Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 RNU2-20P-201ENST00000410425 191 ntBASIC1.86□□□□□ -2.11
CLDN20P56880 AL139156.1-201ENST00000412785 841 ntBASIC1.86□□□□□ -2.11
CLDN20P56880 RPL23AP36-201ENST00000413895 458 ntBASIC1.86□□□□□ -2.11
CLDN20P56880 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
CLDN20P56880 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.86□□□□□ -2.11
CLDN20P56880 AC005042.3-201ENST00000453230 174 ntBASIC1.86□□□□□ -2.11
CLDN20P56880 MTND5P22-201ENST00000458380 195 ntBASIC1.86□□□□□ -2.11
CLDN20P56880 RN7SL274P-201ENST00000492268 272 ntBASIC1.86□□□□□ -2.11
CLDN20P56880 RNU6-1143P-201ENST00000516125 104 ntBASIC1.86□□□□□ -2.11
CLDN20P56880 RNU6-327P-201ENST00000516270 127 ntBASIC1.86□□□□□ -2.11
CLDN20P56880 RNU6-155P-201ENST00000516347 100 ntBASIC1.86□□□□□ -2.11
CLDN20P56880 RNU7-110P-201ENST00000516891 62 ntBASIC1.86□□□□□ -2.11
CLDN20P56880 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.86□□□□□ -2.11
CLDN20P56880 IGKV3-31-201ENST00000523109 329 ntBASIC1.86□□□□□ -2.11
CLDN20P56880 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.86□□□□□ -2.11
CLDN20P56880 AC136932.1-201ENST00000574771 208 ntBASIC1.86□□□□□ -2.11
CLDN20P56880 MIR4300-201ENST00000581016 96 ntBASIC1.86□□□□□ -2.11
CLDN20P56880 AC011373.1-201ENST00000607270 237 ntBASIC1.86□□□□□ -2.11
CLDN20P56880 Y_RNA.783-201ENST00000613546 102 ntBASIC1.86□□□□□ -2.11
CLDN20P56880 U1.36-201ENST00000620684 176 ntBASIC1.86□□□□□ -2.11
CLDN20P56880 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.86□□□□□ -2.11
CLDN20P56880 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CLDN20P56880 SNORD114-7-201ENST00000362520 77 ntBASIC1.85□□□□□ -2.11
CLDN20P56880 RNU6-862P-201ENST00000362804 105 ntBASIC1.85□□□□□ -2.11
CLDN20P56880 RNU6-770P-201ENST00000363929 105 ntBASIC1.85□□□□□ -2.11
CLDN20P56880 SNORD115-30-201ENST00000364117 82 ntBASIC1.85□□□□□ -2.11
CLDN20P56880 SNORA16B-201ENST00000364674 135 ntBASIC1.85□□□□□ -2.11
CLDN20P56880 SNORA20B-201ENST00000384220 132 ntBASIC1.85□□□□□ -2.11
CLDN20P56880 RNU6-21P-201ENST00000384710 107 ntBASIC1.85□□□□□ -2.11
CLDN20P56880 MIR515-2-201ENST00000384883 83 ntBASIC1.85□□□□□ -2.11
CLDN20P56880 MIR515-1-201ENST00000384884 83 ntBASIC1.85□□□□□ -2.11
CLDN20P56880 SNORA48.1-201ENST00000390879 135 ntBASIC1.85□□□□□ -2.11
CLDN20P56880 SNORD115-46-201ENST00000390982 71 ntBASIC1.85□□□□□ -2.11
CLDN20P56880 AL355796.1-201ENST00000406706 323 ntBASIC1.85□□□□□ -2.11
CLDN20P56880 RNU6-1199P-201ENST00000411249 104 ntBASIC1.85□□□□□ -2.11
CLDN20P56880 ELOCP20-201ENST00000422460 345 ntBASIC1.85□□□□□ -2.11
CLDN20P56880 MTND2P23-201ENST00000422990 651 ntBASIC1.85□□□□□ -2.11
CLDN20P56880 CST2P1-201ENST00000425770 87 ntBASIC1.85□□□□□ -2.11
CLDN20P56880 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.85□□□□□ -2.11
CLDN20P56880 AL118496.2-201ENST00000448300 230 ntBASIC1.85□□□□□ -2.11
CLDN20P56880 AC025465.3-201ENST00000510570 311 ntBASIC1.85□□□□□ -2.11
CLDN20P56880 RNY3P15-201ENST00000516297 97 ntBASIC1.85□□□□□ -2.11
CLDN20P56880 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.85□□□□□ -2.11
CLDN20P56880 AL137100.2-201ENST00000555786 315 ntBASIC1.85□□□□□ -2.11
CLDN20P56880 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.85□□□□□ -2.11
CLDN20P56880 AC136443.5-201ENST00000603741 370 ntBASIC1.85□□□□□ -2.11
CLDN20P56880 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.85□□□□□ -2.11
CLDN20P56880 RNU6-271P-201ENST00000363858 105 ntBASIC1.84□□□□□ -2.11
CLDN20P56880 Y_RNA.331-201ENST00000365267 102 ntBASIC1.84□□□□□ -2.11
CLDN20P56880 Y_RNA.361-201ENST00000365515 120 ntBASIC1.84□□□□□ -2.11
CLDN20P56880 RNU6-417P-201ENST00000384712 107 ntBASIC1.84□□□□□ -2.11
CLDN20P56880 RNU2-2P-201ENST00000410396 191 ntBASIC1.84□□□□□ -2.11
CLDN20P56880 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.84□□□□□ -2.11
CLDN20P56880 AL445646.1-201ENST00000431784 216 ntBASIC1.84□□□□□ -2.11
CLDN20P56880 AC099677.2-201ENST00000436385 175 ntBASIC1.84□□□□□ -2.11
CLDN20P56880 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.84□□□□□ -2.11
CLDN20P56880 SEPT14P8-201ENST00000508026 178 ntBASIC1.84□□□□□ -2.11
CLDN20P56880 RNU6-1045P-201ENST00000516321 107 ntBASIC1.84□□□□□ -2.11
CLDN20P56880 PRR13P7-201ENST00000605538 430 ntBASIC1.84□□□□□ -2.11
CLDN20P56880 SNORD113-5-201ENST00000607261 78 ntBASIC1.84□□□□□ -2.11
CLDN20P56880 SDR42E1P4-201ENST00000620894 481 ntBASIC1.84□□□□□ -2.11
CLDN20P56880 CENPCP1-201ENST00000533085 2578 ntBASIC1.84□□□□□ -2.12
CLDN20P56880 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.84□□□□□ -2.12
CLDN20P56880 AL359851.1-201ENST00000569460 4997 ntBASIC1.83□□□□□ -2.12
CLDN20P56880 Y_RNA.19-201ENST00000362462 99 ntBASIC1.83□□□□□ -2.12
CLDN20P56880 SNORA27.1-201ENST00000362604 124 ntBASIC1.83□□□□□ -2.12
CLDN20P56880 RNU1-96P-201ENST00000364163 162 ntBASIC1.83□□□□□ -2.12
CLDN20P56880 Y_RNA.459-201ENST00000384251 102 ntBASIC1.83□□□□□ -2.12
CLDN20P56880 MIR17-201ENST00000385012 84 ntBASIC1.83□□□□□ -2.12
CLDN20P56880 RNU6-1109P-201ENST00000391187 107 ntBASIC1.83□□□□□ -2.12
CLDN20P56880 MIR873-201ENST00000401120 77 ntBASIC1.83□□□□□ -2.12
CLDN20P56880 RNU6-121P-201ENST00000410525 99 ntBASIC1.83□□□□□ -2.12
CLDN20P56880 RNA5SP501-201ENST00000410990 112 ntBASIC1.83□□□□□ -2.12
CLDN20P56880 AL121890.1-201ENST00000435457 205 ntBASIC1.83□□□□□ -2.12
CLDN20P56880 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CLDN20P56880 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.83□□□□□ -2.12
CLDN20P56880 AL731563.1-201ENST00000442202 214 ntBASIC1.83□□□□□ -2.12
CLDN20P56880 LINC01399-202ENST00000458450 244 ntBASIC1.83□□□□□ -2.12
CLDN20P56880 RNU6-966P-201ENST00000516479 104 ntBASIC1.83□□□□□ -2.12
CLDN20P56880 MIR514B-201ENST00000516774 80 ntBASIC1.83□□□□□ -2.12
CLDN20P56880 AC069114.2-201ENST00000604699 304 ntBASIC1.83□□□□□ -2.12
CLDN20P56880 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
CLDN20P56880 SNORD114-1-201ENST00000362705 72 ntBASIC1.82□□□□□ -2.12
CLDN20P56880 Y_RNA.105-201ENST00000363182 111 ntBASIC1.82□□□□□ -2.12
CLDN20P56880 SNORD113-8-201ENST00000363497 74 ntBASIC1.82□□□□□ -2.12
CLDN20P56880 AL031003.1-201ENST00000404229 172 ntBASIC1.82□□□□□ -2.12
CLDN20P56880 MIR548F4-201ENST00000408515 105 ntBASIC1.82□□□□□ -2.12
CLDN20P56880 RNU4-30P-201ENST00000410245 143 ntBASIC1.82□□□□□ -2.12
CLDN20P56880 AL356379.1-201ENST00000414105 126 ntBASIC1.82□□□□□ -2.12
CLDN20P56880 AC096920.1-201ENST00000423991 241 ntBASIC1.82□□□□□ -2.12
CLDN20P56880 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.82□□□□□ -2.12
CLDN20P56880 MRPS10P1-201ENST00000448483 130 ntBASIC1.82□□□□□ -2.12
CLDN20P56880 MTATP8P1-201ENST00000467115 207 ntBASIC1.82□□□□□ -2.12
CLDN20P56880 RPS27P22-201ENST00000478056 241 ntBASIC1.82□□□□□ -2.12
CLDN20P56880 SNORA70.12-201ENST00000516084 153 ntBASIC1.82□□□□□ -2.12
CLDN20P56880 RNVU1-2-201ENST00000516326 135 ntBASIC1.82□□□□□ -2.12
CLDN20P56880 AC027419.1-201ENST00000522976 328 ntBASIC1.82□□□□□ -2.12
CLDN20P56880 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.82□□□□□ -2.12
CLDN20P56880 AL117187.1-201ENST00000555482 181 ntBASIC1.82□□□□□ -2.12
CLDN20P56880 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 162.7 ms