Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 UCA1.1-201ENST00000620952 75 ntBASIC3.28□□□□□ -1.88
ATXN3LQ9H3M9 AC093010.3-201ENST00000570269 15214 ntBASIC3.28□□□□□ -1.88
ATXN3LQ9H3M9 AC091564.4-201ENST00000533934 2194 ntBASIC3.28□□□□□ -1.88
ATXN3LQ9H3M9 Z82209.1-201ENST00000422141 2135 ntBASIC3.28□□□□□ -1.89
ATXN3LQ9H3M9 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.27□□□□□ -1.89
ATXN3LQ9H3M9 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
ATXN3LQ9H3M9 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.27□□□□□ -1.89
ATXN3LQ9H3M9 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
ATXN3LQ9H3M9 RNA5SP295-201ENST00000362655 121 ntBASIC3.27□□□□□ -1.89
ATXN3LQ9H3M9 SNORA80A-201ENST00000363922 136 ntBASIC3.27□□□□□ -1.89
ATXN3LQ9H3M9 SNORA14A-201ENST00000364773 135 ntBASIC3.27□□□□□ -1.89
ATXN3LQ9H3M9 RNU6-438P-201ENST00000365561 103 ntBASIC3.27□□□□□ -1.89
ATXN3LQ9H3M9 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
ATXN3LQ9H3M9 SNORA11.2-201ENST00000408318 127 ntBASIC3.27□□□□□ -1.89
ATXN3LQ9H3M9 RNU2-55P-201ENST00000411146 174 ntBASIC3.27□□□□□ -1.89
ATXN3LQ9H3M9 AC022018.1-201ENST00000430685 241 ntBASIC3.27□□□□□ -1.89
ATXN3LQ9H3M9 RN7SL442P-201ENST00000473804 320 ntBASIC3.27□□□□□ -1.89
ATXN3LQ9H3M9 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.27□□□□□ -1.89
ATXN3LQ9H3M9 RNU6-711P-201ENST00000517255 106 ntBASIC3.27□□□□□ -1.89
ATXN3LQ9H3M9 RPL23AP91-201ENST00000569211 455 ntBASIC3.27□□□□□ -1.89
ATXN3LQ9H3M9 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.27□□□□□ -1.89
ATXN3LQ9H3M9 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.27□□□□□ -1.89
ATXN3LQ9H3M9 MIR3914-2-201ENST00000637339 95 ntBASIC3.27□□□□□ -1.89
ATXN3LQ9H3M9 MIR622-201ENST00000638396 96 ntBASIC3.27□□□□□ -1.89
ATXN3LQ9H3M9 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
ATXN3LQ9H3M9 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
ATXN3LQ9H3M9 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
ATXN3LQ9H3M9 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
ATXN3LQ9H3M9 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
ATXN3LQ9H3M9 Y_RNA.91-201ENST00000363042 107 ntBASIC3.26□□□□□ -1.89
ATXN3LQ9H3M9 SNORA40.5-201ENST00000391061 128 ntBASIC3.26□□□□□ -1.89
ATXN3LQ9H3M9 MLLT10P1-201ENST00000418346 262 ntBASIC3.26□□□□□ -1.89
ATXN3LQ9H3M9 AC008134.1-201ENST00000420943 193 ntBASIC3.26□□□□□ -1.89
ATXN3LQ9H3M9 RPL30P4-201ENST00000429309 333 ntBASIC3.26□□□□□ -1.89
ATXN3LQ9H3M9 AC006539.3-201ENST00000454258 129 ntBASIC3.26□□□□□ -1.89
ATXN3LQ9H3M9 CYCTP-201ENST00000504253 315 ntBASIC3.26□□□□□ -1.89
ATXN3LQ9H3M9 Y_RNA.692-201ENST00000516627 105 ntBASIC3.26□□□□□ -1.89
ATXN3LQ9H3M9 Y_RNA.709-201ENST00000516952 92 ntBASIC3.26□□□□□ -1.89
ATXN3LQ9H3M9 SCARNA20.6-201ENST00000517251 106 ntBASIC3.26□□□□□ -1.89
ATXN3LQ9H3M9 AC104027.1-201ENST00000521887 300 ntBASIC3.26□□□□□ -1.89
ATXN3LQ9H3M9 MIR3117-201ENST00000584034 78 ntBASIC3.26□□□□□ -1.89
ATXN3LQ9H3M9 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC3.26□□□□□ -1.89
ATXN3LQ9H3M9 MIR6852-201ENST00000621699 66 ntBASIC3.26□□□□□ -1.89
ATXN3LQ9H3M9 AC006435.5-201ENST00000624486 112 ntBASIC3.26□□□□□ -1.89
ATXN3LQ9H3M9 MIR1248-201ENST00000629190 106 ntBASIC3.26□□□□□ -1.89
ATXN3LQ9H3M9 AC110079.1-202ENST00000635213 138 ntBASIC3.26□□□□□ -1.89
ATXN3LQ9H3M9 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
ATXN3LQ9H3M9 Y_RNA.203-201ENST00000364106 102 ntBASIC3.25□□□□□ -1.89
ATXN3LQ9H3M9 RNU6-1240P-201ENST00000365155 104 ntBASIC3.25□□□□□ -1.89
ATXN3LQ9H3M9 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
ATXN3LQ9H3M9 RNU2-70P-201ENST00000410718 179 ntBASIC3.25□□□□□ -1.89
ATXN3LQ9H3M9 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC3.25□□□□□ -1.89
ATXN3LQ9H3M9 AC025750.2-201ENST00000442609 450 ntBASIC3.25□□□□□ -1.89
ATXN3LQ9H3M9 RPS4XP11-201ENST00000446897 772 ntBASIC3.25□□□□□ -1.89
ATXN3LQ9H3M9 SNORA64.4-201ENST00000516632 81 ntBASIC3.25□□□□□ -1.89
ATXN3LQ9H3M9 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.25□□□□□ -1.89
ATXN3LQ9H3M9 AL160236.1-201ENST00000556317 195 ntBASIC3.25□□□□□ -1.89
ATXN3LQ9H3M9 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
ATXN3LQ9H3M9 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
ATXN3LQ9H3M9 MIR7106-201ENST00000612419 65 ntBASIC3.25□□□□□ -1.89
ATXN3LQ9H3M9 SNORA50A-202ENST00000629536 136 ntBASIC3.25□□□□□ -1.89
ATXN3LQ9H3M9 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
ATXN3LQ9H3M9 AC009487.2-201ENST00000420969 6821 ntBASIC3.25□□□□□ -1.89
ATXN3LQ9H3M9 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
ATXN3LQ9H3M9 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC3.25□□□□□ -1.89
ATXN3LQ9H3M9 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
ATXN3LQ9H3M9 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
ATXN3LQ9H3M9 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
ATXN3LQ9H3M9 RNU1-22P-201ENST00000363334 158 ntBASIC3.24□□□□□ -1.89
ATXN3LQ9H3M9 SNORD67-201ENST00000390833 111 ntBASIC3.24□□□□□ -1.89
ATXN3LQ9H3M9 RN7SKP220-201ENST00000410611 288 ntBASIC3.24□□□□□ -1.89
ATXN3LQ9H3M9 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.24□□□□□ -1.89
ATXN3LQ9H3M9 AL158147.1-201ENST00000443970 75 ntBASIC3.24□□□□□ -1.89
ATXN3LQ9H3M9 HMGN2P18-201ENST00000450680 270 ntBASIC3.24□□□□□ -1.89
ATXN3LQ9H3M9 SNORD77.4-201ENST00000516158 81 ntBASIC3.24□□□□□ -1.89
ATXN3LQ9H3M9 RNU1-143P-201ENST00000516296 146 ntBASIC3.24□□□□□ -1.89
ATXN3LQ9H3M9 CYCSP26-201ENST00000534107 320 ntBASIC3.24□□□□□ -1.89
ATXN3LQ9H3M9 AC108081.1-201ENST00000604358 221 ntBASIC3.24□□□□□ -1.89
ATXN3LQ9H3M9 U1.23-201ENST00000610293 146 ntBASIC3.24□□□□□ -1.89
ATXN3LQ9H3M9 RNU1-68P-201ENST00000615382 146 ntBASIC3.24□□□□□ -1.89
ATXN3LQ9H3M9 uc_338.4-201ENST00000616635 176 ntBASIC3.24□□□□□ -1.89
ATXN3LQ9H3M9 U1.39-201ENST00000621562 146 ntBASIC3.24□□□□□ -1.89
ATXN3LQ9H3M9 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.24□□□□□ -1.89
ATXN3LQ9H3M9 MIR7153-201ENST00000637758 57 ntBASIC3.24□□□□□ -1.89
ATXN3LQ9H3M9 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
ATXN3LQ9H3M9 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
ATXN3LQ9H3M9 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ATXN3LQ9H3M9 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
ATXN3LQ9H3M9 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ATXN3LQ9H3M9 MIR22-201ENST00000362190 85 ntBASIC3.23□□□□□ -1.89
ATXN3LQ9H3M9 Y_RNA.120-201ENST00000363304 110 ntBASIC3.23□□□□□ -1.89
ATXN3LQ9H3M9 SNORD56.3-201ENST00000363507 71 ntBASIC3.23□□□□□ -1.89
ATXN3LQ9H3M9 Y_RNA.280-201ENST00000364765 112 ntBASIC3.23□□□□□ -1.89
ATXN3LQ9H3M9 MIR218-1-201ENST00000384999 110 ntBASIC3.23□□□□□ -1.89
ATXN3LQ9H3M9 RNU6-1328P-201ENST00000410938 106 ntBASIC3.23□□□□□ -1.89
ATXN3LQ9H3M9 AL357134.1-201ENST00000445848 426 ntBASIC3.23□□□□□ -1.89
ATXN3LQ9H3M9 AC245102.2-201ENST00000448956 180 ntBASIC3.23□□□□□ -1.89
ATXN3LQ9H3M9 SNORD33.1-201ENST00000516213 88 ntBASIC3.23□□□□□ -1.89
ATXN3LQ9H3M9 RNU6-589P-201ENST00000516485 107 ntBASIC3.23□□□□□ -1.89
ATXN3LQ9H3M9 RNU6-1061P-201ENST00000516530 99 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 209.1 ms