Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.66□□□□□ -1.82
RXRBP28702 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RXRBP28702 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.65□□□□□ -1.82
RXRBP28702 AL355596.1-201ENST00000565399 3996 ntBASIC3.65□□□□□ -1.83
RXRBP28702 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
RXRBP28702 AL133475.1-201ENST00000404414 305 ntBASIC3.65□□□□□ -1.83
RXRBP28702 RNU6-383P-201ENST00000410864 94 ntBASIC3.65□□□□□ -1.83
RXRBP28702 AL356320.1-201ENST00000429616 163 ntBASIC3.65□□□□□ -1.83
RXRBP28702 AL161651.1-201ENST00000440882 223 ntBASIC3.65□□□□□ -1.83
RXRBP28702 snoU13.14-201ENST00000459372 104 ntBASIC3.65□□□□□ -1.83
RXRBP28702 AC021205.2-201ENST00000480069 347 ntBASIC3.65□□□□□ -1.83
RXRBP28702 RNU1-117P-201ENST00000517041 158 ntBASIC3.65□□□□□ -1.83
RXRBP28702 MIR4679-2-201ENST00000578358 77 ntBASIC3.65□□□□□ -1.83
RXRBP28702 AP000942.3-201ENST00000603702 160 ntBASIC3.65□□□□□ -1.83
RXRBP28702 HSPE1P7-201ENST00000604681 321 ntBASIC3.65□□□□□ -1.83
RXRBP28702 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.65□□□□□ -1.83
RXRBP28702 MIR3914-2-201ENST00000637339 95 ntBASIC3.65□□□□□ -1.83
RXRBP28702 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RXRBP28702 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.65□□□□□ -1.83
RXRBP28702 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
RXRBP28702 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
RXRBP28702 MIR30E-201ENST00000362104 92 ntBASIC3.64□□□□□ -1.83
RXRBP28702 Y_RNA.796-201ENST00000364268 102 ntBASIC3.64□□□□□ -1.83
RXRBP28702 SNORA25.7-201ENST00000364375 127 ntBASIC3.64□□□□□ -1.83
RXRBP28702 Y_RNA.280-201ENST00000364765 112 ntBASIC3.64□□□□□ -1.83
RXRBP28702 U8.7-201ENST00000364940 136 ntBASIC3.64□□□□□ -1.83
RXRBP28702 Y_RNA.799-201ENST00000364992 102 ntBASIC3.64□□□□□ -1.83
RXRBP28702 RNU6-728P-201ENST00000365375 104 ntBASIC3.64□□□□□ -1.83
RXRBP28702 SNORA18.2-201ENST00000383865 132 ntBASIC3.64□□□□□ -1.83
RXRBP28702 RPS27P1-201ENST00000450552 247 ntBASIC3.64□□□□□ -1.83
RXRBP28702 AC093331.1-201ENST00000521474 169 ntBASIC3.64□□□□□ -1.83
RXRBP28702 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.64□□□□□ -1.83
RXRBP28702 MIR4498-201ENST00000577599 66 ntBASIC3.64□□□□□ -1.83
RXRBP28702 MIR5006-201ENST00000583027 110 ntBASIC3.64□□□□□ -1.83
RXRBP28702 AC091152.3-201ENST00000604227 325 ntBASIC3.64□□□□□ -1.83
RXRBP28702 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
RXRBP28702 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
RXRBP28702 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
RXRBP28702 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RXRBP28702 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.63□□□□□ -1.83
RXRBP28702 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
RXRBP28702 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RXRBP28702 U3.9-201ENST00000363823 204 ntBASIC3.63□□□□□ -1.83
RXRBP28702 RNU6-144P-201ENST00000383951 107 ntBASIC3.63□□□□□ -1.83
RXRBP28702 RNU6-147P-201ENST00000383983 107 ntBASIC3.63□□□□□ -1.83
RXRBP28702 MIR548B-201ENST00000385247 97 ntBASIC3.63□□□□□ -1.83
RXRBP28702 SNORA75.5-201ENST00000391291 81 ntBASIC3.63□□□□□ -1.83
RXRBP28702 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.63□□□□□ -1.83
RXRBP28702 RPL30P14-201ENST00000482744 348 ntBASIC3.63□□□□□ -1.83
RXRBP28702 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.63□□□□□ -1.83
RXRBP28702 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.63□□□□□ -1.83
RXRBP28702 MIR4724-201ENST00000579485 89 ntBASIC3.63□□□□□ -1.83
RXRBP28702 AC092435.3-201ENST00000565538 3654 ntBASIC3.63□□□□□ -1.83
RXRBP28702 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RXRBP28702 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
RXRBP28702 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.62□□□□□ -1.83
RXRBP28702 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.62□□□□□ -1.83
RXRBP28702 RNU6-235P-201ENST00000362644 107 ntBASIC3.62□□□□□ -1.83
RXRBP28702 MIR489-201ENST00000384923 84 ntBASIC3.62□□□□□ -1.83
RXRBP28702 AL512604.1-201ENST00000404812 257 ntBASIC3.62□□□□□ -1.83
RXRBP28702 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.62□□□□□ -1.83
RXRBP28702 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.62□□□□□ -1.83
RXRBP28702 AL714022.1-201ENST00000439897 151 ntBASIC3.62□□□□□ -1.83
RXRBP28702 RPS12P18-201ENST00000442381 270 ntBASIC3.62□□□□□ -1.83
RXRBP28702 RNA5SP380-201ENST00000517190 98 ntBASIC3.62□□□□□ -1.83
RXRBP28702 AP000867.2-201ENST00000532468 320 ntBASIC3.62□□□□□ -1.83
RXRBP28702 RPS15AP11-201ENST00000594193 385 ntBASIC3.62□□□□□ -1.83
RXRBP28702 AC120024.3-201ENST00000603167 156 ntBASIC3.62□□□□□ -1.83
RXRBP28702 TP73-AS1.1-201ENST00000611447 161 ntBASIC3.62□□□□□ -1.83
RXRBP28702 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RXRBP28702 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RXRBP28702 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RXRBP28702 RNU6-597P-201ENST00000365620 102 ntBASIC3.61□□□□□ -1.83
RXRBP28702 SNORA22-201ENST00000383907 134 ntBASIC3.61□□□□□ -1.83
RXRBP28702 Y_RNA.521-201ENST00000384560 114 ntBASIC3.61□□□□□ -1.83
RXRBP28702 AC063976.4-201ENST00000421971 163 ntBASIC3.61□□□□□ -1.83
RXRBP28702 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.61□□□□□ -1.83
RXRBP28702 RNU6-772P-201ENST00000516042 105 ntBASIC3.61□□□□□ -1.83
RXRBP28702 RNU2-44P-201ENST00000516795 194 ntBASIC3.61□□□□□ -1.83
RXRBP28702 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.61□□□□□ -1.83
RXRBP28702 MIR3199-2-201ENST00000636243 86 ntBASIC3.61□□□□□ -1.83
RXRBP28702 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RXRBP28702 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RXRBP28702 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.61□□□□□ -1.83
RXRBP28702 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
RXRBP28702 RNU6-1010P-201ENST00000362757 107 ntBASIC3.6□□□□□ -1.83
RXRBP28702 Y_RNA.124-201ENST00000363339 93 ntBASIC3.6□□□□□ -1.83
RXRBP28702 U3.8-201ENST00000363675 217 ntBASIC3.6□□□□□ -1.83
RXRBP28702 RNU6-1336P-201ENST00000383886 109 ntBASIC3.6□□□□□ -1.83
RXRBP28702 AC245291.1-201ENST00000419501 328 ntBASIC3.6□□□□□ -1.83
RXRBP28702 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC3.6□□□□□ -1.83
RXRBP28702 SNRPGP8-201ENST00000454064 226 ntBASIC3.6□□□□□ -1.83
RXRBP28702 RNU7-23P-201ENST00000459465 62 ntBASIC3.6□□□□□ -1.83
RXRBP28702 AC117454.1-201ENST00000491120 168 ntBASIC3.6□□□□□ -1.83
RXRBP28702 RNU7-115P-201ENST00000516433 55 ntBASIC3.6□□□□□ -1.83
RXRBP28702 SNORD19.2-201ENST00000516978 73 ntBASIC3.6□□□□□ -1.83
RXRBP28702 AC068657.1-201ENST00000520807 306 ntBASIC3.6□□□□□ -1.83
RXRBP28702 AC105137.2-201ENST00000569073 466 ntBASIC3.6□□□□□ -1.83
RXRBP28702 MIR1273D-201ENST00000577266 86 ntBASIC3.6□□□□□ -1.83
RXRBP28702 AC073308.1-201ENST00000623696 305 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms