Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 MIR764-201ENST00000390811 85 ntBASIC1.89□□□□□ -2.11
BEST3Q8N1M1 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.89□□□□□ -2.11
BEST3Q8N1M1 RNU2-2P-201ENST00000410396 191 ntBASIC1.89□□□□□ -2.11
BEST3Q8N1M1 AL139156.1-201ENST00000412785 841 ntBASIC1.89□□□□□ -2.11
BEST3Q8N1M1 HMGN2P38-201ENST00000423806 265 ntBASIC1.89□□□□□ -2.11
BEST3Q8N1M1 AL591806.2-201ENST00000433122 173 ntBASIC1.89□□□□□ -2.11
BEST3Q8N1M1 HMGN2P34-201ENST00000437647 269 ntBASIC1.89□□□□□ -2.11
BEST3Q8N1M1 IPO7P1-201ENST00000442031 636 ntBASIC1.89□□□□□ -2.11
BEST3Q8N1M1 AC010655.3-201ENST00000478818 450 ntBASIC1.89□□□□□ -2.11
BEST3Q8N1M1 MRPS35P2-201ENST00000508242 191 ntBASIC1.89□□□□□ -2.11
BEST3Q8N1M1 RNU6-1046P-201ENST00000516538 107 ntBASIC1.89□□□□□ -2.11
BEST3Q8N1M1 AL360085.1-201ENST00000604713 532 ntBASIC1.89□□□□□ -2.11
BEST3Q8N1M1 AC005828.6-201ENST00000606610 232 ntBASIC1.89□□□□□ -2.11
BEST3Q8N1M1 MIR376A1-201ENST00000616574 68 ntBASIC1.89□□□□□ -2.11
BEST3Q8N1M1 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.88□□□□□ -2.11
BEST3Q8N1M1 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
BEST3Q8N1M1 AL356292.1-201ENST00000283110 373 ntBASIC1.88□□□□□ -2.11
BEST3Q8N1M1 SNORD114-7-201ENST00000362520 77 ntBASIC1.88□□□□□ -2.11
BEST3Q8N1M1 RNU6-271P-201ENST00000363858 105 ntBASIC1.88□□□□□ -2.11
BEST3Q8N1M1 RNU6-770P-201ENST00000363929 105 ntBASIC1.88□□□□□ -2.11
BEST3Q8N1M1 Y_RNA.214-201ENST00000364201 112 ntBASIC1.88□□□□□ -2.11
BEST3Q8N1M1 SNORA20B-201ENST00000384220 132 ntBASIC1.88□□□□□ -2.11
BEST3Q8N1M1 MIR515-2-201ENST00000384883 83 ntBASIC1.88□□□□□ -2.11
BEST3Q8N1M1 MIR515-1-201ENST00000384884 83 ntBASIC1.88□□□□□ -2.11
BEST3Q8N1M1 SNORD115-46-201ENST00000390982 71 ntBASIC1.88□□□□□ -2.11
BEST3Q8N1M1 AL117342.1-201ENST00000404861 406 ntBASIC1.88□□□□□ -2.11
BEST3Q8N1M1 RNU2-20P-201ENST00000410425 191 ntBASIC1.88□□□□□ -2.11
BEST3Q8N1M1 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
BEST3Q8N1M1 CST2P1-201ENST00000425770 87 ntBASIC1.88□□□□□ -2.11
BEST3Q8N1M1 AC005042.3-201ENST00000453230 174 ntBASIC1.88□□□□□ -2.11
BEST3Q8N1M1 MTND5P22-201ENST00000458380 195 ntBASIC1.88□□□□□ -2.11
BEST3Q8N1M1 snoU13.23-201ENST00000458863 104 ntBASIC1.88□□□□□ -2.11
BEST3Q8N1M1 AC025033.1-201ENST00000463883 194 ntBASIC1.88□□□□□ -2.11
BEST3Q8N1M1 RNU6-327P-201ENST00000516270 127 ntBASIC1.88□□□□□ -2.11
BEST3Q8N1M1 RNU6-155P-201ENST00000516347 100 ntBASIC1.88□□□□□ -2.11
BEST3Q8N1M1 RNU7-110P-201ENST00000516891 62 ntBASIC1.88□□□□□ -2.11
BEST3Q8N1M1 RNA5SP364-201ENST00000516938 78 ntBASIC1.88□□□□□ -2.11
BEST3Q8N1M1 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.88□□□□□ -2.11
BEST3Q8N1M1 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.88□□□□□ -2.11
BEST3Q8N1M1 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.88□□□□□ -2.11
BEST3Q8N1M1 AL137100.2-201ENST00000555786 315 ntBASIC1.88□□□□□ -2.11
BEST3Q8N1M1 AC136932.1-201ENST00000574771 208 ntBASIC1.88□□□□□ -2.11
BEST3Q8N1M1 MIR5002-201ENST00000584713 97 ntBASIC1.88□□□□□ -2.11
BEST3Q8N1M1 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.88□□□□□ -2.11
BEST3Q8N1M1 AC022513.1-201ENST00000624512 117 ntBASIC1.88□□□□□ -2.11
BEST3Q8N1M1 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
BEST3Q8N1M1 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
BEST3Q8N1M1 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
BEST3Q8N1M1 RNU6-862P-201ENST00000362804 105 ntBASIC1.87□□□□□ -2.11
BEST3Q8N1M1 Y_RNA.287-201ENST00000364853 94 ntBASIC1.87□□□□□ -2.11
BEST3Q8N1M1 RNU6-21P-201ENST00000384710 107 ntBASIC1.87□□□□□ -2.11
BEST3Q8N1M1 RNU6-417P-201ENST00000384712 107 ntBASIC1.87□□□□□ -2.11
BEST3Q8N1M1 SNORA48.1-201ENST00000390879 135 ntBASIC1.87□□□□□ -2.11
BEST3Q8N1M1 AL355796.1-201ENST00000406706 323 ntBASIC1.87□□□□□ -2.11
BEST3Q8N1M1 ELOCP20-201ENST00000422460 345 ntBASIC1.87□□□□□ -2.11
BEST3Q8N1M1 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.87□□□□□ -2.11
BEST3Q8N1M1 AL021397.1-201ENST00000451806 248 ntBASIC1.87□□□□□ -2.11
BEST3Q8N1M1 SEPT14P8-201ENST00000508026 178 ntBASIC1.87□□□□□ -2.11
BEST3Q8N1M1 RNY3P15-201ENST00000516297 97 ntBASIC1.87□□□□□ -2.11
BEST3Q8N1M1 DEFB122-202ENST00000569013 197 ntBASIC1.87□□□□□ -2.11
BEST3Q8N1M1 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.87□□□□□ -2.11
BEST3Q8N1M1 MIR4300-201ENST00000581016 96 ntBASIC1.87□□□□□ -2.11
BEST3Q8N1M1 SNORD113-5-201ENST00000607261 78 ntBASIC1.87□□□□□ -2.11
BEST3Q8N1M1 AC131280.1-202ENST00000624067 4211 ntBASIC1.86□□□□□ -2.11
BEST3Q8N1M1 CENPCP1-201ENST00000533085 2578 ntBASIC1.86□□□□□ -2.11
BEST3Q8N1M1 Y_RNA.19-201ENST00000362462 99 ntBASIC1.86□□□□□ -2.11
BEST3Q8N1M1 SNORD115-30-201ENST00000364117 82 ntBASIC1.86□□□□□ -2.11
BEST3Q8N1M1 RNU1-96P-201ENST00000364163 162 ntBASIC1.86□□□□□ -2.11
BEST3Q8N1M1 Y_RNA.331-201ENST00000365267 102 ntBASIC1.86□□□□□ -2.11
BEST3Q8N1M1 RPL21P1-201ENST00000399532 476 ntBASIC1.86□□□□□ -2.11
BEST3Q8N1M1 RNA5SP338-201ENST00000410495 85 ntBASIC1.86□□□□□ -2.11
BEST3Q8N1M1 RNA5SP501-201ENST00000410990 112 ntBASIC1.86□□□□□ -2.11
BEST3Q8N1M1 RNU6-1199P-201ENST00000411249 104 ntBASIC1.86□□□□□ -2.11
BEST3Q8N1M1 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.86□□□□□ -2.11
BEST3Q8N1M1 MTND2P23-201ENST00000422990 651 ntBASIC1.86□□□□□ -2.11
BEST3Q8N1M1 AC099677.2-201ENST00000436385 175 ntBASIC1.86□□□□□ -2.11
BEST3Q8N1M1 AL118496.2-201ENST00000448300 230 ntBASIC1.86□□□□□ -2.11
BEST3Q8N1M1 RPL23AP7-203ENST00000449021 469 ntBASIC1.86□□□□□ -2.11
BEST3Q8N1M1 RPL23AP42-201ENST00000471152 471 ntBASIC1.86□□□□□ -2.11
BEST3Q8N1M1 AC108210.2-201ENST00000503681 201 ntBASIC1.86□□□□□ -2.11
BEST3Q8N1M1 AC025465.3-201ENST00000510570 311 ntBASIC1.86□□□□□ -2.11
BEST3Q8N1M1 RNU6-1045P-201ENST00000516321 107 ntBASIC1.86□□□□□ -2.11
BEST3Q8N1M1 MIR4769-201ENST00000584126 77 ntBASIC1.86□□□□□ -2.11
BEST3Q8N1M1 AC136443.5-201ENST00000603741 370 ntBASIC1.86□□□□□ -2.11
BEST3Q8N1M1 PRR13P7-201ENST00000605538 430 ntBASIC1.86□□□□□ -2.11
BEST3Q8N1M1 SDR42E1P4-201ENST00000620894 481 ntBASIC1.86□□□□□ -2.11
BEST3Q8N1M1 AC008555.8-201ENST00000623602 2168 ntBASIC1.85□□□□□ -2.11
BEST3Q8N1M1 SNORA27.1-201ENST00000362604 124 ntBASIC1.85□□□□□ -2.11
BEST3Q8N1M1 SNORA16B-201ENST00000364674 135 ntBASIC1.85□□□□□ -2.11
BEST3Q8N1M1 Y_RNA.361-201ENST00000365515 120 ntBASIC1.85□□□□□ -2.11
BEST3Q8N1M1 Y_RNA.459-201ENST00000384251 102 ntBASIC1.85□□□□□ -2.11
BEST3Q8N1M1 RNU6-1109P-201ENST00000391187 107 ntBASIC1.85□□□□□ -2.11
BEST3Q8N1M1 MIR873-201ENST00000401120 77 ntBASIC1.85□□□□□ -2.11
BEST3Q8N1M1 U3.40-201ENST00000408706 208 ntBASIC1.85□□□□□ -2.11
BEST3Q8N1M1 AC010154.1-201ENST00000425857 269 ntBASIC1.85□□□□□ -2.11
BEST3Q8N1M1 AL731563.1-201ENST00000442202 214 ntBASIC1.85□□□□□ -2.11
BEST3Q8N1M1 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.85□□□□□ -2.11
BEST3Q8N1M1 LINC01399-202ENST00000458450 244 ntBASIC1.85□□□□□ -2.11
BEST3Q8N1M1 RPS27P22-201ENST00000478056 241 ntBASIC1.85□□□□□ -2.11
BEST3Q8N1M1 SNORA70.12-201ENST00000516084 153 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 167.3 ms