Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.41□□□□□ -1.86
CNTNAP4Q9C0A0 AP001340.1-201ENST00000624405 217 ntBASIC3.41□□□□□ -1.86
CNTNAP4Q9C0A0 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.4□□□□□ -1.86
CNTNAP4Q9C0A0 ZNF702P-202ENST00000434269 1966 ntBASIC3.4□□□□□ -1.86
CNTNAP4Q9C0A0 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.4□□□□□ -1.87
CNTNAP4Q9C0A0 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CNTNAP4Q9C0A0 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CNTNAP4Q9C0A0 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
CNTNAP4Q9C0A0 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CNTNAP4Q9C0A0 Y_RNA.294-201ENST00000364916 102 ntBASIC3.4□□□□□ -1.87
CNTNAP4Q9C0A0 RNU6-643P-201ENST00000384018 107 ntBASIC3.4□□□□□ -1.87
CNTNAP4Q9C0A0 MIR29B2-201ENST00000385055 81 ntBASIC3.4□□□□□ -1.87
CNTNAP4Q9C0A0 MIR300-201ENST00000401138 83 ntBASIC3.4□□□□□ -1.87
CNTNAP4Q9C0A0 RNU4-43P-201ENST00000410628 137 ntBASIC3.4□□□□□ -1.87
CNTNAP4Q9C0A0 RN7SKP192-201ENST00000411291 327 ntBASIC3.4□□□□□ -1.87
CNTNAP4Q9C0A0 RN7SL442P-201ENST00000473804 320 ntBASIC3.4□□□□□ -1.87
CNTNAP4Q9C0A0 RPL36AP21-201ENST00000490372 323 ntBASIC3.4□□□□□ -1.87
CNTNAP4Q9C0A0 AC099778.2-201ENST00000610904 211 ntBASIC3.4□□□□□ -1.87
CNTNAP4Q9C0A0 AL591926.4-201ENST00000616895 298 ntBASIC3.4□□□□□ -1.87
CNTNAP4Q9C0A0 snoZ196.1-201ENST00000625269 89 ntBASIC3.4□□□□□ -1.87
CNTNAP4Q9C0A0 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CNTNAP4Q9C0A0 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
CNTNAP4Q9C0A0 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CNTNAP4Q9C0A0 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CNTNAP4Q9C0A0 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.39□□□□□ -1.87
CNTNAP4Q9C0A0 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CNTNAP4Q9C0A0 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CNTNAP4Q9C0A0 MIR367-201ENST00000362299 68 ntBASIC3.39□□□□□ -1.87
CNTNAP4Q9C0A0 RNU6-1048P-201ENST00000364054 107 ntBASIC3.39□□□□□ -1.87
CNTNAP4Q9C0A0 Y_RNA.251-201ENST00000364551 99 ntBASIC3.39□□□□□ -1.87
CNTNAP4Q9C0A0 MIR15B-201ENST00000385045 98 ntBASIC3.39□□□□□ -1.87
CNTNAP4Q9C0A0 SNORD37.2-201ENST00000391075 66 ntBASIC3.39□□□□□ -1.87
CNTNAP4Q9C0A0 MIR1302-4-201ENST00000408701 150 ntBASIC3.39□□□□□ -1.87
CNTNAP4Q9C0A0 AC006461.1-201ENST00000412637 326 ntBASIC3.39□□□□□ -1.87
CNTNAP4Q9C0A0 MTCO1P44-201ENST00000441935 243 ntBASIC3.39□□□□□ -1.87
CNTNAP4Q9C0A0 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.39□□□□□ -1.87
CNTNAP4Q9C0A0 RN7SKP179-201ENST00000516126 217 ntBASIC3.39□□□□□ -1.87
CNTNAP4Q9C0A0 Y_RNA.694-201ENST00000516677 117 ntBASIC3.39□□□□□ -1.87
CNTNAP4Q9C0A0 RNU2-56P-201ENST00000516826 190 ntBASIC3.39□□□□□ -1.87
CNTNAP4Q9C0A0 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CNTNAP4Q9C0A0 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.39□□□□□ -1.87
CNTNAP4Q9C0A0 MIR3914-2-201ENST00000637339 95 ntBASIC3.39□□□□□ -1.87
CNTNAP4Q9C0A0 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.39□□□□□ -1.87
CNTNAP4Q9C0A0 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CNTNAP4Q9C0A0 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
CNTNAP4Q9C0A0 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.38□□□□□ -1.87
CNTNAP4Q9C0A0 AC093010.3-201ENST00000570269 15214 ntBASIC3.38□□□□□ -1.87
CNTNAP4Q9C0A0 AP001486.2-201ENST00000561652 5113 ntBASIC3.38□□□□□ -1.87
CNTNAP4Q9C0A0 U8.2-201ENST00000363156 134 ntBASIC3.38□□□□□ -1.87
CNTNAP4Q9C0A0 RNU6-271P-201ENST00000363858 105 ntBASIC3.38□□□□□ -1.87
CNTNAP4Q9C0A0 Y_RNA.229-201ENST00000364347 113 ntBASIC3.38□□□□□ -1.87
CNTNAP4Q9C0A0 RNU6-1305P-201ENST00000364353 104 ntBASIC3.38□□□□□ -1.87
CNTNAP4Q9C0A0 SNORD32B-201ENST00000364460 84 ntBASIC3.38□□□□□ -1.87
CNTNAP4Q9C0A0 RNU6-407P-201ENST00000365280 104 ntBASIC3.38□□□□□ -1.87
CNTNAP4Q9C0A0 Y_RNA.369-201ENST00000365568 117 ntBASIC3.38□□□□□ -1.87
CNTNAP4Q9C0A0 MIR873-201ENST00000401120 77 ntBASIC3.38□□□□□ -1.87
CNTNAP4Q9C0A0 AL606845.1-201ENST00000404881 255 ntBASIC3.38□□□□□ -1.87
CNTNAP4Q9C0A0 AC112771.1-201ENST00000463581 102 ntBASIC3.38□□□□□ -1.87
CNTNAP4Q9C0A0 RNA5SP320-201ENST00000516263 124 ntBASIC3.38□□□□□ -1.87
CNTNAP4Q9C0A0 AC090049.2-201ENST00000550377 109 ntBASIC3.38□□□□□ -1.87
CNTNAP4Q9C0A0 AC008739.2-201ENST00000597006 317 ntBASIC3.38□□□□□ -1.87
CNTNAP4Q9C0A0 AC108081.1-201ENST00000604358 221 ntBASIC3.38□□□□□ -1.87
CNTNAP4Q9C0A0 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.38□□□□□ -1.87
CNTNAP4Q9C0A0 MIR6844-201ENST00000637122 62 ntBASIC3.38□□□□□ -1.87
CNTNAP4Q9C0A0 AC009487.4-201ENST00000624969 3585 ntBASIC3.38□□□□□ -1.87
CNTNAP4Q9C0A0 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.37□□□□□ -1.87
CNTNAP4Q9C0A0 RNA5SP289-201ENST00000362332 137 ntBASIC3.37□□□□□ -1.87
CNTNAP4Q9C0A0 RNU6-235P-201ENST00000362644 107 ntBASIC3.37□□□□□ -1.87
CNTNAP4Q9C0A0 SNORA51.4-201ENST00000364993 124 ntBASIC3.37□□□□□ -1.87
CNTNAP4Q9C0A0 RNU6-805P-201ENST00000365643 106 ntBASIC3.37□□□□□ -1.87
CNTNAP4Q9C0A0 RNU6-1323P-201ENST00000384025 107 ntBASIC3.37□□□□□ -1.87
CNTNAP4Q9C0A0 MIR518C-201ENST00000384822 101 ntBASIC3.37□□□□□ -1.87
CNTNAP4Q9C0A0 AC097463.2-201ENST00000421074 142 ntBASIC3.37□□□□□ -1.87
CNTNAP4Q9C0A0 RPS27P1-201ENST00000450552 247 ntBASIC3.37□□□□□ -1.87
CNTNAP4Q9C0A0 AC245047.8-201ENST00000456455 284 ntBASIC3.37□□□□□ -1.87
CNTNAP4Q9C0A0 snoU13.15-201ENST00000459407 104 ntBASIC3.37□□□□□ -1.87
CNTNAP4Q9C0A0 RNU7-115P-201ENST00000516433 55 ntBASIC3.37□□□□□ -1.87
CNTNAP4Q9C0A0 RNU7-116P-201ENST00000516940 62 ntBASIC3.37□□□□□ -1.87
CNTNAP4Q9C0A0 AP001328.1-201ENST00000528550 176 ntBASIC3.37□□□□□ -1.87
CNTNAP4Q9C0A0 U7.2-201ENST00000607576 63 ntBASIC3.37□□□□□ -1.87
CNTNAP4Q9C0A0 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.37□□□□□ -1.87
CNTNAP4Q9C0A0 AC012640.5-201ENST00000623897 319 ntBASIC3.37□□□□□ -1.87
CNTNAP4Q9C0A0 AL353746.1-201ENST00000566293 6881 ntBASIC3.37□□□□□ -1.87
CNTNAP4Q9C0A0 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CNTNAP4Q9C0A0 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CNTNAP4Q9C0A0 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.36□□□□□ -1.87
CNTNAP4Q9C0A0 SNORA25.7-201ENST00000364375 127 ntBASIC3.36□□□□□ -1.87
CNTNAP4Q9C0A0 RNU6-768P-201ENST00000384683 107 ntBASIC3.36□□□□□ -1.87
CNTNAP4Q9C0A0 MIR592-201ENST00000384959 97 ntBASIC3.36□□□□□ -1.87
CNTNAP4Q9C0A0 RNA5SP38-201ENST00000410750 119 ntBASIC3.36□□□□□ -1.87
CNTNAP4Q9C0A0 HSPE1P21-201ENST00000438283 308 ntBASIC3.36□□□□□ -1.87
CNTNAP4Q9C0A0 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.36□□□□□ -1.87
CNTNAP4Q9C0A0 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.36□□□□□ -1.87
CNTNAP4Q9C0A0 RNU6-561P-201ENST00000516222 102 ntBASIC3.36□□□□□ -1.87
CNTNAP4Q9C0A0 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.36□□□□□ -1.87
CNTNAP4Q9C0A0 AP003357.1-201ENST00000604497 148 ntBASIC3.36□□□□□ -1.87
CNTNAP4Q9C0A0 MIR548AY-201ENST00000617669 107 ntBASIC3.36□□□□□ -1.87
CNTNAP4Q9C0A0 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.36□□□□□ -1.87
CNTNAP4Q9C0A0 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CNTNAP4Q9C0A0 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 189.2 ms