Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 AC003982.1-202ENST00000469928 248 ntBASIC2.62□□□□□ -1.99
CLK3P49761 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.62□□□□□ -1.99
CLK3P49761 RNU6-1333P-201ENST00000516162 93 ntBASIC2.62□□□□□ -1.99
CLK3P49761 RNU6-971P-201ENST00000516920 106 ntBASIC2.62□□□□□ -1.99
CLK3P49761 RNU1-117P-201ENST00000517041 158 ntBASIC2.62□□□□□ -1.99
CLK3P49761 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.62□□□□□ -1.99
CLK3P49761 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.62□□□□□ -1.99
CLK3P49761 AL356280.1-201ENST00000603614 379 ntBASIC2.62□□□□□ -1.99
CLK3P49761 AL391903.3-201ENST00000612158 163 ntBASIC2.62□□□□□ -1.99
CLK3P49761 AC008873.1-201ENST00000625051 138 ntBASIC2.62□□□□□ -1.99
CLK3P49761 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.62□□□□□ -1.99
CLK3P49761 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CLK3P49761 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
CLK3P49761 MIR26A1-201ENST00000362205 77 ntBASIC2.61□□□□□ -1.99
CLK3P49761 Y_RNA.71-201ENST00000362892 104 ntBASIC2.61□□□□□ -1.99
CLK3P49761 RNU6-199P-201ENST00000362954 107 ntBASIC2.61□□□□□ -1.99
CLK3P49761 U3.8-201ENST00000363675 217 ntBASIC2.61□□□□□ -1.99
CLK3P49761 Y_RNA.172-201ENST00000363765 102 ntBASIC2.61□□□□□ -1.99
CLK3P49761 RNU6-1048P-201ENST00000364054 107 ntBASIC2.61□□□□□ -1.99
CLK3P49761 Y_RNA.310-201ENST00000365063 113 ntBASIC2.61□□□□□ -1.99
CLK3P49761 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
CLK3P49761 SNORA18.2-201ENST00000383865 132 ntBASIC2.61□□□□□ -1.99
CLK3P49761 RNU1-138P-201ENST00000384093 164 ntBASIC2.61□□□□□ -1.99
CLK3P49761 SNORA67.2-201ENST00000384300 149 ntBASIC2.61□□□□□ -1.99
CLK3P49761 MIR128-1-201ENST00000384921 82 ntBASIC2.61□□□□□ -1.99
CLK3P49761 RNU6-855P-201ENST00000410395 104 ntBASIC2.61□□□□□ -1.99
CLK3P49761 AC092427.1-202ENST00000430569 476 ntBASIC2.61□□□□□ -1.99
CLK3P49761 SCARNA8-201ENST00000515924 131 ntBASIC2.61□□□□□ -1.99
CLK3P49761 SNORA9.3-201ENST00000516383 129 ntBASIC2.61□□□□□ -1.99
CLK3P49761 RNU2-44P-201ENST00000516795 194 ntBASIC2.61□□□□□ -1.99
CLK3P49761 RPL30P11-203ENST00000598995 310 ntBASIC2.61□□□□□ -1.99
CLK3P49761 AL049779.4-201ENST00000604500 156 ntBASIC2.61□□□□□ -1.99
CLK3P49761 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.61□□□□□ -1.99
CLK3P49761 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CLK3P49761 MIR3658-201ENST00000636291 56 ntBASIC2.61□□□□□ -1.99
CLK3P49761 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.61□□□□□ -1.99
CLK3P49761 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CLK3P49761 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CLK3P49761 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.6□□□□□ -1.99
CLK3P49761 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
CLK3P49761 SNORA44-201ENST00000384584 132 ntBASIC2.6□□□□□ -1.99
CLK3P49761 Y_RNA.572-201ENST00000384757 98 ntBASIC2.6□□□□□ -1.99
CLK3P49761 SNORA48.2-201ENST00000390926 124 ntBASIC2.6□□□□□ -1.99
CLK3P49761 AL445687.1-201ENST00000439946 251 ntBASIC2.6□□□□□ -1.99
CLK3P49761 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.6□□□□□ -1.99
CLK3P49761 AC145146.1-201ENST00000496370 254 ntBASIC2.6□□□□□ -1.99
CLK3P49761 SNORA70.12-201ENST00000516084 153 ntBASIC2.6□□□□□ -1.99
CLK3P49761 RNU6-1007P-201ENST00000516586 107 ntBASIC2.6□□□□□ -1.99
CLK3P49761 RNU6-919P-201ENST00000516731 104 ntBASIC2.6□□□□□ -1.99
CLK3P49761 RNU6-453P-201ENST00000516819 85 ntBASIC2.6□□□□□ -1.99
CLK3P49761 AC005000.2-201ENST00000605468 310 ntBASIC2.6□□□□□ -1.99
CLK3P49761 TUG1_4.1-201ENST00000619464 181 ntBASIC2.6□□□□□ -1.99
CLK3P49761 U6.115-201ENST00000636045 103 ntBASIC2.6□□□□□ -1.99
CLK3P49761 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CLK3P49761 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CLK3P49761 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.59□□□□□ -1.99
CLK3P49761 RNU6-1205P-201ENST00000363625 106 ntBASIC2.59□□□□□ -1.99
CLK3P49761 RNU6-969P-201ENST00000383900 105 ntBASIC2.59□□□□□ -1.99
CLK3P49761 RNU6-144P-201ENST00000383951 107 ntBASIC2.59□□□□□ -1.99
CLK3P49761 Y_RNA.420-201ENST00000384043 110 ntBASIC2.59□□□□□ -1.99
CLK3P49761 SNORA20-201ENST00000384662 132 ntBASIC2.59□□□□□ -1.99
CLK3P49761 RNU6-220P-201ENST00000390919 107 ntBASIC2.59□□□□□ -1.99
CLK3P49761 AL035461.1-201ENST00000421490 332 ntBASIC2.59□□□□□ -1.99
CLK3P49761 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.59□□□□□ -1.99
CLK3P49761 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.59□□□□□ -1.99
CLK3P49761 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.59□□□□□ -1.99
CLK3P49761 RNU6-1211P-201ENST00000459179 105 ntBASIC2.59□□□□□ -1.99
CLK3P49761 RNU7-141P-201ENST00000459304 62 ntBASIC2.59□□□□□ -1.99
CLK3P49761 SRIP1-201ENST00000489235 288 ntBASIC2.59□□□□□ -1.99
CLK3P49761 AC112693.2-201ENST00000556538 232 ntBASIC2.59□□□□□ -1.99
CLK3P49761 MIR3605-201ENST00000583214 100 ntBASIC2.59□□□□□ -1.99
CLK3P49761 ZNF861P-201ENST00000588126 639 ntBASIC2.59□□□□□ -1.99
CLK3P49761 AL670379.2-201ENST00000604983 252 ntBASIC2.59□□□□□ -1.99
CLK3P49761 AL137790.1-201ENST00000634283 177 ntBASIC2.59□□□□□ -1.99
CLK3P49761 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
CLK3P49761 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CLK3P49761 ZNF271P-202ENST00000465539 1970 ntBASIC2.58□□□□□ -2
CLK3P49761 AC069528.2-201ENST00000624849 1991 ntBASIC2.58□□□□□ -2
CLK3P49761 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CLK3P49761 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
CLK3P49761 RNU6-643P-201ENST00000384018 107 ntBASIC2.58□□□□□ -2
CLK3P49761 RNU6-80P-201ENST00000384195 107 ntBASIC2.58□□□□□ -2
CLK3P49761 RNU6-1228P-201ENST00000391014 107 ntBASIC2.58□□□□□ -2
CLK3P49761 AC006461.1-201ENST00000412637 326 ntBASIC2.58□□□□□ -2
CLK3P49761 AC087499.2-201ENST00000432861 149 ntBASIC2.58□□□□□ -2
CLK3P49761 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
CLK3P49761 AL121914.1-201ENST00000450188 156 ntBASIC2.58□□□□□ -2
CLK3P49761 EEF1B2P7-201ENST00000451177 676 ntBASIC2.58□□□□□ -2
CLK3P49761 AC245047.8-201ENST00000456455 284 ntBASIC2.58□□□□□ -2
CLK3P49761 RNU7-197P-201ENST00000458836 62 ntBASIC2.58□□□□□ -2
CLK3P49761 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.58□□□□□ -2
CLK3P49761 RNA5SP367-201ENST00000516557 118 ntBASIC2.58□□□□□ -2
CLK3P49761 MIR3646-201ENST00000578301 84 ntBASIC2.58□□□□□ -2
CLK3P49761 LARP7P3-201ENST00000579888 337 ntBASIC2.58□□□□□ -2
CLK3P49761 MIR3200-201ENST00000580767 85 ntBASIC2.58□□□□□ -2
CLK3P49761 RPL17P51-201ENST00000605218 238 ntBASIC2.58□□□□□ -2
CLK3P49761 AL365361.1-201ENST00000566942 3481 ntBASIC2.58□□□□□ -2
CLK3P49761 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.58□□□□□ -2
CLK3P49761 RNU6-834P-201ENST00000362367 110 ntBASIC2.57□□□□□ -2
CLK3P49761 SNORD114-7-201ENST00000362520 77 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms