Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 AC127455.1-201ENST00000565496 145 ntBASIC3.1□□□□□ -1.91
CCNFP41002 AC005000.2-201ENST00000605468 310 ntBASIC3.1□□□□□ -1.91
CCNFP41002 AL391903.3-201ENST00000612158 163 ntBASIC3.1□□□□□ -1.91
CCNFP41002 MIR6733-201ENST00000635723 61 ntBASIC3.1□□□□□ -1.91
CCNFP41002 AC009487.4-201ENST00000624969 3585 ntBASIC3.1□□□□□ -1.91
CCNFP41002 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.1□□□□□ -1.91
CCNFP41002 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CCNFP41002 AL035425.3-201ENST00000564206 4996 ntBASIC3.1□□□□□ -1.91
CCNFP41002 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
CCNFP41002 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
CCNFP41002 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.09□□□□□ -1.91
CCNFP41002 AC073325.2-201ENST00000339545 159 ntBASIC3.09□□□□□ -1.91
CCNFP41002 SNORD50.2-201ENST00000365465 70 ntBASIC3.09□□□□□ -1.91
CCNFP41002 U8.9-201ENST00000365667 134 ntBASIC3.09□□□□□ -1.91
CCNFP41002 RNU6-1323P-201ENST00000384025 107 ntBASIC3.09□□□□□ -1.91
CCNFP41002 SNORA26.7-201ENST00000391288 122 ntBASIC3.09□□□□□ -1.91
CCNFP41002 RN7SL863P-201ENST00000462370 296 ntBASIC3.09□□□□□ -1.91
CCNFP41002 RN7SL499P-201ENST00000481141 276 ntBASIC3.09□□□□□ -1.91
CCNFP41002 RNU6-561P-201ENST00000516222 102 ntBASIC3.09□□□□□ -1.91
CCNFP41002 RNU2-34P-201ENST00000516534 121 ntBASIC3.09□□□□□ -1.91
CCNFP41002 RN7SKP282-201ENST00000516824 299 ntBASIC3.09□□□□□ -1.91
CCNFP41002 MIR4438-201ENST00000585271 93 ntBASIC3.09□□□□□ -1.91
CCNFP41002 AC090115.4-201ENST00000609970 188 ntBASIC3.09□□□□□ -1.91
CCNFP41002 MIR7112-201ENST00000616126 65 ntBASIC3.09□□□□□ -1.91
CCNFP41002 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
CCNFP41002 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
CCNFP41002 SNORA38.1-201ENST00000364172 131 ntBASIC3.08□□□□□ -1.92
CCNFP41002 RNU4-41P-201ENST00000364426 143 ntBASIC3.08□□□□□ -1.92
CCNFP41002 RNU4-11P-201ENST00000365287 132 ntBASIC3.08□□□□□ -1.92
CCNFP41002 SNORA7.4-201ENST00000384249 137 ntBASIC3.08□□□□□ -1.92
CCNFP41002 MIR548I2-201ENST00000408348 149 ntBASIC3.08□□□□□ -1.92
CCNFP41002 Y_RNA.622-201ENST00000411091 108 ntBASIC3.08□□□□□ -1.92
CCNFP41002 AC123900.1-201ENST00000420390 96 ntBASIC3.08□□□□□ -1.92
CCNFP41002 AC010154.1-201ENST00000425857 269 ntBASIC3.08□□□□□ -1.92
CCNFP41002 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.08□□□□□ -1.92
CCNFP41002 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.08□□□□□ -1.92
CCNFP41002 RNU6-437P-201ENST00000459408 95 ntBASIC3.08□□□□□ -1.92
CCNFP41002 AC093259.1-201ENST00000509755 300 ntBASIC3.08□□□□□ -1.92
CCNFP41002 RNU6-426P-201ENST00000516464 97 ntBASIC3.08□□□□□ -1.92
CCNFP41002 MIR5688-201ENST00000580619 83 ntBASIC3.08□□□□□ -1.92
CCNFP41002 MIR4513-201ENST00000581077 86 ntBASIC3.08□□□□□ -1.92
CCNFP41002 AL031274.2-201ENST00000599419 203 ntBASIC3.08□□□□□ -1.92
CCNFP41002 AC006435.5-201ENST00000624486 112 ntBASIC3.08□□□□□ -1.92
CCNFP41002 SCARNA15.3-201ENST00000626315 122 ntBASIC3.08□□□□□ -1.92
CCNFP41002 SCARNA4.1-201ENST00000628597 123 ntBASIC3.08□□□□□ -1.92
CCNFP41002 MIR622-201ENST00000638396 96 ntBASIC3.08□□□□□ -1.92
CCNFP41002 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.08□□□□□ -1.92
CCNFP41002 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.07□□□□□ -1.92
CCNFP41002 AC245060.5-201ENST00000610778 3293 ntBASIC3.07□□□□□ -1.92
CCNFP41002 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
CCNFP41002 RNU6-199P-201ENST00000362954 107 ntBASIC3.07□□□□□ -1.92
CCNFP41002 RNA5SP125-201ENST00000364843 120 ntBASIC3.07□□□□□ -1.92
CCNFP41002 RNU6-728P-201ENST00000365375 104 ntBASIC3.07□□□□□ -1.92
CCNFP41002 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.07□□□□□ -1.92
CCNFP41002 SNORD15B-201ENST00000384714 146 ntBASIC3.07□□□□□ -1.92
CCNFP41002 RNU6-376P-201ENST00000384731 106 ntBASIC3.07□□□□□ -1.92
CCNFP41002 MIR181B1-201ENST00000385240 110 ntBASIC3.07□□□□□ -1.92
CCNFP41002 RNU6-1228P-201ENST00000391014 107 ntBASIC3.07□□□□□ -1.92
CCNFP41002 SNORD37.2-201ENST00000391075 66 ntBASIC3.07□□□□□ -1.92
CCNFP41002 AL162725.1-201ENST00000435405 301 ntBASIC3.07□□□□□ -1.92
CCNFP41002 HMGN2P34-201ENST00000437647 269 ntBASIC3.07□□□□□ -1.92
CCNFP41002 MTCO1P44-201ENST00000441935 243 ntBASIC3.07□□□□□ -1.92
CCNFP41002 AC025750.2-201ENST00000442609 450 ntBASIC3.07□□□□□ -1.92
CCNFP41002 AL357134.1-201ENST00000445848 426 ntBASIC3.07□□□□□ -1.92
CCNFP41002 RN7SL633P-201ENST00000488974 297 ntBASIC3.07□□□□□ -1.92
CCNFP41002 RPS29P21-201ENST00000496272 170 ntBASIC3.07□□□□□ -1.92
CCNFP41002 SNORA25.12-201ENST00000516202 82 ntBASIC3.07□□□□□ -1.92
CCNFP41002 RNU6-667P-201ENST00000517186 102 ntBASIC3.07□□□□□ -1.92
CCNFP41002 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.07□□□□□ -1.92
CCNFP41002 AC015720.1-201ENST00000565251 277 ntBASIC3.07□□□□□ -1.92
CCNFP41002 MIR5004-201ENST00000579078 107 ntBASIC3.07□□□□□ -1.92
CCNFP41002 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.07□□□□□ -1.92
CCNFP41002 MIR3658-201ENST00000636291 56 ntBASIC3.07□□□□□ -1.92
CCNFP41002 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.07□□□□□ -1.92
CCNFP41002 CENPCP1-201ENST00000533085 2578 ntBASIC3.06□□□□□ -1.92
CCNFP41002 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
CCNFP41002 Y_RNA.337-201ENST00000365312 102 ntBASIC3.06□□□□□ -1.92
CCNFP41002 MIR1278-201ENST00000408753 81 ntBASIC3.06□□□□□ -1.92
CCNFP41002 RNA5SP274-201ENST00000410484 108 ntBASIC3.06□□□□□ -1.92
CCNFP41002 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.06□□□□□ -1.92
CCNFP41002 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.06□□□□□ -1.92
CCNFP41002 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.06□□□□□ -1.92
CCNFP41002 RPL36AP21-201ENST00000490372 323 ntBASIC3.06□□□□□ -1.92
CCNFP41002 RNU7-172P-201ENST00000517125 64 ntBASIC3.06□□□□□ -1.92
CCNFP41002 MIR548AI-201ENST00000579940 88 ntBASIC3.06□□□□□ -1.92
CCNFP41002 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.06□□□□□ -1.92
CCNFP41002 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.06□□□□□ -1.92
CCNFP41002 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CCNFP41002 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.06□□□□□ -1.92
CCNFP41002 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CCNFP41002 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CCNFP41002 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CCNFP41002 Y_RNA.291-201ENST00000364886 113 ntBASIC3.05□□□□□ -1.92
CCNFP41002 Y_RNA.587-201ENST00000391210 103 ntBASIC3.05□□□□□ -1.92
CCNFP41002 MIR513C-201ENST00000401352 84 ntBASIC3.05□□□□□ -1.92
CCNFP41002 UBBP3-201ENST00000445497 241 ntBASIC3.05□□□□□ -1.92
CCNFP41002 AC104389.3-201ENST00000445629 235 ntBASIC3.05□□□□□ -1.92
CCNFP41002 BX510359.1-201ENST00000456973 237 ntBASIC3.05□□□□□ -1.92
CCNFP41002 RNU6-56P-201ENST00000516986 93 ntBASIC3.05□□□□□ -1.92
CCNFP41002 MIR548X2-201ENST00000579776 100 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms