Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 SNORD74.4-201ENST00000364129 80 ntBASIC4.18□□□□□ -1.74
LRCH3Q96II8 RNU4-67P-201ENST00000364569 141 ntBASIC4.18□□□□□ -1.74
LRCH3Q96II8 RNU4-16P-201ENST00000364737 141 ntBASIC4.18□□□□□ -1.74
LRCH3Q96II8 RNA5SP167-201ENST00000365461 116 ntBASIC4.18□□□□□ -1.74
LRCH3Q96II8 RNU6-438P-201ENST00000365561 103 ntBASIC4.18□□□□□ -1.74
LRCH3Q96II8 RNU6-198P-201ENST00000384258 104 ntBASIC4.18□□□□□ -1.74
LRCH3Q96II8 SNORD38C-201ENST00000384381 69 ntBASIC4.18□□□□□ -1.74
LRCH3Q96II8 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
LRCH3Q96II8 Y_RNA.611-201ENST00000410682 108 ntBASIC4.18□□□□□ -1.74
LRCH3Q96II8 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.18□□□□□ -1.74
LRCH3Q96II8 AL353813.1-201ENST00000440700 253 ntBASIC4.18□□□□□ -1.74
LRCH3Q96II8 Y_RNA.705-201ENST00000516862 110 ntBASIC4.18□□□□□ -1.74
LRCH3Q96II8 AC011266.1-201ENST00000624119 3569 ntBASIC4.18□□□□□ -1.74
LRCH3Q96II8 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
LRCH3Q96II8 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
LRCH3Q96II8 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
LRCH3Q96II8 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.17□□□□□ -1.74
LRCH3Q96II8 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC4.17□□□□□ -1.74
LRCH3Q96II8 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.17□□□□□ -1.74
LRCH3Q96II8 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
LRCH3Q96II8 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
LRCH3Q96II8 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
LRCH3Q96II8 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
LRCH3Q96II8 RNU1-96P-201ENST00000364163 162 ntBASIC4.17□□□□□ -1.74
LRCH3Q96II8 SNORD45B-201ENST00000364617 72 ntBASIC4.17□□□□□ -1.74
LRCH3Q96II8 RNU6-887P-201ENST00000410660 100 ntBASIC4.17□□□□□ -1.74
LRCH3Q96II8 Z98742.2-201ENST00000431564 187 ntBASIC4.17□□□□□ -1.74
LRCH3Q96II8 AP000867.2-201ENST00000532468 320 ntBASIC4.17□□□□□ -1.74
LRCH3Q96II8 AC006023.1-201ENST00000603944 259 ntBASIC4.17□□□□□ -1.74
LRCH3Q96II8 AC064859.1-201ENST00000624741 174 ntBASIC4.17□□□□□ -1.74
LRCH3Q96II8 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC4.17□□□□□ -1.74
LRCH3Q96II8 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
LRCH3Q96II8 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
LRCH3Q96II8 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
LRCH3Q96II8 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC4.17□□□□□ -1.74
LRCH3Q96II8 AC017071.1-201ENST00000564407 2204 ntBASIC4.17□□□□□ -1.74
LRCH3Q96II8 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
LRCH3Q96II8 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
LRCH3Q96II8 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
LRCH3Q96II8 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.16□□□□□ -1.74
LRCH3Q96II8 MIR449A-201ENST00000362113 91 ntBASIC4.16□□□□□ -1.74
LRCH3Q96II8 Y_RNA.4-201ENST00000362333 112 ntBASIC4.16□□□□□ -1.74
LRCH3Q96II8 Y_RNA.95-201ENST00000363079 95 ntBASIC4.16□□□□□ -1.74
LRCH3Q96II8 RNY1P4-201ENST00000384595 115 ntBASIC4.16□□□□□ -1.74
LRCH3Q96II8 MIR802-201ENST00000390235 94 ntBASIC4.16□□□□□ -1.74
LRCH3Q96II8 AC004552.1-201ENST00000419089 348 ntBASIC4.16□□□□□ -1.74
LRCH3Q96II8 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.16□□□□□ -1.74
LRCH3Q96II8 RPS26P3-201ENST00000470205 348 ntBASIC4.16□□□□□ -1.74
LRCH3Q96II8 AC090543.2-201ENST00000483963 348 ntBASIC4.16□□□□□ -1.74
LRCH3Q96II8 AC004057.1-201ENST00000485827 348 ntBASIC4.16□□□□□ -1.74
LRCH3Q96II8 RNU2-27P-201ENST00000516185 142 ntBASIC4.16□□□□□ -1.74
LRCH3Q96II8 AC022695.1-201ENST00000522089 237 ntBASIC4.16□□□□□ -1.74
LRCH3Q96II8 AC002984.1-201ENST00000591692 448 ntBASIC4.16□□□□□ -1.74
LRCH3Q96II8 MIR7112-201ENST00000616126 65 ntBASIC4.16□□□□□ -1.74
LRCH3Q96II8 AC091932.4-201ENST00000623386 200 ntBASIC4.16□□□□□ -1.74
LRCH3Q96II8 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.74
LRCH3Q96II8 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.15□□□□□ -1.74
LRCH3Q96II8 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
LRCH3Q96II8 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
LRCH3Q96II8 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.15□□□□□ -1.74
LRCH3Q96II8 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
LRCH3Q96II8 RNA5SP374-201ENST00000362939 125 ntBASIC4.15□□□□□ -1.75
LRCH3Q96II8 Y_RNA.351-201ENST00000365436 96 ntBASIC4.15□□□□□ -1.75
LRCH3Q96II8 Y_RNA.467-201ENST00000384297 102 ntBASIC4.15□□□□□ -1.75
LRCH3Q96II8 MIR1253-201ENST00000408273 105 ntBASIC4.15□□□□□ -1.75
LRCH3Q96II8 RNA5SP39-201ENST00000411245 120 ntBASIC4.15□□□□□ -1.75
LRCH3Q96II8 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.15□□□□□ -1.75
LRCH3Q96II8 AC099677.2-201ENST00000436385 175 ntBASIC4.15□□□□□ -1.75
LRCH3Q96II8 AC069285.2-201ENST00000440210 275 ntBASIC4.15□□□□□ -1.75
LRCH3Q96II8 RPS23P4-201ENST00000487908 423 ntBASIC4.15□□□□□ -1.75
LRCH3Q96II8 AC025554.1-201ENST00000505641 188 ntBASIC4.15□□□□□ -1.75
LRCH3Q96II8 Y_RNA.714-201ENST00000517065 90 ntBASIC4.15□□□□□ -1.75
LRCH3Q96II8 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.15□□□□□ -1.75
LRCH3Q96II8 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.15□□□□□ -1.75
LRCH3Q96II8 AC006441.5-201ENST00000612680 209 ntBASIC4.15□□□□□ -1.75
LRCH3Q96II8 AC095038.3-201ENST00000634439 195 ntBASIC4.15□□□□□ -1.75
LRCH3Q96II8 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
LRCH3Q96II8 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
LRCH3Q96II8 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
LRCH3Q96II8 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
LRCH3Q96II8 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.15□□□□□ -1.75
LRCH3Q96II8 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
LRCH3Q96II8 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
LRCH3Q96II8 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
LRCH3Q96II8 RNU6-743P-201ENST00000364151 106 ntBASIC4.14□□□□□ -1.75
LRCH3Q96II8 Y_RNA.547-201ENST00000384654 119 ntBASIC4.14□□□□□ -1.75
LRCH3Q96II8 MIR522-201ENST00000385071 87 ntBASIC4.14□□□□□ -1.75
LRCH3Q96II8 RNU6-1186P-201ENST00000410429 97 ntBASIC4.14□□□□□ -1.75
LRCH3Q96II8 AL445646.1-201ENST00000431784 216 ntBASIC4.14□□□□□ -1.75
LRCH3Q96II8 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.14□□□□□ -1.75
LRCH3Q96II8 RAC1P2-201ENST00000511164 579 ntBASIC4.14□□□□□ -1.75
LRCH3Q96II8 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC4.14□□□□□ -1.75
LRCH3Q96II8 U2.20-201ENST00000613956 192 ntBASIC4.14□□□□□ -1.75
LRCH3Q96II8 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
LRCH3Q96II8 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
LRCH3Q96II8 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
LRCH3Q96II8 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.14□□□□□ -1.75
LRCH3Q96II8 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
LRCH3Q96II8 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.13□□□□□ -1.75
LRCH3Q96II8 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 161.1 ms