Protein–RNA interactions for Protein: Q96DD7

SHISA4, Protein shisa-4, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4Q96DD7 RNU6-460P-201ENST00000391158 108 ntBASIC3.21□□□□□ -1.9
SHISA4Q96DD7 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.21□□□□□ -1.9
SHISA4Q96DD7 RNU2-56P-201ENST00000516826 190 ntBASIC3.21□□□□□ -1.9
SHISA4Q96DD7 AC015712.3-201ENST00000559380 164 ntBASIC3.21□□□□□ -1.9
SHISA4Q96DD7 U7.2-201ENST00000607576 63 ntBASIC3.21□□□□□ -1.9
SHISA4Q96DD7 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.21□□□□□ -1.9
SHISA4Q96DD7 AL138880.2-201ENST00000616214 239 ntBASIC3.21□□□□□ -1.9
SHISA4Q96DD7 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SHISA4Q96DD7 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
SHISA4Q96DD7 snoU2_19.1-201ENST00000362361 80 ntBASIC3.2□□□□□ -1.9
SHISA4Q96DD7 U8.7-201ENST00000364940 136 ntBASIC3.2□□□□□ -1.9
SHISA4Q96DD7 AC009969.1-201ENST00000438726 172 ntBASIC3.2□□□□□ -1.9
SHISA4Q96DD7 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.2□□□□□ -1.9
SHISA4Q96DD7 AC010099.1-201ENST00000455434 375 ntBASIC3.2□□□□□ -1.9
SHISA4Q96DD7 AC112771.1-201ENST00000463581 102 ntBASIC3.2□□□□□ -1.9
SHISA4Q96DD7 RNU6-561P-201ENST00000516222 102 ntBASIC3.2□□□□□ -1.9
SHISA4Q96DD7 AP000867.2-201ENST00000532468 320 ntBASIC3.2□□□□□ -1.9
SHISA4Q96DD7 AC107016.2-201ENST00000547968 190 ntBASIC3.2□□□□□ -1.9
SHISA4Q96DD7 MIR548AY-201ENST00000617669 107 ntBASIC3.2□□□□□ -1.9
SHISA4Q96DD7 AC068647.2-201ENST00000637380 353 ntBASIC3.2□□□□□ -1.9
SHISA4Q96DD7 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
SHISA4Q96DD7 ZNF702P-202ENST00000434269 1966 ntBASIC3.2□□□□□ -1.9
SHISA4Q96DD7 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.19□□□□□ -1.9
SHISA4Q96DD7 MIR518C-201ENST00000384822 101 ntBASIC3.19□□□□□ -1.9
SHISA4Q96DD7 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SHISA4Q96DD7 SNORA75.5-201ENST00000391291 81 ntBASIC3.19□□□□□ -1.9
SHISA4Q96DD7 AL138827.1-201ENST00000402666 306 ntBASIC3.19□□□□□ -1.9
SHISA4Q96DD7 SNORA79-201ENST00000408376 140 ntBASIC3.19□□□□□ -1.9
SHISA4Q96DD7 MIR1185-2-201ENST00000408687 86 ntBASIC3.19□□□□□ -1.9
SHISA4Q96DD7 RNU6-588P-201ENST00000410281 105 ntBASIC3.19□□□□□ -1.9
SHISA4Q96DD7 SNORA36B-201ENST00000410438 131 ntBASIC3.19□□□□□ -1.9
SHISA4Q96DD7 RNU4-43P-201ENST00000410628 137 ntBASIC3.19□□□□□ -1.9
SHISA4Q96DD7 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.19□□□□□ -1.9
SHISA4Q96DD7 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.19□□□□□ -1.9
SHISA4Q96DD7 RPL36AP48-201ENST00000485521 314 ntBASIC3.19□□□□□ -1.9
SHISA4Q96DD7 AC117454.1-201ENST00000491120 168 ntBASIC3.19□□□□□ -1.9
SHISA4Q96DD7 RNA5SP76-201ENST00000516277 87 ntBASIC3.19□□□□□ -1.9
SHISA4Q96DD7 RNU7-115P-201ENST00000516433 55 ntBASIC3.19□□□□□ -1.9
SHISA4Q96DD7 AC109329.2-201ENST00000519658 482 ntBASIC3.19□□□□□ -1.9
SHISA4Q96DD7 AC093331.1-201ENST00000521474 169 ntBASIC3.19□□□□□ -1.9
SHISA4Q96DD7 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.19□□□□□ -1.9
SHISA4Q96DD7 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.19□□□□□ -1.9
SHISA4Q96DD7 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
SHISA4Q96DD7 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SHISA4Q96DD7 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.19□□□□□ -1.9
SHISA4Q96DD7 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
SHISA4Q96DD7 AL159152.1-201ENST00000635019 2587 ntBASIC3.18□□□□□ -1.9
SHISA4Q96DD7 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
SHISA4Q96DD7 RNU6-1298P-201ENST00000362456 101 ntBASIC3.18□□□□□ -1.9
SHISA4Q96DD7 RNU6-482P-201ENST00000391068 107 ntBASIC3.18□□□□□ -1.9
SHISA4Q96DD7 MIR873-201ENST00000401120 77 ntBASIC3.18□□□□□ -1.9
SHISA4Q96DD7 MIR1289-2-201ENST00000408360 111 ntBASIC3.18□□□□□ -1.9
SHISA4Q96DD7 RNU6-383P-201ENST00000410864 94 ntBASIC3.18□□□□□ -1.9
SHISA4Q96DD7 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC3.18□□□□□ -1.9
SHISA4Q96DD7 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.18□□□□□ -1.9
SHISA4Q96DD7 AC010154.1-201ENST00000425857 269 ntBASIC3.18□□□□□ -1.9
SHISA4Q96DD7 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.18□□□□□ -1.9
SHISA4Q96DD7 TRIAP1P1-201ENST00000427062 225 ntBASIC3.18□□□□□ -1.9
SHISA4Q96DD7 AL591806.2-201ENST00000433122 173 ntBASIC3.18□□□□□ -1.9
SHISA4Q96DD7 HSPE1P13-201ENST00000451143 297 ntBASIC3.18□□□□□ -1.9
SHISA4Q96DD7 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.18□□□□□ -1.9
SHISA4Q96DD7 RAC1P5-201ENST00000512182 576 ntBASIC3.18□□□□□ -1.9
SHISA4Q96DD7 IGKV3-31-201ENST00000523109 329 ntBASIC3.18□□□□□ -1.9
SHISA4Q96DD7 AC090049.2-201ENST00000550377 109 ntBASIC3.18□□□□□ -1.9
SHISA4Q96DD7 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.18□□□□□ -1.9
SHISA4Q96DD7 DEFB122-202ENST00000569013 197 ntBASIC3.18□□□□□ -1.9
SHISA4Q96DD7 AL670379.2-201ENST00000604983 252 ntBASIC3.18□□□□□ -1.9
SHISA4Q96DD7 uc_338.14-201ENST00000613162 166 ntBASIC3.18□□□□□ -1.9
SHISA4Q96DD7 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.18□□□□□ -1.9
SHISA4Q96DD7 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
SHISA4Q96DD7 AC131280.1-202ENST00000624067 4211 ntBASIC3.17□□□□□ -1.9
SHISA4Q96DD7 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.17□□□□□ -1.9
SHISA4Q96DD7 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
SHISA4Q96DD7 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
SHISA4Q96DD7 RNU6-1064P-201ENST00000410626 104 ntBASIC3.17□□□□□ -1.9
SHISA4Q96DD7 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.17□□□□□ -1.9
SHISA4Q96DD7 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC3.17□□□□□ -1.9
SHISA4Q96DD7 AC108210.2-201ENST00000503681 201 ntBASIC3.17□□□□□ -1.9
SHISA4Q96DD7 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.17□□□□□ -1.9
SHISA4Q96DD7 AC079598.5-201ENST00000547460 117 ntBASIC3.17□□□□□ -1.9
SHISA4Q96DD7 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.17□□□□□ -1.9
SHISA4Q96DD7 AC012640.5-201ENST00000623897 319 ntBASIC3.17□□□□□ -1.9
SHISA4Q96DD7 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
SHISA4Q96DD7 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
SHISA4Q96DD7 RNU6-271P-201ENST00000363858 105 ntBASIC3.16□□□□□ -1.9
SHISA4Q96DD7 SNORA51.4-201ENST00000364993 124 ntBASIC3.16□□□□□ -1.9
SHISA4Q96DD7 SNORA12-201ENST00000391162 147 ntBASIC3.16□□□□□ -1.9
SHISA4Q96DD7 RN7SKP192-201ENST00000411291 327 ntBASIC3.16□□□□□ -1.9
SHISA4Q96DD7 RPL23AP7-203ENST00000449021 469 ntBASIC3.16□□□□□ -1.9
SHISA4Q96DD7 PDCD5P2-201ENST00000507570 312 ntBASIC3.16□□□□□ -1.9
SHISA4Q96DD7 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.16□□□□□ -1.9
SHISA4Q96DD7 RNU5F-4P-201ENST00000516581 114 ntBASIC3.16□□□□□ -1.9
SHISA4Q96DD7 RNU7-116P-201ENST00000516940 62 ntBASIC3.16□□□□□ -1.9
SHISA4Q96DD7 AC090142.3-201ENST00000519012 385 ntBASIC3.16□□□□□ -1.9
SHISA4Q96DD7 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.16□□□□□ -1.9
SHISA4Q96DD7 AC010680.1-201ENST00000590024 3590 ntBASIC3.16□□□□□ -1.9
SHISA4Q96DD7 AC103988.1-201ENST00000566382 2177 ntBASIC3.16□□□□□ -1.9
SHISA4Q96DD7 CENPCP1-201ENST00000533085 2578 ntBASIC3.16□□□□□ -1.9
SHISA4Q96DD7 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SHISA4Q96DD7 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms