Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 RNU5A-5P-201ENST00000411054 116 ntBASIC1.99□□□□□ -2.09
MMP2P08253 HMGN2P34-201ENST00000437647 269 ntBASIC1.99□□□□□ -2.09
MMP2P08253 AC073910.1-201ENST00000445047 438 ntBASIC1.99□□□□□ -2.09
MMP2P08253 RNU1-40P-201ENST00000516816 164 ntBASIC1.99□□□□□ -2.09
MMP2P08253 RNU1-97P-201ENST00000516872 164 ntBASIC1.99□□□□□ -2.09
MMP2P08253 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.99□□□□□ -2.09
MMP2P08253 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.99□□□□□ -2.09
MMP2P08253 AL162730.1-201ENST00000605734 292 ntBASIC1.99□□□□□ -2.09
MMP2P08253 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.99□□□□□ -2.09
MMP2P08253 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.99□□□□□ -2.09
MMP2P08253 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
MMP2P08253 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
MMP2P08253 AL359851.1-201ENST00000569460 4997 ntBASIC1.98□□□□□ -2.09
MMP2P08253 RNA5SP432-201ENST00000362480 116 ntBASIC1.98□□□□□ -2.09
MMP2P08253 Y_RNA.26-201ENST00000362539 101 ntBASIC1.98□□□□□ -2.09
MMP2P08253 RNA5SP276-201ENST00000362580 94 ntBASIC1.98□□□□□ -2.09
MMP2P08253 Y_RNA.105-201ENST00000363182 111 ntBASIC1.98□□□□□ -2.09
MMP2P08253 Y_RNA.133-201ENST00000363428 110 ntBASIC1.98□□□□□ -2.09
MMP2P08253 Y_RNA.276-201ENST00000364732 109 ntBASIC1.98□□□□□ -2.09
MMP2P08253 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.98□□□□□ -2.09
MMP2P08253 Y_RNA.462-201ENST00000384268 102 ntBASIC1.98□□□□□ -2.09
MMP2P08253 Y_RNA.570-201ENST00000384750 101 ntBASIC1.98□□□□□ -2.09
MMP2P08253 RPL21P1-201ENST00000399532 476 ntBASIC1.98□□□□□ -2.09
MMP2P08253 ELOCP20-201ENST00000422460 345 ntBASIC1.98□□□□□ -2.09
MMP2P08253 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.98□□□□□ -2.09
MMP2P08253 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.98□□□□□ -2.09
MMP2P08253 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.98□□□□□ -2.09
MMP2P08253 SNORD65B-201ENST00000459126 73 ntBASIC1.98□□□□□ -2.09
MMP2P08253 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
MMP2P08253 RNU6-1146P-201ENST00000516282 102 ntBASIC1.98□□□□□ -2.09
MMP2P08253 RNY3P15-201ENST00000516297 97 ntBASIC1.98□□□□□ -2.09
MMP2P08253 RNU2-12P-201ENST00000517216 168 ntBASIC1.98□□□□□ -2.09
MMP2P08253 AC027419.1-201ENST00000522976 328 ntBASIC1.98□□□□□ -2.09
MMP2P08253 AC136932.1-201ENST00000574771 208 ntBASIC1.98□□□□□ -2.09
MMP2P08253 MIR4299-201ENST00000577899 72 ntBASIC1.98□□□□□ -2.09
MMP2P08253 AL773524.1-201ENST00000614065 229 ntBASIC1.98□□□□□ -2.09
MMP2P08253 U6.115-201ENST00000636045 103 ntBASIC1.98□□□□□ -2.09
MMP2P08253 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
MMP2P08253 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
MMP2P08253 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
MMP2P08253 RNU6-862P-201ENST00000362804 105 ntBASIC1.97□□□□□ -2.09
MMP2P08253 snoU2-30.2-201ENST00000362805 70 ntBASIC1.97□□□□□ -2.09
MMP2P08253 Y_RNA.214-201ENST00000364201 112 ntBASIC1.97□□□□□ -2.09
MMP2P08253 RNA5SP138-201ENST00000365098 114 ntBASIC1.97□□□□□ -2.09
MMP2P08253 RNU6-806P-201ENST00000365147 105 ntBASIC1.97□□□□□ -2.09
MMP2P08253 Y_RNA.446-201ENST00000384178 104 ntBASIC1.97□□□□□ -2.09
MMP2P08253 SNORD63-201ENST00000384262 68 ntBASIC1.97□□□□□ -2.09
MMP2P08253 Y_RNA.512-201ENST00000384518 102 ntBASIC1.97□□□□□ -2.09
MMP2P08253 RNU6-417P-201ENST00000384712 107 ntBASIC1.97□□□□□ -2.09
MMP2P08253 RNU2-54P-201ENST00000410299 190 ntBASIC1.97□□□□□ -2.09
MMP2P08253 RNU6-121P-201ENST00000410525 99 ntBASIC1.97□□□□□ -2.09
MMP2P08253 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
MMP2P08253 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.97□□□□□ -2.09
MMP2P08253 snoU13.26-201ENST00000459452 105 ntBASIC1.97□□□□□ -2.09
MMP2P08253 RNU6-155P-201ENST00000516347 100 ntBASIC1.97□□□□□ -2.09
MMP2P08253 RNU6-966P-201ENST00000516479 104 ntBASIC1.97□□□□□ -2.09
MMP2P08253 RNU7-110P-201ENST00000516891 62 ntBASIC1.97□□□□□ -2.09
MMP2P08253 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.97□□□□□ -2.09
MMP2P08253 MIR4423-201ENST00000580922 80 ntBASIC1.97□□□□□ -2.09
MMP2P08253 AC005786.1-201ENST00000588553 154 ntBASIC1.97□□□□□ -2.09
MMP2P08253 AC006380.1-201ENST00000603598 186 ntBASIC1.97□□□□□ -2.09
MMP2P08253 AC022441.3-201ENST00000605737 136 ntBASIC1.97□□□□□ -2.09
MMP2P08253 AC011373.1-201ENST00000607270 237 ntBASIC1.97□□□□□ -2.09
MMP2P08253 MIR376A1-201ENST00000616574 68 ntBASIC1.97□□□□□ -2.09
MMP2P08253 AC022513.1-201ENST00000624512 117 ntBASIC1.97□□□□□ -2.09
MMP2P08253 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.97□□□□□ -2.09
MMP2P08253 RNU6-770P-201ENST00000363929 105 ntBASIC1.96□□□□□ -2.1
MMP2P08253 SNORA8-201ENST00000384574 139 ntBASIC1.96□□□□□ -2.1
MMP2P08253 MIR504-201ENST00000385065 83 ntBASIC1.96□□□□□ -2.1
MMP2P08253 RNA5SP212-201ENST00000391223 107 ntBASIC1.96□□□□□ -2.1
MMP2P08253 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.96□□□□□ -2.1
MMP2P08253 RNU4-30P-201ENST00000410245 143 ntBASIC1.96□□□□□ -2.1
MMP2P08253 AC244636.1-201ENST00000421152 228 ntBASIC1.96□□□□□ -2.1
MMP2P08253 MTND3P2-201ENST00000438452 342 ntBASIC1.96□□□□□ -2.1
MMP2P08253 RPL23AP6-201ENST00000446637 472 ntBASIC1.96□□□□□ -2.1
MMP2P08253 AC010598.1-201ENST00000510378 103 ntBASIC1.96□□□□□ -2.1
MMP2P08253 RNU6-635P-201ENST00000516651 102 ntBASIC1.96□□□□□ -2.1
MMP2P08253 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.96□□□□□ -2.1
MMP2P08253 AC008269.2-201ENST00000561915 1105 ntBASIC1.96□□□□□ -2.1
MMP2P08253 MIR3684-201ENST00000579779 74 ntBASIC1.96□□□□□ -2.1
MMP2P08253 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.96□□□□□ -2.1
MMP2P08253 MIR4300-201ENST00000581016 96 ntBASIC1.96□□□□□ -2.1
MMP2P08253 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.96□□□□□ -2.1
MMP2P08253 MIR338-201ENST00000636369 67 ntBASIC1.96□□□□□ -2.1
MMP2P08253 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.96□□□□□ -2.1
MMP2P08253 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
MMP2P08253 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
MMP2P08253 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.95□□□□□ -2.1
MMP2P08253 Y_RNA.243-201ENST00000364481 109 ntBASIC1.95□□□□□ -2.1
MMP2P08253 Y_RNA.287-201ENST00000364853 94 ntBASIC1.95□□□□□ -2.1
MMP2P08253 Y_RNA.331-201ENST00000365267 102 ntBASIC1.95□□□□□ -2.1
MMP2P08253 SNORA20B-201ENST00000384220 132 ntBASIC1.95□□□□□ -2.1
MMP2P08253 RNU6-21P-201ENST00000384710 107 ntBASIC1.95□□□□□ -2.1
MMP2P08253 Y_RNA.574-201ENST00000384766 95 ntBASIC1.95□□□□□ -2.1
MMP2P08253 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
MMP2P08253 RNU6-1109P-201ENST00000391187 107 ntBASIC1.95□□□□□ -2.1
MMP2P08253 AL117342.1-201ENST00000404861 406 ntBASIC1.95□□□□□ -2.1
MMP2P08253 AL355796.1-201ENST00000406706 323 ntBASIC1.95□□□□□ -2.1
MMP2P08253 RNU6-1199P-201ENST00000411249 104 ntBASIC1.95□□□□□ -2.1
MMP2P08253 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms