Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
CALR3Q96L12 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.56□□□□□ -1.84
CALR3Q96L12 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
CALR3Q96L12 SNORA33-201ENST00000363664 130 ntBASIC3.56□□□□□ -1.84
CALR3Q96L12 RNU6-1164P-201ENST00000364428 107 ntBASIC3.56□□□□□ -1.84
CALR3Q96L12 Y_RNA.267-201ENST00000364679 109 ntBASIC3.56□□□□□ -1.84
CALR3Q96L12 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CALR3Q96L12 MIR141-201ENST00000384975 95 ntBASIC3.56□□□□□ -1.84
CALR3Q96L12 SNORA26-201ENST00000391286 122 ntBASIC3.56□□□□□ -1.84
CALR3Q96L12 RPS29P7-201ENST00000439662 171 ntBASIC3.56□□□□□ -1.84
CALR3Q96L12 AC009220.1-201ENST00000451614 275 ntBASIC3.56□□□□□ -1.84
CALR3Q96L12 AL109933.2-201ENST00000452651 260 ntBASIC3.56□□□□□ -1.84
CALR3Q96L12 RNU7-197P-201ENST00000458836 62 ntBASIC3.56□□□□□ -1.84
CALR3Q96L12 RNU7-26P-201ENST00000458980 63 ntBASIC3.56□□□□□ -1.84
CALR3Q96L12 RPS26P45-201ENST00000471748 340 ntBASIC3.56□□□□□ -1.84
CALR3Q96L12 OR9P1P-201ENST00000496431 281 ntBASIC3.56□□□□□ -1.84
CALR3Q96L12 RNU6-56P-201ENST00000516986 93 ntBASIC3.56□□□□□ -1.84
CALR3Q96L12 MIR3169-201ENST00000578032 83 ntBASIC3.56□□□□□ -1.84
CALR3Q96L12 MIR4662B-201ENST00000579498 81 ntBASIC3.56□□□□□ -1.84
CALR3Q96L12 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
CALR3Q96L12 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
CALR3Q96L12 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
CALR3Q96L12 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CALR3Q96L12 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CALR3Q96L12 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
CALR3Q96L12 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.55□□□□□ -1.84
CALR3Q96L12 RNU6-862P-201ENST00000362804 105 ntBASIC3.55□□□□□ -1.84
CALR3Q96L12 Y_RNA.420-201ENST00000384043 110 ntBASIC3.55□□□□□ -1.84
CALR3Q96L12 SNORA20-201ENST00000384662 132 ntBASIC3.55□□□□□ -1.84
CALR3Q96L12 MIR29C-201ENST00000385231 88 ntBASIC3.55□□□□□ -1.84
CALR3Q96L12 RNU6-588P-201ENST00000410281 105 ntBASIC3.55□□□□□ -1.84
CALR3Q96L12 RPL32P35-201ENST00000415214 394 ntBASIC3.55□□□□□ -1.84
CALR3Q96L12 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
CALR3Q96L12 MTND4LP9-201ENST00000427694 174 ntBASIC3.55□□□□□ -1.84
CALR3Q96L12 CST9LP2-201ENST00000437612 320 ntBASIC3.55□□□□□ -1.84
CALR3Q96L12 AL049873.1-201ENST00000480540 376 ntBASIC3.55□□□□□ -1.84
CALR3Q96L12 RNA5SP217-201ENST00000515959 91 ntBASIC3.55□□□□□ -1.84
CALR3Q96L12 SNORA70.18-201ENST00000516696 98 ntBASIC3.55□□□□□ -1.84
CALR3Q96L12 RNU7-149P-201ENST00000516739 59 ntBASIC3.55□□□□□ -1.84
CALR3Q96L12 SCARNA20.6-201ENST00000517251 106 ntBASIC3.55□□□□□ -1.84
CALR3Q96L12 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.55□□□□□ -1.84
CALR3Q96L12 AC120024.3-201ENST00000603167 156 ntBASIC3.55□□□□□ -1.84
CALR3Q96L12 uc_338.1-201ENST00000612113 180 ntBASIC3.55□□□□□ -1.84
CALR3Q96L12 Pinc.1-201ENST00000616452 154 ntBASIC3.55□□□□□ -1.84
CALR3Q96L12 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.55□□□□□ -1.84
CALR3Q96L12 AC008264.2-201ENST00000610193 3731 ntBASIC3.55□□□□□ -1.84
CALR3Q96L12 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CALR3Q96L12 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CALR3Q96L12 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CALR3Q96L12 SNORD56.5-201ENST00000364281 72 ntBASIC3.54□□□□□ -1.84
CALR3Q96L12 Y_RNA.253-201ENST00000364562 112 ntBASIC3.54□□□□□ -1.84
CALR3Q96L12 RNU6-1138P-201ENST00000365359 106 ntBASIC3.54□□□□□ -1.84
CALR3Q96L12 RNU6-22P-201ENST00000384355 107 ntBASIC3.54□□□□□ -1.84
CALR3Q96L12 AC245047.4-201ENST00000433189 144 ntBASIC3.54□□□□□ -1.84
CALR3Q96L12 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.54□□□□□ -1.84
CALR3Q96L12 AC092991.1-201ENST00000477176 376 ntBASIC3.54□□□□□ -1.84
CALR3Q96L12 RNU1-143P-201ENST00000516296 146 ntBASIC3.54□□□□□ -1.84
CALR3Q96L12 U1.23-201ENST00000610293 146 ntBASIC3.54□□□□□ -1.84
CALR3Q96L12 RNU1-68P-201ENST00000615382 146 ntBASIC3.54□□□□□ -1.84
CALR3Q96L12 U1.39-201ENST00000621562 146 ntBASIC3.54□□□□□ -1.84
CALR3Q96L12 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CALR3Q96L12 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CALR3Q96L12 SNORD115-3-201ENST00000363100 82 ntBASIC3.53□□□□□ -1.84
CALR3Q96L12 RNU6-978P-201ENST00000364371 103 ntBASIC3.53□□□□□ -1.84
CALR3Q96L12 Y_RNA.634-201ENST00000364811 113 ntBASIC3.53□□□□□ -1.84
CALR3Q96L12 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.53□□□□□ -1.84
CALR3Q96L12 SNRPGP10-201ENST00000432323 225 ntBASIC3.53□□□□□ -1.84
CALR3Q96L12 AL163195.1-201ENST00000496941 348 ntBASIC3.53□□□□□ -1.84
CALR3Q96L12 MIR3126-201ENST00000577443 74 ntBASIC3.53□□□□□ -1.84
CALR3Q96L12 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.53□□□□□ -1.84
CALR3Q96L12 AC097639.2-201ENST00000603159 172 ntBASIC3.53□□□□□ -1.84
CALR3Q96L12 AC245060.5-201ENST00000610778 3293 ntBASIC3.53□□□□□ -1.84
CALR3Q96L12 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CALR3Q96L12 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
CALR3Q96L12 SNORA25.7-201ENST00000364375 127 ntBASIC3.52□□□□□ -1.85
CALR3Q96L12 RNU1-91P-201ENST00000364746 163 ntBASIC3.52□□□□□ -1.85
CALR3Q96L12 AC004975.1-201ENST00000428733 208 ntBASIC3.52□□□□□ -1.85
CALR3Q96L12 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.52□□□□□ -1.85
CALR3Q96L12 RN7SL385P-201ENST00000468873 276 ntBASIC3.52□□□□□ -1.85
CALR3Q96L12 RNU6-479P-201ENST00000516348 105 ntBASIC3.52□□□□□ -1.85
CALR3Q96L12 AC245166.1-201ENST00000521012 253 ntBASIC3.52□□□□□ -1.85
CALR3Q96L12 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.52□□□□□ -1.85
CALR3Q96L12 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.52□□□□□ -1.85
CALR3Q96L12 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CALR3Q96L12 Y_RNA.91-201ENST00000363042 107 ntBASIC3.51□□□□□ -1.85
CALR3Q96L12 SNORA38-201ENST00000363946 132 ntBASIC3.51□□□□□ -1.85
CALR3Q96L12 RNU6-1082P-201ENST00000364574 107 ntBASIC3.51□□□□□ -1.85
CALR3Q96L12 RNU2-51P-201ENST00000410708 197 ntBASIC3.51□□□□□ -1.85
CALR3Q96L12 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.51□□□□□ -1.85
CALR3Q96L12 AC090142.3-201ENST00000519012 385 ntBASIC3.51□□□□□ -1.85
CALR3Q96L12 AP002004.2-201ENST00000531656 154 ntBASIC3.51□□□□□ -1.85
CALR3Q96L12 MIR378J-201ENST00000611988 109 ntBASIC3.51□□□□□ -1.85
CALR3Q96L12 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.51□□□□□ -1.85
CALR3Q96L12 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.51□□□□□ -1.85
CALR3Q96L12 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
CALR3Q96L12 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
CALR3Q96L12 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
CALR3Q96L12 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
CALR3Q96L12 RNU1-58P-201ENST00000362413 163 ntBASIC3.5□□□□□ -1.85
CALR3Q96L12 RNU1-148P-201ENST00000384472 162 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms