Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 MIR8057-201ENST00000620957 69 ntBASIC3.33□□□□□ -1.88
PDGFAP04085 AP000553.6-201ENST00000641242 118 ntBASIC3.33□□□□□ -1.88
PDGFAP04085 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.33□□□□□ -1.88
PDGFAP04085 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.32□□□□□ -1.88
PDGFAP04085 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
PDGFAP04085 PWAR6-201ENST00000552334 4618 ntBASIC3.32□□□□□ -1.88
PDGFAP04085 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.32□□□□□ -1.88
PDGFAP04085 Y_RNA.120-201ENST00000363304 110 ntBASIC3.32□□□□□ -1.88
PDGFAP04085 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
PDGFAP04085 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
PDGFAP04085 SNORA48.8-201ENST00000391324 134 ntBASIC3.32□□□□□ -1.88
PDGFAP04085 RPL39P40-201ENST00000445481 146 ntBASIC3.32□□□□□ -1.88
PDGFAP04085 RPS27P29-201ENST00000463110 252 ntBASIC3.32□□□□□ -1.88
PDGFAP04085 RN7SL807P-201ENST00000470923 297 ntBASIC3.32□□□□□ -1.88
PDGFAP04085 AC018868.1-201ENST00000491307 315 ntBASIC3.32□□□□□ -1.88
PDGFAP04085 RNU6-919P-201ENST00000516731 104 ntBASIC3.32□□□□□ -1.88
PDGFAP04085 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.32□□□□□ -1.88
PDGFAP04085 AC131055.1-201ENST00000584626 316 ntBASIC3.32□□□□□ -1.88
PDGFAP04085 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.32□□□□□ -1.88
PDGFAP04085 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
PDGFAP04085 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PDGFAP04085 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.31□□□□□ -1.88
PDGFAP04085 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PDGFAP04085 Y_RNA.99-201ENST00000363138 105 ntBASIC3.31□□□□□ -1.88
PDGFAP04085 SNORA25B-201ENST00000365507 128 ntBASIC3.31□□□□□ -1.88
PDGFAP04085 Y_RNA.563-201ENST00000384707 108 ntBASIC3.31□□□□□ -1.88
PDGFAP04085 AC104332.2-201ENST00000429959 156 ntBASIC3.31□□□□□ -1.88
PDGFAP04085 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.31□□□□□ -1.88
PDGFAP04085 RN7SL442P-201ENST00000473804 320 ntBASIC3.31□□□□□ -1.88
PDGFAP04085 AC092185.1-201ENST00000491371 97 ntBASIC3.31□□□□□ -1.88
PDGFAP04085 RNU6-1041P-201ENST00000516254 102 ntBASIC3.31□□□□□ -1.88
PDGFAP04085 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.31□□□□□ -1.88
PDGFAP04085 AL353149.1-201ENST00000610667 244 ntBASIC3.31□□□□□ -1.88
PDGFAP04085 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.31□□□□□ -1.88
PDGFAP04085 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PDGFAP04085 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
PDGFAP04085 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.3□□□□□ -1.88
PDGFAP04085 RNA5SP125-201ENST00000364843 120 ntBASIC3.3□□□□□ -1.88
PDGFAP04085 SNORD18B-201ENST00000365659 72 ntBASIC3.3□□□□□ -1.88
PDGFAP04085 RNU6-1056P-201ENST00000383996 107 ntBASIC3.3□□□□□ -1.88
PDGFAP04085 SNORD17-201ENST00000390930 237 ntBASIC3.3□□□□□ -1.88
PDGFAP04085 AL035461.1-201ENST00000421490 332 ntBASIC3.3□□□□□ -1.88
PDGFAP04085 NDUFB1P1-201ENST00000435191 180 ntBASIC3.3□□□□□ -1.88
PDGFAP04085 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.3□□□□□ -1.88
PDGFAP04085 AC233266.1-201ENST00000454518 96 ntBASIC3.3□□□□□ -1.88
PDGFAP04085 HMGN1P7-201ENST00000491722 313 ntBASIC3.3□□□□□ -1.88
PDGFAP04085 AC091826.1-201ENST00000514065 313 ntBASIC3.3□□□□□ -1.88
PDGFAP04085 RNU6-365P-201ENST00000517113 106 ntBASIC3.3□□□□□ -1.88
PDGFAP04085 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.3□□□□□ -1.88
PDGFAP04085 AC091178.2-201ENST00000584401 117 ntBASIC3.3□□□□□ -1.88
PDGFAP04085 AC242852.1-201ENST00000612151 96 ntBASIC3.3□□□□□ -1.88
PDGFAP04085 MIR7112-201ENST00000616126 65 ntBASIC3.3□□□□□ -1.88
PDGFAP04085 AL449363.1-201ENST00000617815 186 ntBASIC3.3□□□□□ -1.88
PDGFAP04085 AC244015.1-201ENST00000622301 99 ntBASIC3.3□□□□□ -1.88
PDGFAP04085 MIR338-201ENST00000636369 67 ntBASIC3.3□□□□□ -1.88
PDGFAP04085 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PDGFAP04085 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.3□□□□□ -1.88
PDGFAP04085 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PDGFAP04085 AC018630.2-201ENST00000534866 2403 ntBASIC3.3□□□□□ -1.88
PDGFAP04085 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
PDGFAP04085 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PDGFAP04085 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.29□□□□□ -1.88
PDGFAP04085 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PDGFAP04085 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PDGFAP04085 U8.1-201ENST00000362843 134 ntBASIC3.29□□□□□ -1.88
PDGFAP04085 SNORA38.1-201ENST00000364172 131 ntBASIC3.29□□□□□ -1.88
PDGFAP04085 RNU6-1325P-201ENST00000364905 105 ntBASIC3.29□□□□□ -1.88
PDGFAP04085 RNU6-805P-201ENST00000365643 106 ntBASIC3.29□□□□□ -1.88
PDGFAP04085 RNA5SP293-201ENST00000410527 113 ntBASIC3.29□□□□□ -1.88
PDGFAP04085 EDDM3CP-201ENST00000415977 425 ntBASIC3.29□□□□□ -1.88
PDGFAP04085 AC018634.1-201ENST00000437554 401 ntBASIC3.29□□□□□ -1.88
PDGFAP04085 RNU1-131P-201ENST00000458943 161 ntBASIC3.29□□□□□ -1.88
PDGFAP04085 RNU7-107P-201ENST00000459121 61 ntBASIC3.29□□□□□ -1.88
PDGFAP04085 AC010401.1-201ENST00000463867 348 ntBASIC3.29□□□□□ -1.88
PDGFAP04085 RNU1-142P-201ENST00000516682 145 ntBASIC3.29□□□□□ -1.88
PDGFAP04085 RNU7-128P-201ENST00000517247 62 ntBASIC3.29□□□□□ -1.88
PDGFAP04085 U4.6-201ENST00000621618 127 ntBASIC3.29□□□□□ -1.88
PDGFAP04085 SCARNA15.3-201ENST00000626315 122 ntBASIC3.29□□□□□ -1.88
PDGFAP04085 SCARNA4.1-201ENST00000628597 123 ntBASIC3.29□□□□□ -1.88
PDGFAP04085 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
PDGFAP04085 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.29□□□□□ -1.88
PDGFAP04085 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.29□□□□□ -1.88
PDGFAP04085 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PDGFAP04085 AL021368.2-201ENST00000606125 5352 ntBASIC3.28□□□□□ -1.88
PDGFAP04085 RNU6-160P-201ENST00000384591 107 ntBASIC3.28□□□□□ -1.88
PDGFAP04085 RNA5SP467-201ENST00000391274 118 ntBASIC3.28□□□□□ -1.88
PDGFAP04085 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.28□□□□□ -1.88
PDGFAP04085 RN7SL636P-201ENST00000497504 294 ntBASIC3.28□□□□□ -1.88
PDGFAP04085 RNA5SP76-201ENST00000516277 87 ntBASIC3.28□□□□□ -1.88
PDGFAP04085 SNORA18.4-201ENST00000516440 124 ntBASIC3.28□□□□□ -1.88
PDGFAP04085 RNU6-341P-201ENST00000516973 96 ntBASIC3.28□□□□□ -1.88
PDGFAP04085 AL358944.1-201ENST00000528537 144 ntBASIC3.28□□□□□ -1.88
PDGFAP04085 MIR6079-201ENST00000635807 62 ntBASIC3.28□□□□□ -1.88
PDGFAP04085 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
PDGFAP04085 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PDGFAP04085 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PDGFAP04085 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PDGFAP04085 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PDGFAP04085 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PDGFAP04085 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms