Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 RNU6-958P-201ENST00000516995 106 ntBASIC4.5□□□□□ -1.69
NUBP1P53384 RNU6-1116P-201ENST00000517269 99 ntBASIC4.5□□□□□ -1.69
NUBP1P53384 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.5□□□□□ -1.69
NUBP1P53384 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
NUBP1P53384 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.5□□□□□ -1.69
NUBP1P53384 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NUBP1P53384 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NUBP1P53384 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.5□□□□□ -1.69
NUBP1P53384 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
NUBP1P53384 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.5□□□□□ -1.69
NUBP1P53384 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.5□□□□□ -1.69
NUBP1P53384 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.5□□□□□ -1.69
NUBP1P53384 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.49□□□□□ -1.69
NUBP1P53384 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
NUBP1P53384 UBL5P1-201ENST00000507979 193 ntBASIC4.49□□□□□ -1.69
NUBP1P53384 AC023141.11-201ENST00000508864 202 ntBASIC4.49□□□□□ -1.69
NUBP1P53384 SNORA70.24-201ENST00000517233 118 ntBASIC4.49□□□□□ -1.69
NUBP1P53384 MIR5685-201ENST00000579080 79 ntBASIC4.49□□□□□ -1.69
NUBP1P53384 AC005336.3-201ENST00000623833 2679 ntBASIC4.49□□□□□ -1.69
NUBP1P53384 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
NUBP1P53384 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.49□□□□□ -1.69
NUBP1P53384 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.49□□□□□ -1.69
NUBP1P53384 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
NUBP1P53384 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
NUBP1P53384 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
NUBP1P53384 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NUBP1P53384 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
NUBP1P53384 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
NUBP1P53384 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
NUBP1P53384 RNU6-590P-201ENST00000365039 107 ntBASIC4.48□□□□□ -1.69
NUBP1P53384 Y_RNA.567-201ENST00000384736 106 ntBASIC4.48□□□□□ -1.69
NUBP1P53384 SNORA11.4-201ENST00000408823 129 ntBASIC4.48□□□□□ -1.69
NUBP1P53384 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC4.48□□□□□ -1.69
NUBP1P53384 AC079587.1-201ENST00000603846 277 ntBASIC4.48□□□□□ -1.69
NUBP1P53384 AC005000.2-201ENST00000605468 310 ntBASIC4.48□□□□□ -1.69
NUBP1P53384 MIR6717-201ENST00000622747 73 ntBASIC4.48□□□□□ -1.69
NUBP1P53384 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NUBP1P53384 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
NUBP1P53384 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.48□□□□□ -1.69
NUBP1P53384 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
NUBP1P53384 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.47□□□□□ -1.69
NUBP1P53384 AL136164.3-201ENST00000624429 3978 ntBASIC4.47□□□□□ -1.69
NUBP1P53384 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
NUBP1P53384 RPS29P7-201ENST00000439662 171 ntBASIC4.47□□□□□ -1.69
NUBP1P53384 RPS29P29-201ENST00000456396 171 ntBASIC4.47□□□□□ -1.69
NUBP1P53384 RN7SL691P-201ENST00000494487 301 ntBASIC4.47□□□□□ -1.69
NUBP1P53384 VWA8P1-201ENST00000510889 176 ntBASIC4.47□□□□□ -1.69
NUBP1P53384 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
NUBP1P53384 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
NUBP1P53384 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NUBP1P53384 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NUBP1P53384 CPHL1P-201ENST00000461341 3407 ntBASIC4.47□□□□□ -1.69
NUBP1P53384 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
NUBP1P53384 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
NUBP1P53384 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
NUBP1P53384 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.46□□□□□ -1.69
NUBP1P53384 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NUBP1P53384 MIR331-201ENST00000362302 94 ntBASIC4.46□□□□□ -1.7
NUBP1P53384 RNU6-1244P-201ENST00000363614 108 ntBASIC4.46□□□□□ -1.7
NUBP1P53384 SNORD115-27-201ENST00000364430 82 ntBASIC4.46□□□□□ -1.7
NUBP1P53384 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
NUBP1P53384 RPL31P63-201ENST00000422565 375 ntBASIC4.46□□□□□ -1.7
NUBP1P53384 AL606517.2-201ENST00000442855 241 ntBASIC4.46□□□□□ -1.7
NUBP1P53384 AC099522.1-202ENST00000514718 367 ntBASIC4.46□□□□□ -1.7
NUBP1P53384 MIR4474-201ENST00000579189 78 ntBASIC4.46□□□□□ -1.7
NUBP1P53384 RNU6-90P-201ENST00000606352 106 ntBASIC4.46□□□□□ -1.7
NUBP1P53384 MIR8054-201ENST00000620877 86 ntBASIC4.46□□□□□ -1.7
NUBP1P53384 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.46□□□□□ -1.7
NUBP1P53384 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.46□□□□□ -1.7
NUBP1P53384 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
NUBP1P53384 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.46□□□□□ -1.7
NUBP1P53384 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NUBP1P53384 NEAT1-202ENST00000501122 22743 ntBASIC4.46□□□□□ -1.7
NUBP1P53384 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NUBP1P53384 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
NUBP1P53384 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
NUBP1P53384 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.45□□□□□ -1.7
NUBP1P53384 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
NUBP1P53384 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
NUBP1P53384 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.45□□□□□ -1.7
NUBP1P53384 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NUBP1P53384 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
NUBP1P53384 MIRLET7C-201ENST00000362160 84 ntBASIC4.45□□□□□ -1.7
NUBP1P53384 RNU6-315P-201ENST00000362666 107 ntBASIC4.45□□□□□ -1.7
NUBP1P53384 RNA5SP109-201ENST00000391010 116 ntBASIC4.45□□□□□ -1.7
NUBP1P53384 SNORA26.6-201ENST00000391256 115 ntBASIC4.45□□□□□ -1.7
NUBP1P53384 RN7SL290P-201ENST00000578661 300 ntBASIC4.45□□□□□ -1.7
NUBP1P53384 AC012314.7-201ENST00000619693 93 ntBASIC4.45□□□□□ -1.7
NUBP1P53384 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
NUBP1P53384 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NUBP1P53384 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
NUBP1P53384 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NUBP1P53384 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NUBP1P53384 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
NUBP1P53384 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NUBP1P53384 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.44□□□□□ -1.7
NUBP1P53384 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NUBP1P53384 RNU1-83P-201ENST00000363426 164 ntBASIC4.44□□□□□ -1.7
NUBP1P53384 RNA5SP130-201ENST00000364431 114 ntBASIC4.44□□□□□ -1.7
NUBP1P53384 RNU6-1072P-201ENST00000384703 107 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms