Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 MTCO3P19-201ENST00000415864 321 ntBASIC2.36□□□□□ -2.03
DDR1Q08345 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.36□□□□□ -2.03
DDR1Q08345 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.36□□□□□ -2.03
DDR1Q08345 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.36□□□□□ -2.03
DDR1Q08345 SCARNA24.2-201ENST00000516968 130 ntBASIC2.36□□□□□ -2.03
DDR1Q08345 AL137100.2-201ENST00000555786 315 ntBASIC2.36□□□□□ -2.03
DDR1Q08345 AC011476.5-201ENST00000615594 130 ntBASIC2.36□□□□□ -2.03
DDR1Q08345 MIR376A1-201ENST00000616574 68 ntBASIC2.36□□□□□ -2.03
DDR1Q08345 AC090517.3-201ENST00000625170 141 ntBASIC2.36□□□□□ -2.03
DDR1Q08345 AL391987.6-201ENST00000305671 199 ntBASIC2.35□□□□□ -2.03
DDR1Q08345 Y_RNA.143-201ENST00000363520 106 ntBASIC2.35□□□□□ -2.03
DDR1Q08345 RNU6-318P-201ENST00000384283 103 ntBASIC2.35□□□□□ -2.03
DDR1Q08345 Y_RNA.785-201ENST00000384290 109 ntBASIC2.35□□□□□ -2.03
DDR1Q08345 RNU6-378P-201ENST00000384324 107 ntBASIC2.35□□□□□ -2.03
DDR1Q08345 Y_RNA.478-201ENST00000384358 107 ntBASIC2.35□□□□□ -2.03
DDR1Q08345 Y_RNA.602-201ENST00000410535 92 ntBASIC2.35□□□□□ -2.03
DDR1Q08345 AC245102.2-201ENST00000448956 180 ntBASIC2.35□□□□□ -2.03
DDR1Q08345 RNA5SP445-201ENST00000515889 115 ntBASIC2.35□□□□□ -2.03
DDR1Q08345 RNU6-1338P-201ENST00000516328 91 ntBASIC2.35□□□□□ -2.03
DDR1Q08345 RNU6-182P-201ENST00000516970 105 ntBASIC2.35□□□□□ -2.03
DDR1Q08345 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.35□□□□□ -2.03
DDR1Q08345 MIR3923-201ENST00000579521 83 ntBASIC2.35□□□□□ -2.03
DDR1Q08345 AC004792.1-201ENST00000614523 137 ntBASIC2.35□□□□□ -2.03
DDR1Q08345 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.35□□□□□ -2.03
DDR1Q08345 BX322639.1-202ENST00000423987 2213 ntBASIC2.35□□□□□ -2.03
DDR1Q08345 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
DDR1Q08345 AC009487.4-201ENST00000624969 3585 ntBASIC2.34□□□□□ -2.03
DDR1Q08345 RNU6-1266P-201ENST00000362794 105 ntBASIC2.34□□□□□ -2.03
DDR1Q08345 SNORA3A-201ENST00000364113 130 ntBASIC2.34□□□□□ -2.03
DDR1Q08345 RNU6-281P-201ENST00000384212 103 ntBASIC2.34□□□□□ -2.03
DDR1Q08345 SNORD115-46-201ENST00000390982 71 ntBASIC2.34□□□□□ -2.03
DDR1Q08345 SNORD23.1-201ENST00000408212 104 ntBASIC2.34□□□□□ -2.03
DDR1Q08345 RNA5SP338-201ENST00000410495 85 ntBASIC2.34□□□□□ -2.03
DDR1Q08345 EDDM3CP-201ENST00000415977 425 ntBASIC2.34□□□□□ -2.03
DDR1Q08345 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.34□□□□□ -2.03
DDR1Q08345 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.34□□□□□ -2.03
DDR1Q08345 TRMT112P2-201ENST00000512910 132 ntBASIC2.34□□□□□ -2.03
DDR1Q08345 RNU6-1198P-201ENST00000516904 67 ntBASIC2.34□□□□□ -2.03
DDR1Q08345 RNA5SP54-201ENST00000516951 92 ntBASIC2.34□□□□□ -2.03
DDR1Q08345 RNU6-255P-201ENST00000516957 105 ntBASIC2.34□□□□□ -2.03
DDR1Q08345 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.34□□□□□ -2.03
DDR1Q08345 MIR4529-201ENST00000578110 78 ntBASIC2.34□□□□□ -2.03
DDR1Q08345 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.34□□□□□ -2.03
DDR1Q08345 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.33□□□□□ -2.04
DDR1Q08345 MIR337-201ENST00000362281 93 ntBASIC2.33□□□□□ -2.04
DDR1Q08345 Y_RNA.29-201ENST00000362570 113 ntBASIC2.33□□□□□ -2.04
DDR1Q08345 Y_RNA.180-201ENST00000363867 113 ntBASIC2.33□□□□□ -2.04
DDR1Q08345 Y_RNA.270-201ENST00000364693 104 ntBASIC2.33□□□□□ -2.04
DDR1Q08345 RNA5SP138-201ENST00000365098 114 ntBASIC2.33□□□□□ -2.04
DDR1Q08345 RNU6-886P-201ENST00000384319 105 ntBASIC2.33□□□□□ -2.04
DDR1Q08345 RNU6-937P-201ENST00000384325 106 ntBASIC2.33□□□□□ -2.04
DDR1Q08345 MIR1294-201ENST00000408503 142 ntBASIC2.33□□□□□ -2.04
DDR1Q08345 RNU6-717P-201ENST00000459076 104 ntBASIC2.33□□□□□ -2.04
DDR1Q08345 RPL36AP21-201ENST00000490372 323 ntBASIC2.33□□□□□ -2.04
DDR1Q08345 RNU6-1012P-201ENST00000516606 109 ntBASIC2.33□□□□□ -2.04
DDR1Q08345 MIR514B-201ENST00000516774 80 ntBASIC2.33□□□□□ -2.04
DDR1Q08345 AC091144.1-201ENST00000519573 138 ntBASIC2.33□□□□□ -2.04
DDR1Q08345 NDUFA5P6-201ENST00000542110 379 ntBASIC2.33□□□□□ -2.04
DDR1Q08345 AC093023.1-201ENST00000547375 507 ntBASIC2.33□□□□□ -2.04
DDR1Q08345 UBL5P4-201ENST00000562584 236 ntBASIC2.33□□□□□ -2.04
DDR1Q08345 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.33□□□□□ -2.04
DDR1Q08345 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
DDR1Q08345 MIR335-201ENST00000362173 94 ntBASIC2.32□□□□□ -2.04
DDR1Q08345 RNY1P10-201ENST00000363268 113 ntBASIC2.32□□□□□ -2.04
DDR1Q08345 RNY1-201ENST00000364228 113 ntBASIC2.32□□□□□ -2.04
DDR1Q08345 SNORD32B-201ENST00000364460 84 ntBASIC2.32□□□□□ -2.04
DDR1Q08345 RNU4-56P-201ENST00000364700 142 ntBASIC2.32□□□□□ -2.04
DDR1Q08345 RNA5SP160-201ENST00000364866 120 ntBASIC2.32□□□□□ -2.04
DDR1Q08345 Y_RNA.352-201ENST00000365439 102 ntBASIC2.32□□□□□ -2.04
DDR1Q08345 RNU6-546P-201ENST00000383991 107 ntBASIC2.32□□□□□ -2.04
DDR1Q08345 RNU6-926P-201ENST00000384075 107 ntBASIC2.32□□□□□ -2.04
DDR1Q08345 RNU6-1145P-201ENST00000384246 107 ntBASIC2.32□□□□□ -2.04
DDR1Q08345 MIR329-1-201ENST00000385028 80 ntBASIC2.32□□□□□ -2.04
DDR1Q08345 SNORA46.1-201ENST00000391069 153 ntBASIC2.32□□□□□ -2.04
DDR1Q08345 MRPL35P1-201ENST00000404272 572 ntBASIC2.32□□□□□ -2.04
DDR1Q08345 U3.40-201ENST00000408706 208 ntBASIC2.32□□□□□ -2.04
DDR1Q08345 MIR1298-201ENST00000408783 112 ntBASIC2.32□□□□□ -2.04
DDR1Q08345 RNU2-40P-201ENST00000410833 196 ntBASIC2.32□□□□□ -2.04
DDR1Q08345 AC096920.1-201ENST00000423991 241 ntBASIC2.32□□□□□ -2.04
DDR1Q08345 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.32□□□□□ -2.04
DDR1Q08345 AC145146.1-201ENST00000496370 254 ntBASIC2.32□□□□□ -2.04
DDR1Q08345 AC018630.3-201ENST00000542637 96 ntBASIC2.32□□□□□ -2.04
DDR1Q08345 EIF4A1P12-201ENST00000551910 141 ntBASIC2.32□□□□□ -2.04
DDR1Q08345 MIR3133-201ENST00000583157 78 ntBASIC2.32□□□□□ -2.04
DDR1Q08345 uc_338.20-201ENST00000621563 178 ntBASIC2.32□□□□□ -2.04
DDR1Q08345 AC012640.5-201ENST00000623897 319 ntBASIC2.32□□□□□ -2.04
DDR1Q08345 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
DDR1Q08345 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
DDR1Q08345 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.31□□□□□ -2.04
DDR1Q08345 Y_RNA.76-201ENST00000362931 109 ntBASIC2.31□□□□□ -2.04
DDR1Q08345 Y_RNA.796-201ENST00000364268 102 ntBASIC2.31□□□□□ -2.04
DDR1Q08345 Y_RNA.799-201ENST00000364992 102 ntBASIC2.31□□□□□ -2.04
DDR1Q08345 Y_RNA.439-201ENST00000384119 94 ntBASIC2.31□□□□□ -2.04
DDR1Q08345 MIR208B-201ENST00000401172 77 ntBASIC2.31□□□□□ -2.04
DDR1Q08345 AC074198.2-201ENST00000508153 258 ntBASIC2.31□□□□□ -2.04
DDR1Q08345 AC107393.1-201ENST00000512403 346 ntBASIC2.31□□□□□ -2.04
DDR1Q08345 RN7SKP49-201ENST00000516675 260 ntBASIC2.31□□□□□ -2.04
DDR1Q08345 DEFB131C-201ENST00000528817 165 ntBASIC2.31□□□□□ -2.04
DDR1Q08345 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.31□□□□□ -2.04
DDR1Q08345 MIR3910-1-201ENST00000580936 111 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms