Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.04□□□□□ -2.24
LINC00477Q96M19 MIR5690-201ENST00000583739 73 ntBASIC1.04□□□□□ -2.24
LINC00477Q96M19 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
LINC00477Q96M19 AL359697.1-201ENST00000624879 587 ntBASIC1.04□□□□□ -2.24
LINC00477Q96M19 AC073544.1-201ENST00000600110 1595 ntBASIC1.04□□□□□ -2.24
LINC00477Q96M19 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.03□□□□□ -2.24
LINC00477Q96M19 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
LINC00477Q96M19 MIR26B-201ENST00000362251 77 ntBASIC1.03□□□□□ -2.24
LINC00477Q96M19 RPL21P1-201ENST00000399532 476 ntBASIC1.03□□□□□ -2.24
LINC00477Q96M19 RNU6-1186P-201ENST00000410429 97 ntBASIC1.03□□□□□ -2.24
LINC00477Q96M19 RNU6-1199P-201ENST00000411249 104 ntBASIC1.03□□□□□ -2.24
LINC00477Q96M19 CST2P1-201ENST00000425770 87 ntBASIC1.03□□□□□ -2.24
LINC00477Q96M19 MTND1P14-201ENST00000427400 950 ntBASIC1.03□□□□□ -2.24
LINC00477Q96M19 RAB28P5-201ENST00000427490 651 ntBASIC1.03□□□□□ -2.24
LINC00477Q96M19 AC093019.1-201ENST00000443135 252 ntBASIC1.03□□□□□ -2.24
LINC00477Q96M19 UQCRBP2-201ENST00000447827 297 ntBASIC1.03□□□□□ -2.24
LINC00477Q96M19 RN7SL429P-201ENST00000479090 223 ntBASIC1.03□□□□□ -2.24
LINC00477Q96M19 RN7SL489P-201ENST00000486185 223 ntBASIC1.03□□□□□ -2.24
LINC00477Q96M19 RN7SL327P-201ENST00000488659 223 ntBASIC1.03□□□□□ -2.24
LINC00477Q96M19 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.03□□□□□ -2.24
LINC00477Q96M19 RNU6-408P-201ENST00000515910 100 ntBASIC1.03□□□□□ -2.24
LINC00477Q96M19 RN7SKP49-201ENST00000516675 260 ntBASIC1.03□□□□□ -2.24
LINC00477Q96M19 RNU6-63P-201ENST00000516690 95 ntBASIC1.03□□□□□ -2.24
LINC00477Q96M19 RNU4-77P-201ENST00000516692 156 ntBASIC1.03□□□□□ -2.24
LINC00477Q96M19 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.03□□□□□ -2.24
LINC00477Q96M19 AC023442.1-201ENST00000531247 422 ntBASIC1.03□□□□□ -2.24
LINC00477Q96M19 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.03□□□□□ -2.24
LINC00477Q96M19 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.03□□□□□ -2.24
LINC00477Q96M19 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.03□□□□□ -2.24
LINC00477Q96M19 MIR3945-201ENST00000581853 98 ntBASIC1.03□□□□□ -2.24
LINC00477Q96M19 AC007485.1-201ENST00000616755 206 ntBASIC1.03□□□□□ -2.24
LINC00477Q96M19 RN7SL853P-201ENST00000617250 223 ntBASIC1.03□□□□□ -2.24
LINC00477Q96M19 MIR4272-201ENST00000635924 64 ntBASIC1.03□□□□□ -2.24
LINC00477Q96M19 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.03□□□□□ -2.25
LINC00477Q96M19 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.03□□□□□ -2.25
LINC00477Q96M19 MIR369-201ENST00000362155 70 ntBASIC1.02□□□□□ -2.25
LINC00477Q96M19 MIR302D-201ENST00000362275 68 ntBASIC1.02□□□□□ -2.25
LINC00477Q96M19 SNORD33-201ENST00000362761 85 ntBASIC1.02□□□□□ -2.25
LINC00477Q96M19 RNU4-13P-201ENST00000364019 141 ntBASIC1.02□□□□□ -2.25
LINC00477Q96M19 RNU6-280P-201ENST00000364145 104 ntBASIC1.02□□□□□ -2.25
LINC00477Q96M19 RNU6-1019P-201ENST00000364424 107 ntBASIC1.02□□□□□ -2.25
LINC00477Q96M19 Y_RNA.813-201ENST00000364639 102 ntBASIC1.02□□□□□ -2.25
LINC00477Q96M19 Y_RNA.314-201ENST00000365114 102 ntBASIC1.02□□□□□ -2.25
LINC00477Q96M19 RNU6-1240P-201ENST00000365155 104 ntBASIC1.02□□□□□ -2.25
LINC00477Q96M19 MIR618-201ENST00000385287 98 ntBASIC1.02□□□□□ -2.25
LINC00477Q96M19 AL161935.2-201ENST00000414627 60 ntBASIC1.02□□□□□ -2.25
LINC00477Q96M19 EBAG9P1-201ENST00000418955 543 ntBASIC1.02□□□□□ -2.25
LINC00477Q96M19 MTND4P28-201ENST00000426217 387 ntBASIC1.02□□□□□ -2.25
LINC00477Q96M19 AL121890.1-201ENST00000435457 205 ntBASIC1.02□□□□□ -2.25
LINC00477Q96M19 RPEP5-201ENST00000441137 268 ntBASIC1.02□□□□□ -2.25
LINC00477Q96M19 RNU2-34P-201ENST00000516534 121 ntBASIC1.02□□□□□ -2.25
LINC00477Q96M19 RNU1-92P-201ENST00000517017 135 ntBASIC1.02□□□□□ -2.25
LINC00477Q96M19 RNU6-548P-201ENST00000517083 115 ntBASIC1.02□□□□□ -2.25
LINC00477Q96M19 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.02□□□□□ -2.25
LINC00477Q96M19 AC005899.2-201ENST00000584353 90 ntBASIC1.02□□□□□ -2.25
LINC00477Q96M19 AL929325.1-201ENST00000603096 117 ntBASIC1.02□□□□□ -2.25
LINC00477Q96M19 AL390123.1-201ENST00000603216 237 ntBASIC1.02□□□□□ -2.25
LINC00477Q96M19 AC069114.2-201ENST00000604699 304 ntBASIC1.02□□□□□ -2.25
LINC00477Q96M19 AL050343.2-201ENST00000607338 280 ntBASIC1.02□□□□□ -2.25
LINC00477Q96M19 AL021879.1-201ENST00000611756 288 ntBASIC1.02□□□□□ -2.25
LINC00477Q96M19 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.02□□□□□ -2.25
LINC00477Q96M19 AL121890.5-201ENST00000620848 304 ntBASIC1.02□□□□□ -2.25
LINC00477Q96M19 U6.92-201ENST00000636464 89 ntBASIC1.02□□□□□ -2.25
LINC00477Q96M19 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.02□□□□□ -2.25
LINC00477Q96M19 Y_RNA.138-201ENST00000363462 102 ntBASIC1.01□□□□□ -2.25
LINC00477Q96M19 Y_RNA.187-201ENST00000363918 113 ntBASIC1.01□□□□□ -2.25
LINC00477Q96M19 Y_RNA.216-201ENST00000364205 93 ntBASIC1.01□□□□□ -2.25
LINC00477Q96M19 RNU6-867P-201ENST00000364956 107 ntBASIC1.01□□□□□ -2.25
LINC00477Q96M19 SNORA70.7-201ENST00000384159 133 ntBASIC1.01□□□□□ -2.25
LINC00477Q96M19 RNY1P14-201ENST00000384426 108 ntBASIC1.01□□□□□ -2.25
LINC00477Q96M19 MIR194-1-201ENST00000384892 85 ntBASIC1.01□□□□□ -2.25
LINC00477Q96M19 SNORA69.1-201ENST00000390904 137 ntBASIC1.01□□□□□ -2.25
LINC00477Q96M19 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
LINC00477Q96M19 RNU6-130P-201ENST00000411112 103 ntBASIC1.01□□□□□ -2.25
LINC00477Q96M19 AC114482.1-201ENST00000418010 247 ntBASIC1.01□□□□□ -2.25
LINC00477Q96M19 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.01□□□□□ -2.25
LINC00477Q96M19 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.01□□□□□ -2.25
LINC00477Q96M19 PCNPP5-201ENST00000452246 481 ntBASIC1.01□□□□□ -2.25
LINC00477Q96M19 NDUFB4P10-201ENST00000452541 359 ntBASIC1.01□□□□□ -2.25
LINC00477Q96M19 RNU6-625P-201ENST00000459412 107 ntBASIC1.01□□□□□ -2.25
LINC00477Q96M19 RPL30P7-201ENST00000479312 323 ntBASIC1.01□□□□□ -2.25
LINC00477Q96M19 RNU6-1198P-201ENST00000516904 67 ntBASIC1.01□□□□□ -2.25
LINC00477Q96M19 AL442163.3-201ENST00000554110 156 ntBASIC1.01□□□□□ -2.25
LINC00477Q96M19 MIR4303-201ENST00000581299 66 ntBASIC1.01□□□□□ -2.25
LINC00477Q96M19 MIR5188-201ENST00000583467 113 ntBASIC1.01□□□□□ -2.25
LINC00477Q96M19 AC080078.3-201ENST00000605407 463 ntBASIC1.01□□□□□ -2.25
LINC00477Q96M19 AC004467.1-201ENST00000615678 330 ntBASIC1.01□□□□□ -2.25
LINC00477Q96M19 U6.73-201ENST00000619194 103 ntBASIC1.01□□□□□ -2.25
LINC00477Q96M19 U6.115-201ENST00000636045 103 ntBASIC1.01□□□□□ -2.25
LINC00477Q96M19 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1□□□□□ -2.25
LINC00477Q96M19 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
LINC00477Q96M19 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
LINC00477Q96M19 RNU6-271P-201ENST00000363858 105 ntBASIC1□□□□□ -2.25
LINC00477Q96M19 RNU5E-4P-201ENST00000364931 120 ntBASIC1□□□□□ -2.25
LINC00477Q96M19 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1□□□□□ -2.25
LINC00477Q96M19 RNU6-474P-201ENST00000384243 107 ntBASIC1□□□□□ -2.25
LINC00477Q96M19 MIR320B2-201ENST00000408479 138 ntBASIC1□□□□□ -2.25
LINC00477Q96M19 Y_RNA.595-201ENST00000410403 105 ntBASIC1□□□□□ -2.25
LINC00477Q96M19 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1□□□□□ -2.25
LINC00477Q96M19 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 142.2 ms