.94
PCDH18Q9HCL0 MIR873-201ENST00000401120 77 ntBASIC2.93□□□□□ -1.94
PCDH18Q9HCL0 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.93□□□□□ -1.94
PCDH18Q9HCL0 AC008267.6-201ENST00000441664 139 ntBASIC2.93□□□□□ -1.94
PCDH18Q9HCL0 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.93□□□□□ -1.94
PCDH18Q9HCL0 UBBP3-201ENST00000445497 241 ntBASIC2.93□□□□□ -1.94
PCDH18Q9HCL0 AC003982.1-202ENST00000469928 248 ntBASIC2.93□□□□□ -1.94
PCDH18Q9HCL0 SCARNA13-201ENST00000516672 275 ntBASIC2.93□□□□□ -1.94
PCDH18Q9HCL0 AC011603.4-201ENST00000611325 277 ntBASIC2.93□□□□□ -1.94
PCDH18Q9HCL0 AC110079.1-202ENST00000635213 138 ntBASIC2.93□□□□□ -1.94
PCDH18Q9HCL0 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.93□□□□□ -1.94
PCDH18Q9HCL0 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.93□□□□□ -1.94
PCDH18Q9HCL0 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
PCDH18Q9HCL0 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
PCDH18Q9HCL0 RNA5SP139-201ENST00000364340 117 ntBASIC2.92□□□□□ -1.94
PCDH18Q9HCL0 RNU6-1180P-201ENST00000364935 107 ntBASIC2.92□□□□□ -1.94
PCDH18Q9HCL0 RNU6-234P-201ENST00000365229 104 ntBASIC2.92□□□□□ -1.94
PCDH18Q9HCL0 RNU6-728P-201ENST00000365375 104 ntBASIC2.92□□□□□ -1.94
PCDH18Q9HCL0 MIR23A-201ENST00000385245 73 ntBASIC2.92□□□□□ -1.94
PCDH18Q9HCL0 RNU6-1228P-201ENST00000391014 107 ntBASIC2.92□□□□□ -1.94
PCDH18Q9HCL0 Y_RNA.587-201ENST00000391210 103 ntBASIC2.92□□□□□ -1.94
PCDH18Q9HCL0 RNA5SP511-201ENST00000410487 115 ntBASIC2.92□□□□□ -1.94
PCDH18Q9HCL0 EEF1A1P41-201ENST00000414667 207 ntBASIC2.92□□□□□ -1.94
PCDH18Q9HCL0 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.92□□□□□ -1.94
PCDH18Q9HCL0 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.92□□□□□ -1.94
PCDH18Q9HCL0 Z96811.1-201ENST00000445880 108 ntBASIC2.92□□□□□ -1.94
PCDH18Q9HCL0 S100A11P2-201ENST00000467589 312 ntBASIC2.92□□□□□ -1.94
PCDH18Q9HCL0 AC092991.1-201ENST00000477176 376 ntBASIC2.92□□□□□ -1.94
PCDH18Q9HCL0 AC091826.1-201ENST00000514065 313 ntBASIC2.92□□□□□ -1.94
PCDH18Q9HCL0 RNU2-56P-201ENST00000516826 190 ntBASIC2.92□□□□□ -1.94
PCDH18Q9HCL0 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.92□□□□□ -1.94
PCDH18Q9HCL0 LARP7P3-201ENST00000579888 337 ntBASIC2.92□□□□□ -1.94
PCDH18Q9HCL0 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.92□□□□□ -1.94
PCDH18Q9HCL0 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.92□□□□□ -1.94
PCDH18Q9HCL0 AC012640.5-201ENST00000623897 319 ntBASIC2.92□□□□□ -1.94
PCDH18Q9HCL0 snoZ196.1-201ENST00000625269 89 ntBASIC2.92□□□□□ -1.94
PCDH18Q9HCL0 MIR6844-201ENST00000637122 62 ntBASIC2.92□□□□□ -1.94
PCDH18Q9HCL0 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.92□□□□□ -1.94
PCDH18Q9HCL0 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
PCDH18Q9HCL0 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
PCDH18Q9HCL0 AL161431.1-201ENST00000618966 4205 ntBASIC2.91□□□□□ -1.94
PCDH18Q9HCL0 SNORA27.1-201ENST00000362604 124 ntBASIC2.91□□□□□ -1.94
PCDH18Q9HCL0 RNU1-72P-201ENST00000362976 153 ntBASIC2.91□□□□□ -1.94
PCDH18Q9HCL0 RNA5SP387-201ENST00000364226 106 ntBASIC2.91□□□□□ -1.94
PCDH18Q9HCL0 RNU6-44P-201ENST00000384045 107 ntBASIC2.91□□□□□ -1.94
PCDH18Q9HCL0 SNORA44-201ENST00000384584 132 ntBASIC2.91□□□□□ -1.94
PCDH18Q9HCL0 MIR29B2-201ENST00000385055 81 ntBASIC2.91□□□□□ -1.94
PCDH18Q9HCL0 AL590004.2-201ENST00000404787 371 ntBASIC2.91□□□□□ -1.94
PCDH18Q9HCL0 RNU6-1328P-201ENST00000410938 106 ntBASIC2.91□□□□□ -1.94
PCDH18Q9HCL0 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.91□□□□□ -1.94
PCDH18Q9HCL0 RPL23AP58-201ENST00000440453 469 ntBASIC2.91□□□□□ -1.94
PCDH18Q9HCL0 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.91□□□□□ -1.94
PCDH18Q9HCL0 RNA5SP20-201ENST00000515976 84 ntBASIC2.91□□□□□ -1.94
PCDH18Q9HCL0 Y_RNA.686-201ENST00000516548 134 ntBASIC2.91□□□□□ -1.94
PCDH18Q9HCL0 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.91□□□□□ -1.94
PCDH18Q9HCL0 AC109329.2-201ENST00000519658 482 ntBASIC2.91□□□□□ -1.94
PCDH18Q9HCL0 MIR3670-2-201ENST00000582974 65 ntBASIC2.91□□□□□ -1.94
PCDH18Q9HCL0 MIR3670-1-201ENST00000584160 65 ntBASIC2.91□□□□□ -1.94
PCDH18Q9HCL0 MIR3670-3-201ENST00000584855 65 ntBASIC2.91□□□□□ -1.94
PCDH18Q9HCL0 AL359881.1-201ENST00000602916 267 ntBASIC2.91□□□□□ -1.94
PCDH18Q9HCL0 AL391903.3-201ENST00000612158 163 ntBASIC2.91□□□□□ -1.94
PCDH18Q9HCL0 MIR3670-4-201ENST00000612260 65 ntBASIC2.91□□□□□ -1.94
PCDH18Q9HCL0 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
PCDH18Q9HCL0 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
PCDH18Q9HCL0 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.91□□□□□ -1.94
PCDH18Q9HCL0 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
PCDH18Q9HCL0 Y_RNA.127-201ENST00000363386 109 ntBASIC2.9□□□□□ -1.95
PCDH18Q9HCL0 Y_RNA.294-201ENST00000364916 102 ntBASIC2.9□□□□□ -1.95
PCDH18Q9HCL0 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.9□□□□□ -1.95
PCDH18Q9HCL0 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.9□□□□□ -1.95
PCDH18Q9HCL0 RNU7-197P-201ENST00000458836 62 ntBASIC2.9□□□□□ -1.95
PCDH18Q9HCL0 RPS26P55-201ENST00000471178 356 ntBASIC2.9□□□□□ -1.95
PCDH18Q9HCL0 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.9□□□□□ -1.95
PCDH18Q9HCL0 RNA5SP112-201ENST00000515937 99 ntBASIC2.9□□□□□ -1.95
PCDH18Q9HCL0 RPL12P50-201ENST00000603116 116 ntBASIC2.9□□□□□ -1.95
PCDH18Q9HCL0 AL049861.1-201ENST00000603130 150 ntBASIC2.9□□□□□ -1.95
PCDH18Q9HCL0 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
PCDH18Q9HCL0 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
PCDH18Q9HCL0 AC009487.2-201ENST00000420969 6821 ntBASIC2.9□□□□□ -1.95
PCDH18Q9HCL0 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.9□□□□□ -1.95
PCDH18Q9HCL0 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
PCDH18Q9HCL0 SNORD45.3-201ENST00000363836 72 ntBASIC2.89□□□□□ -1.95
PCDH18Q9HCL0 RNU6-1082P-201ENST00000364574 107 ntBASIC2.89□□□□□ -1.95
PCDH18Q9HCL0 RNA5SP205-201ENST00000364653 136 ntBASIC2.89□□□□□ -1.95
PCDH18Q9HCL0 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
PCDH18Q9HCL0 RNU6-144P-201ENST00000383951 107 ntBASIC2.89□□□□□ -1.95
PCDH18Q9HCL0 RNU6-975P-201ENST00000384296 105 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms